BLASTX nr result
ID: Rehmannia24_contig00020138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00020138
(495 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004304288.1| PREDICTED: polypyrimidine tract-binding prot... 69 9e-10
gb|EXB31948.1| Polypyrimidine tract-binding protein-1-like prote... 64 2e-08
gb|EMJ16489.1| hypothetical protein PRUPE_ppa004961mg [Prunus pe... 64 2e-08
ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot... 62 8e-08
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot... 62 8e-08
ref|XP_006384308.1| hypothetical protein POPTR_0004s12210g [Popu... 60 3e-07
gb|ABK95931.1| unknown [Populus trichocarpa] 60 3e-07
ref|XP_006431186.1| hypothetical protein CICLE_v10011680mg [Citr... 60 4e-07
ref|XP_002533124.1| polypyrimidine tract binding protein, putati... 58 1e-06
ref|XP_002324068.1| hypothetical protein POPTR_0017s12160g [Popu... 57 3e-06
ref|XP_006482618.1| PREDICTED: polypyrimidine tract-binding prot... 57 3e-06
>ref|XP_004304288.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Fragaria vesca subsp. vesca]
Length = 470
Score = 68.6 bits (166), Expect = 9e-10
Identities = 55/140 (39%), Positives = 62/140 (44%), Gaps = 31/140 (22%)
Frame = -1
Query: 495 AYSDKSRDYTIPLSLAMQQTPGVP----------------GVGYASGSVGPGQASMT--- 373
AYSDKSRDYTIP + + G P G Y++ + GP +
Sbjct: 329 AYSDKSRDYTIPDASLLAVQSGYPAAPAAWQNAQASPVYHGNEYSAAAAGPAEGPPGGPP 388
Query: 372 -QVSSWDPAAPAGRPNFVSVPSTFPGQXXXXXXXXXXXXXXXXPFGS-----PGF-PQMR 214
QV SWDP AGRP+FVSVPSTFPGQ P GS PG P MR
Sbjct: 389 GQVPSWDPNMQAGRPSFVSVPSTFPGQIYPTSSGGPVYASAPMPPGSSPMHQPGAPPHMR 448
Query: 213 --GAQP---MQPSNMPPYYG 169
GA P P P YYG
Sbjct: 449 PGGASPPGVRPPGASPSYYG 468
>gb|EXB31948.1| Polypyrimidine tract-binding protein-1-like protein [Morus
notabilis]
Length = 484
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/85 (47%), Positives = 44/85 (51%), Gaps = 18/85 (21%)
Frame = -1
Query: 495 AYSDKSRDYTIPLS--LAMQQTPGVP----------------GVGYASGSVGPGQASMTQ 370
AYSDKSRDYTIP + LA QQ PGVP G Y + + GQ Q
Sbjct: 329 AYSDKSRDYTIPDASLLAAQQIPGVPATPPLWQNPQAAPLYPGNEYGAAAAVQGQIPPGQ 388
Query: 369 VSSWDPAAPAGRPNFVSVPSTFPGQ 295
V WDP AGR +VS PSTF GQ
Sbjct: 389 VPPWDPTMQAGRSTYVSSPSTFRGQ 413
>gb|EMJ16489.1| hypothetical protein PRUPE_ppa004961mg [Prunus persica]
Length = 483
Score = 64.3 bits (155), Expect = 2e-08
Identities = 43/85 (50%), Positives = 46/85 (54%), Gaps = 18/85 (21%)
Frame = -1
Query: 495 AYSDKSRDYTIPLS--LAMQQTPGVPGVGYA----------SGSVGPGQASMT------Q 370
A+SDKSRDYTIP + LA QQ G P A G+ G ASM Q
