BLASTX nr result
ID: Rehmannia24_contig00020200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00020200
(472 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29222.3| unnamed protein product [Vitis vinifera] 76 5e-12
ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
gb|EOY25407.1| Tetratricopeptide repeat-like superfamily protein... 64 2e-08
ref|XP_002519901.1| pentatricopeptide repeat-containing protein,... 64 3e-08
ref|XP_006850872.1| hypothetical protein AMTR_s00025p00148960 [A... 63 5e-08
ref|XP_002303480.2| pentatricopeptide repeat-containing family p... 62 8e-08
gb|EMT01746.1| hypothetical protein F775_05381 [Aegilops tauschii] 62 8e-08
gb|AHB18408.1| pentatricopeptide repeat-containing protein [Goss... 61 2e-07
ref|XP_006384483.1| hypothetical protein POPTR_0004s15480g [Popu... 61 2e-07
ref|XP_002330266.1| predicted protein [Populus trichocarpa] 61 2e-07
gb|EXC05161.1| hypothetical protein L484_003967 [Morus notabilis] 60 4e-07
ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citr... 58 1e-06
ref|XP_003556634.2| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indi... 57 2e-06
ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 57 3e-06
ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_006423135.1| hypothetical protein CICLE_v10030406mg [Citr... 57 3e-06
ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [S... 57 3e-06
>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/61 (54%), Positives = 46/61 (75%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KGI PD+VT NVLT+GFCKEG +EE F + D+MS +G+ LD++ +T+LVH Q S + N
Sbjct: 765 KGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALTN 824
Query: 289 E 287
+
Sbjct: 825 Q 825
>ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum lycopersicum]
Length = 839
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KG TPDSVT NVLT G KEG +EEAFSL DH+S G+ LD+V +TSLV+ + Q+S N
Sbjct: 778 KGNTPDSVTYNVLTKGLLKEGEIEEAFSLLDHISHTGVGLDEVTYTSLVNLLPQRSASAN 837
Query: 289 E 287
+
Sbjct: 838 Q 838
>ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum tuberosum]
Length = 928
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KG TPDSVT NVLT G KEG +EEAFS DH+S G+ LD+V +TSLV+ + Q+S N
Sbjct: 867 KGNTPDSVTYNVLTKGLLKEGEIEEAFSFLDHISHTGVGLDEVTYTSLVNLLPQRSASAN 926
Query: 289 E 287
+
Sbjct: 927 Q 927
>gb|EOY25407.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|508778152|gb|EOY25408.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778153|gb|EOY25409.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778154|gb|EOY25410.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778155|gb|EOY25411.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778156|gb|EOY25412.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 845
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = -1
Query: 466 GITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVH 320
GI PD VT N T+G CKEG VE+AF + DHM+ +G+ LD++ +T+L+H
Sbjct: 785 GIVPDVVTYNAFTNGLCKEGRVEDAFKVCDHMASEGLPLDEITYTTLIH 833
>ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540947|gb|EEF42505.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 777
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLV 323
KGI PD+VT N LT+GFCKEG +EEA + D MS GI LDD+ +T+L+
Sbjct: 716 KGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
>ref|XP_006850872.1| hypothetical protein AMTR_s00025p00148960 [Amborella trichopoda]
gi|548854543|gb|ERN12453.1| hypothetical protein
AMTR_s00025p00148960 [Amborella trichopoda]
Length = 839
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVH 320
KG+ PD VT N L +GFCKEG ++ AF + D MS +G+ DDV++T+LVH
Sbjct: 752 KGVAPDLVTYNALIYGFCKEGNMDGAFKICDQMSQRGLVFDDVSYTTLVH 801
>ref|XP_002303480.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342907|gb|EEE78459.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 842
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KGI PD+VT N T+G CKEG VEEAF + D MS + LD++ +T+L+ Q S N
Sbjct: 781 KGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQPSTATN 840
Query: 289 E 287
+
Sbjct: 841 Q 841
>gb|EMT01746.1| hypothetical protein F775_05381 [Aegilops tauschii]
Length = 503
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KG+ PD+ T N+L +G+CKEG ++A +++HM+ KGI V +TSL++ +S++ +E
Sbjct: 262 KGLAPDAFTYNILINGYCKEGKEKKAMKMFEHMAAKGICTTVVTYTSLIYALSKKGMVEE 321
Query: 289 E*PCF--RTRRLDHPTDLRINLLVSDSC 212
F RR P + N L++ C
Sbjct: 322 ADRLFDEAVRRGIRPDLVMYNALINSHC 349
>gb|AHB18408.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 846
Score = 60.8 bits (146), Expect = 2e-07
