BLASTX nr result

ID: Rehmannia24_contig00020175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00020175
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347939.1| PREDICTED: poly(rC)-binding protein 4-like [...   105   8e-21
ref|XP_004229760.1| PREDICTED: poly(rC)-binding protein 4-like [...   103   2e-20
gb|EPS60551.1| hypothetical protein M569_14252 [Genlisea aurea]        99   8e-19
gb|EOX96436.1| RNA-binding KH domain-containing protein isoform ...    97   2e-18
gb|EOX96435.1| RNA-binding KH domain-containing protein isoform ...    97   2e-18
ref|XP_006587798.1| PREDICTED: KH domain-containing protein At4g...    94   2e-17
ref|XP_003552465.2| PREDICTED: poly(rC)-binding protein 4-like [...    92   7e-17
ref|XP_006445392.1| hypothetical protein CICLE_v10021057mg [Citr...    92   9e-17
ref|XP_006445391.1| hypothetical protein CICLE_v10021057mg [Citr...    92   9e-17
ref|XP_006445390.1| hypothetical protein CICLE_v10021057mg [Citr...    92   9e-17
gb|EMJ03381.1| hypothetical protein PRUPE_ppa026309mg, partial [...    92   9e-17
ref|XP_006375107.1| hypothetical protein POPTR_0014s04450g [Popu...    91   2e-16
ref|XP_002327061.1| predicted protein [Populus trichocarpa] gi|5...    91   2e-16
emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]    89   6e-16
gb|ESW11688.1| hypothetical protein PHAVU_008G051300g [Phaseolus...    89   8e-16
ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g...    89   8e-16
emb|CBI16638.3| unnamed protein product [Vitis vinifera]               89   8e-16
emb|CAN66855.1| hypothetical protein VITISV_039970 [Vitis vinifera]    89   8e-16
ref|XP_002511610.1| conserved hypothetical protein [Ricinus comm...    88   1e-15
ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [...    88   1e-15

>ref|XP_006347939.1| PREDICTED: poly(rC)-binding protein 4-like [Solanum tuberosum]
          Length = 451

 Score =  105 bits (261), Expect = 8e-21
 Identities = 58/94 (61%), Positives = 67/94 (71%), Gaps = 5/94 (5%)
 Frame = -1

Query: 268 PSDDAT---ATLKRPRXXXXXXXXXXXXXXD--VPAAKRRVAATHDLIYRIVVPSRQIGK 104
           PSD+ T   AT KRPR                 VP  K+RV  + D++YRIVVPSRQIGK
Sbjct: 39  PSDEETNRSATAKRPREEYAAGTTDEAGLLGDDVPPLKKRVKVSQDVVYRIVVPSRQIGK 98

Query: 103 VIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           VIGK+GHRIQKIRE+TKATIK+ADAI+RHEERVI
Sbjct: 99  VIGKAGHRIQKIREETKATIKVADAIARHEERVI 132


>ref|XP_004229760.1| PREDICTED: poly(rC)-binding protein 4-like [Solanum lycopersicum]
          Length = 444

 Score =  103 bits (257), Expect = 2e-20
 Identities = 58/94 (61%), Positives = 66/94 (70%), Gaps = 5/94 (5%)
 Frame = -1

Query: 268 PSDDAT---ATLKRPRXXXXXXXXXXXXXXD--VPAAKRRVAATHDLIYRIVVPSRQIGK 104
           PSDD T   AT KR R                 VP  K+RV  + D++YRIVVPSRQIGK
Sbjct: 33  PSDDETNRSATAKRSREEYAPAATDEAGLSGDDVPPLKKRVKVSQDVVYRIVVPSRQIGK 92

Query: 103 VIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           VIGK+GHRIQKIRE+TKATIK+ADAI+RHEERVI
Sbjct: 93  VIGKAGHRIQKIREETKATIKVADAIARHEERVI 126


>gb|EPS60551.1| hypothetical protein M569_14252 [Genlisea aurea]
          Length = 313

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 48/61 (78%), Positives = 55/61 (90%)
 Frame = -1

Query: 184 VPAAKRRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERV 5
           +P  KRR  ATHD++YRIVVP RQIGKVIG++G+RIQKIRED KATIKIADAISR+EERV
Sbjct: 55  LPVEKRRAKATHDVVYRIVVPPRQIGKVIGRAGNRIQKIREDAKATIKIADAISRNEERV 114

Query: 4   I 2
           I
Sbjct: 115 I 115


>gb|EOX96436.1| RNA-binding KH domain-containing protein isoform 2, partial
           [Theobroma cacao]
          Length = 280

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 55/91 (60%), Positives = 61/91 (67%)
 Frame = -1