Sbjct: 329 AFSDKSRDYTIPEASLLAAQQVSGYPAAPAAWQNPQAAPMYHGNEFSGAASMQAQGPPGQ 388
Query: 369 VSSWDPAAPAGRPNFVSVPSTFPGQ 295
SWDPA AGR FVSVPSTFPGQ
Sbjct: 389 GPSWDPAMQAGRSTFVSVPSTFPGQ 413
>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
[Vitis vinifera]
Length = 420
Score = 62.0 bits (149), Expect = 8e-08
Identities = 43/120 (35%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Frame = -1
Query: 495 AYSDKSRDYTIPLS--LAMQQTPGVPGVG--YASGSVGP-------GQASMTQVSSWDPA 349
A+SD+SRDYTIP S LA+QQ PG PG + + P A+ QV SWDP
Sbjct: 300 AHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTGHDAAAAAAVQVPSWDPN 359
Query: 348 APAGRPNFVSVPSTFPGQXXXXXXXXXXXXXXXXPFGSPGFPQMRGAQPMQPSNMPPYYG 169
AGR F S S FP Q +P P P PPY+G
Sbjct: 360 MQAGRSTFASAASAFPSQPFASSSISAYPAPPGSSPLTPAVPPNVRPGGASPPGRPPYFG 419
>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
[Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
protein product [Vitis vinifera]
Length = 449
Score = 62.0 bits (149), Expect = 8e-08
Identities = 43/120 (35%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Frame = -1
Query: 495 AYSDKSRDYTIPLS--LAMQQTPGVPGVG--YASGSVGP-------GQASMTQVSSWDPA 349
A+SD+SRDYTIP S LA+QQ PG PG + + P A+ QV SWDP
Sbjct: 329 AHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTGHDAAAAAAVQVPSWDPN 388
Query: 348 APAGRPNFVSVPSTFPGQXXXXXXXXXXXXXXXXPFGSPGFPQMRGAQPMQPSNMPPYYG 169
AGR F S S FP Q +P P P PPY+G
Sbjct: 389 MQAGRSTFASAASAFPSQPFASSSISAYPAPPGSSPLTPAVPPNVRPGGASPPGRPPYFG 448
>ref|XP_006384308.1| hypothetical protein POPTR_0004s12210g [Populus trichocarpa]
gi|550340880|gb|ERP62105.1| hypothetical protein
POPTR_0004s12210g [Populus trichocarpa]
Length = 473
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/84 (42%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Frame = -1
Query: 495 AYSDKSRDYTIP-LSLAMQQTPGV----------------PGVGYASGSVGPGQASMTQV 367
AYSDKSRDYTIP SL Q PG+ G YA+ + P Q QV
Sbjct: 329 AYSDKSRDYTIPDASLIAAQAPGLHTAPTMWQNPQAGSMYTGNNYATTAAVPVQVPPGQV 388
Query: 366 SSWDPAAPAGRPNFVSVPSTFPGQ 295
+WDP AG + SVP T+PGQ
Sbjct: 389 PAWDPTMQAGGQGYASVPGTYPGQ 412
>gb|ABK95931.1| unknown [Populus trichocarpa]
Length = 473
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/84 (42%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Frame = -1
Query: 495 AYSDKSRDYTIP-LSLAMQQTPGV----------------PGVGYASGSVGPGQASMTQV 367
AYSDKSRDYTIP SL Q PG+ G YA+ + P Q QV
Sbjct: 329 AYSDKSRDYTIPDASLIAAQAPGLHTAPTMWQNPQAGSMYTGNNYATTAAVPVQVPPGQV 388
Query: 366 SSWDPAAPAGRPNFVSVPSTFPGQ 295
+WDP AG + SVP T+PGQ