Identities = 24/50 (48%), Positives = 38/50 (76%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVH 320
+GI PD+VT N +G CKEG V++AF + D+M+ +G+ LDD+ +T+L+H
Sbjct: 794 RGIAPDAVTYNAFMNGICKEGRVDDAFRVCDNMNSEGLALDDITYTTLIH 843
>ref|XP_006384483.1| hypothetical protein POPTR_0004s15480g [Populus trichocarpa]
gi|550341101|gb|ERP62280.1| hypothetical protein
POPTR_0004s15480g [Populus trichocarpa]
Length = 524
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KG+ PDSVT N+L +G+C+ G V++AF+L D M KGI V +TSL++ +S++ ++
Sbjct: 286 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 345
Query: 289 E*PCFR--TRRLDHPTDLRINLLVSDSC 212
F R+ P + N L+ C
Sbjct: 346 ADDLFEKIVRKGIFPDLIMFNALIDGHC 373
>ref|XP_002330266.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KG+ PDSVT N+L +G+C+ G V++AF+L D M KGI V +TSL++ +S++ ++
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 419
Query: 289 E*PCFR--TRRLDHPTDLRINLLVSDSC 212
F R+ P + N L+ C
Sbjct: 420 ADDLFEKIVRKGIFPDLIMFNALIDGHC 447
>gb|EXC05161.1| hypothetical protein L484_003967 [Morus notabilis]
Length = 634
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIE 293
KGI PD +T N+L +G C+ G E+AF+L D M KGI V +TSLV+ +S+Q +E
Sbjct: 396 KGIVPDGITYNILINGCCRCGKAEKAFALHDEMLSKGIEATRVTYTSLVYVLSRQKRME 454
>ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KG+ PD+ T N+L +G+CKEG ++A +++ M KGI V +TSL+H +S + ++
Sbjct: 283 KGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQE 342
Query: 289 E*PCFR--TRRLDHPTDLRINLLVSDSC 212
F RR P N L++ C
Sbjct: 343 TDRLFNDAVRRGIRPDLFMYNALINSHC 370
>ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citrus clementina]
gi|568835123|ref|XP_006471629.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568835125|ref|XP_006471630.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|557534991|gb|ESR46109.1| hypothetical protein
CICLE_v10000274mg [Citrus clementina]
Length = 833
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KGI+PDS+T NV G CK G VEEAF + D M +G+ LD++ +T+L+ Q S I N
Sbjct: 771 KGISPDSITYNVFMDGHCKGGNVEEAFKVCDRMLSEGLSLDEITYTTLIDGW-QSSTITN 829
Query: 289 E 287
+
Sbjct: 830 Q 830
>ref|XP_003556634.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like isoform X1 [Glycine max]
gi|571563372|ref|XP_006605469.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g39710-like isoform X2 [Glycine max]
Length = 778
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KG+ PD VT N L +GFCKEG + + L M KG+ + V +T+L++CM + +
Sbjct: 327 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 386
Query: 289 E*PCFRTRRLD--HPTDLRINLLVSDSCLAHLERSLYDQVSDI*NSRF 152
F R+ P + L+ C L Y +S++ S F
Sbjct: 387 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF 434
>gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIEN 290
KG+ PD T N+L +G CKEG V++A ++++MS +G+ V +TSL++ +S++ +++
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 267
Query: 289 E*PCF--RTRRLDHPTDLRINLLV-SDSCLAHLERS 191
F RR P + N L+ S S +++R+
Sbjct: 268 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 303
>ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = -1
Query: 466 GITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVH 320
GI PD VT NVLT+GFCK ++ AF + D M+ +G+ +D++ +T+LVH
Sbjct: 740 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVH 788
>ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = -1
Query: 466 GITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVH 320
GI PD VT NVLT+GFCK ++ AF + D M+ +G+ +D++ +T+LVH
Sbjct: 763 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVH 811
>ref|XP_006423135.1| hypothetical protein CICLE_v10030406mg [Citrus clementina]
gi|568851376|ref|XP_006479369.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Citrus sinensis]
gi|557525069|gb|ESR36375.1| hypothetical protein
CICLE_v10030406mg [Citrus clementina]
Length = 645
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = -1
Query: 469 KGITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEI 296
KGI PDS+T N+L +G+C+ G ++AFSL D M KGI + +TSL+ +S+Q+ +
Sbjct: 407 KGIVPDSITYNILINGYCRCGNAKKAFSLHDEMIHKGIQPTMLTYTSLIFVLSKQNRM 464
>ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein
SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/87 (29%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = -1
Query: 466 GITPDSVTDNVLTHGFCKEGAVEEAFSLWDHMSDKGIHLDDVAHTSLVHCMSQQSEIENE 287
G++PD T N+L +G+CKEG ++A +++ MS KG+ V +TSL++ S++ +++
Sbjct: 284 GLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQET 343
Query: 286 *PCFR--TRRLDHPTDLRINLLVSDSC 212
F+ ++ P + N L++ C
Sbjct: 344 DRLFKVAVKKGIRPDVVMYNALINSHC 370