Query: 274 PGPSDDATATLKRPRXXXXXXXXXXXXXXDVPAAKRRVAATHDLIYRIVVPSRQIGKVIG 95
           P P  D   T KR R                 +A +R A + D+I+RIVVPSRQIGKVIG
Sbjct: 15  PQPQTDLFRTAKRRREEEDPAEAGDTGE----SASKRQAKSQDVIFRIVVPSRQIGKVIG 70

Query: 94  KSGHRIQKIREDTKATIKIADAISRHEERVI 2
           K+GHRIQKIREDTKATIKIADAI RHEERVI
Sbjct: 71  KAGHRIQKIREDTKATIKIADAIVRHEERVI 101


>gb|EOX96435.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
           cacao]
          Length = 361

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 55/91 (60%), Positives = 61/91 (67%)
 Frame = -1

Query: 274 PGPSDDATATLKRPRXXXXXXXXXXXXXXDVPAAKRRVAATHDLIYRIVVPSRQIGKVIG 95
           P P  D   T KR R                 +A +R A + D+I+RIVVPSRQIGKVIG
Sbjct: 31  PQPQTDLFRTAKRRREEEDPAEAGDTGE----SASKRQAKSQDVIFRIVVPSRQIGKVIG 86

Query: 94  KSGHRIQKIREDTKATIKIADAISRHEERVI 2
           K+GHRIQKIREDTKATIKIADAI RHEERVI
Sbjct: 87  KAGHRIQKIREDTKATIKIADAIVRHEERVI 117


>ref|XP_006587798.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Glycine max]
          Length = 386

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 50/59 (84%), Positives = 53/59 (89%)
 Frame = -1

Query: 178 AAKRRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           AAKR  A   D+I+RIVVPSRQIGKVIGK GHRIQKIREDTKATIKIADAI+RHEERVI
Sbjct: 93  AAKR--AKGQDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVI 149


>ref|XP_003552465.2| PREDICTED: poly(rC)-binding protein 4-like [Glycine max]
          Length = 362

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 49/59 (83%), Positives = 52/59 (88%)
 Frame = -1

Query: 178 AAKRRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           AAKR  A   D+I+RIVVPSR IGKVIGK GHRIQKIREDTKATIKIADAI+RHEERVI
Sbjct: 67  AAKR--AKGQDVIFRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVI 123


>ref|XP_006445392.1| hypothetical protein CICLE_v10021057mg [Citrus clementina]
           gi|568819829|ref|XP_006464447.1| PREDICTED:
           poly(rC)-binding protein 4-like isoform X2 [Citrus
           sinensis] gi|568819831|ref|XP_006464448.1| PREDICTED:
           poly(rC)-binding protein 4-like isoform X3 [Citrus
           sinensis] gi|568819833|ref|XP_006464449.1| PREDICTED:
           poly(rC)-binding protein 4-like isoform X4 [Citrus
           sinensis] gi|557547654|gb|ESR58632.1| hypothetical
           protein CICLE_v10021057mg [Citrus clementina]
          Length = 330

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = -1

Query: 169 RRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           +R A   D+++RI+VPSRQIGKVIGK GHRIQKIRE+TKATIKIADAI+RHEERVI
Sbjct: 42  KRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVI 97


>ref|XP_006445391.1| hypothetical protein CICLE_v10021057mg [Citrus clementina]
           gi|568819827|ref|XP_006464446.1| PREDICTED:
           poly(rC)-binding protein 4-like isoform X1 [Citrus
           sinensis] gi|557547653|gb|ESR58631.1| hypothetical
           protein CICLE_v10021057mg [Citrus clementina]
          Length = 334

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = -1

Query: 169 RRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           +R A   D+++RI+VPSRQIGKVIGK GHRIQKIRE+TKATIKIADAI+RHEERVI
Sbjct: 42  KRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVI 97


>ref|XP_006445390.1| hypothetical protein CICLE_v10021057mg [Citrus clementina]
           gi|567905810|ref|XP_006445393.1| hypothetical protein
           CICLE_v10021057mg [Citrus clementina]
           gi|557547652|gb|ESR58630.1| hypothetical protein
           CICLE_v10021057mg [Citrus clementina]
           gi|557547655|gb|ESR58633.1| hypothetical protein
           CICLE_v10021057mg [Citrus clementina]
          Length = 257

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = -1

Query: 169 RRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           +R A   D+++RI+VPSRQIGKVIGK GHRIQKIRE+TKATIKIADAI+RHEERVI
Sbjct: 42  KRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVI 97


>gb|EMJ03381.1| hypothetical protein PRUPE_ppa026309mg, partial [Prunus persica]
          Length = 324

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 55/91 (60%), Positives = 61/91 (67%)
 Frame = -1