Sbjct: 389 PAWDPTMQAGGQGYASVPGTYPGQ 412
>ref|XP_006431186.1| hypothetical protein CICLE_v10011680mg [Citrus clementina]
gi|557533243|gb|ESR44426.1| hypothetical protein
CICLE_v10011680mg [Citrus clementina]
Length = 459
Score = 59.7 bits (143), Expect = 4e-07
Identities = 44/129 (34%), Positives = 51/129 (39%), Gaps = 21/129 (16%)
Frame = -1
Query: 495 AYSDKSRDYTIP--LSLAMQQTPGVPGV--------------GYASGSVGPGQASMTQVS 364
AYSDKSRDYT+ LA QQ P VP G + PGQ QV
Sbjct: 329 AYSDKSRDYTVQDQTLLATQQIPSVPAAPSVWQSHQAAPMYSGSEYATAVPGQVPPGQVP 388
Query: 363 SWDPAAPAGRPNFVSVPSTFPGQXXXXXXXXXXXXXXXXPFGSPGFPQMRGAQPMQPSNM 184
SW+P+A AG +VS FPGQ SP G P++P
Sbjct: 389 SWNPSAQAGPAAYVSASGHFPGQTYPQSPVSAYATAPTPTGSSPLSLTQPGVPPVRPGGA 448
Query: 183 -----PPYY 172
PPYY
Sbjct: 449 SPPGHPPYY 457
>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
protein, putative [Ricinus communis]
Length = 483
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/86 (44%), Positives = 44/86 (51%), Gaps = 19/86 (22%)
Frame = -1
Query: 495 AYSDKSRDYTIPLS--LAMQQTPGVPGV----------------GYASGSVGPGQASMTQ 370
AYSDKSRDYTIP + LA Q PGVP YAS + Q Q
Sbjct: 337 AYSDKSRDYTIPDASLLAAGQVPGVPTAPTMWQNPQASPMYPVNSYASAAAVTAQVPAGQ 396
Query: 369 VSSWDPAAPAGRPNFVSV-PSTFPGQ 295
V +W+P+ AG P + SV P TFPGQ
Sbjct: 397 VPAWNPSMEAGGPAYPSVPPGTFPGQ 422
>ref|XP_002324068.1| hypothetical protein POPTR_0017s12160g [Populus trichocarpa]
gi|222867070|gb|EEF04201.1| hypothetical protein
POPTR_0017s12160g [Populus trichocarpa]
Length = 476
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Frame = -1
Query: 495 AYSDKSRDYTIP-LSLAMQQTPGVP----------------GVGYASGSVGPGQASMTQV 367
A+SDKSRDYTIP S Q PG+ G YA+ + P Q QV
Sbjct: 333 AFSDKSRDYTIPDASFLTAQAPGLHTAPTTWQNPQAGSMYLGSNYATTAAAPAQVPPGQV 392
Query: 366 SSWDPAAPAGRPNFVSVPSTFPGQ 295
++WDP+ AG P + SV +PGQ
Sbjct: 393 AAWDPSMQAGGPGYSSVRGMYPGQ 416
>ref|XP_006482618.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform X1 [Citrus sinensis]
Length = 459
Score = 56.6 bits (135), Expect = 3e-06
Identities = 42/129 (32%), Positives = 50/129 (38%), Gaps = 21/129 (16%)
Frame = -1
Query: 495 AYSDKSRDYTIP--LSLAMQQTPGVPGV--------------GYASGSVGPGQASMTQVS 364
AYSDKSRDYT+ LA QQ P +P G + PGQ QV
Sbjct: 329 AYSDKSRDYTVQDQTLLATQQIPSIPAAPLVWQSHQAAPMYSGSEYATAVPGQVPPGQVP 388
Query: 363 SWDPAAPAGRPNFVSVPSTFPGQXXXXXXXXXXXXXXXXPFGSPGFPQMRGAQPMQPSNM 184
SW+P+A A +VS FPGQ SP G P++P
Sbjct: 389 SWNPSAQARPAAYVSASGPFPGQTYPQSPVSAYATAPTPTGSSPLSLTQPGVPPVRPGGA 448
Query: 183 -----PPYY 172
PPYY
Sbjct: 449 SPPGHPPYY 457