Query: 274 PGPSDDATATLKRPRXXXXXXXXXXXXXXDVPAAKRRVAATHDLIYRIVVPSRQIGKVIG 95
           PG     +A LKR R              + P AKRR  A  D+I+RIVVPSRQIGKVIG
Sbjct: 24  PGSEPAQSAALKRRREDEYPPVLAGPEPQE-PGAKRRAKA-QDVIFRIVVPSRQIGKVIG 81

Query: 94  KSGHRIQKIREDTKATIKIADAISRHEERVI 2
           K G RIQKIRE+TKA IKIADAI+RHEERVI
Sbjct: 82  KEGCRIQKIREETKANIKIADAIARHEERVI 112


>ref|XP_006375107.1| hypothetical protein POPTR_0014s04450g [Populus trichocarpa]
           gi|550323423|gb|ERP52904.1| hypothetical protein
           POPTR_0014s04450g [Populus trichocarpa]
          Length = 336

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/59 (79%), Positives = 53/59 (89%)
 Frame = -1

Query: 178 AAKRRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           AAKR+  A  D+I+RIVVPS +IGKVIGK GHRIQKIREDTKATIKIADA++RHEERVI
Sbjct: 42  AAKRQARA--DVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVI 98


>ref|XP_002327061.1| predicted protein [Populus trichocarpa]
           gi|566202473|ref|XP_006375108.1| hypothetical protein
           POPTR_0014s04450g [Populus trichocarpa]
           gi|550323424|gb|ERP52905.1| hypothetical protein
           POPTR_0014s04450g [Populus trichocarpa]
          Length = 357

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/59 (79%), Positives = 53/59 (89%)
 Frame = -1

Query: 178 AAKRRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           AAKR+  A  D+I+RIVVPS +IGKVIGK GHRIQKIREDTKATIKIADA++RHEERVI
Sbjct: 42  AAKRQARA--DVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVI 98


>emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
          Length = 321

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
 Frame = -1

Query: 274 PGPSDDATATLKRPRXXXXXXXXXXXXXXDVP-AAKRRVAATHDLIYRIVVPSRQIGKVI 98
           P PS+  + ++KRPR                   + +R A   D+++RIVVPSRQIGKVI
Sbjct: 18  PAPSE--STSMKRPRDDDGGVIASATGEVADDHRSPKRRAKNQDVLFRIVVPSRQIGKVI 75

Query: 97  GKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           GK G RIQKIRE+TKATIKIADAI+RHEERVI
Sbjct: 76  GKEGSRIQKIREETKATIKIADAIARHEERVI 107


>gb|ESW11688.1| hypothetical protein PHAVU_008G051300g [Phaseolus vulgaris]
          Length = 379

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 48/59 (81%), Positives = 52/59 (88%)
 Frame = -1

Query: 178 AAKRRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           AAKR  A   D+I+RIVVPSRQIGKVIGK G RIQ+IREDTKATIKIADAI+RHEERVI
Sbjct: 86  AAKR--AKGQDVIFRIVVPSRQIGKVIGKEGCRIQRIREDTKATIKIADAIARHEERVI 142


>ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 343

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/56 (78%), Positives = 50/56 (89%)
 Frame = -1

Query: 169 RRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           +R A   D+++RIVVPSRQIGKVIGK G RIQKIRE+TKATIKIADAI+RHEERVI
Sbjct: 52  KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVI 107


>emb|CBI16638.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/56 (78%), Positives = 50/56 (89%)
 Frame = -1

Query: 169 RRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           +R A   D+++RIVVPSRQIGKVIGK G RIQKIRE+TKATIKIADAI+RHEERVI
Sbjct: 52  KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVI 107


>emb|CAN66855.1| hypothetical protein VITISV_039970 [Vitis vinifera]
          Length = 153

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/56 (78%), Positives = 50/56 (89%)
 Frame = -1

Query: 169 RRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           +R A   D+++RIVVPSRQIGKVIGK G RIQKIRE+TKATIKIADAI+RHEERVI
Sbjct: 52  KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVI 107


>ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
           gi|223548790|gb|EEF50279.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 48/59 (81%), Positives = 52/59 (88%)
 Frame = -1

Query: 178 AAKRRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           AAKR  A   D+I+RIVVPSRQIGKVIGK G RIQKIRE+TKATIKIADAI+RHEERVI
Sbjct: 62  AAKR--AKAQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVI 118


>ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
           gi|449529952|ref|XP_004171961.1| PREDICTED:
           poly(rC)-binding protein 2-like [Cucumis sativus]
          Length = 276

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/59 (71%), Positives = 53/59 (89%)
 Frame = -1

Query: 178 AAKRRVAATHDLIYRIVVPSRQIGKVIGKSGHRIQKIREDTKATIKIADAISRHEERVI 2
           +A +R A  HD+++RIVVPS+QIGKVIGK G RIQK+RE+TKATIKIADA++R+EERVI
Sbjct: 58  SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI 116


Top