BLASTX nr result

ID: Rehmannia24_contig00019374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00019374
         (615 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154648.1| PREDICTED: F-box protein At4g18380-like [Cuc...    58   2e-06
ref|XP_004139055.1| PREDICTED: F-box protein At4g18380-like [Cuc...    58   2e-06

>ref|XP_004154648.1| PREDICTED: F-box protein At4g18380-like [Cucumis sativus]
          Length = 354

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
 Frame = +2

Query: 47  IMDAVWRYAFVESILGDFQNLKNVVVTDCMGQGRVELDEEEIDGVR-----NIGNALEDK 211
           ++ A  R+  V+ ++ DF  LK V++TD   QGR+ ++EEE+  +R     +  + +E  
Sbjct: 212 LIAASMRHYLVKQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMQLSSSSYVERS 271

Query: 212 V--DCRVRVWRLPVVKLPLSGCVMKEATLCVFKEVG----------IDDGLMAENAFEEK 355
           V  D ++++W +PV+ LP +G VM  ATL V K  G          I D   +E+  +  
Sbjct: 272 VIPDLKMKMWYVPVLDLPEAGFVMTAATLVVIKPSGGGMGLDGLERIGDEFDSEDGEKFG 331

Query: 356 EYCELAKTIMKNGACYEFKV 415
            Y E  + +MK    Y  +V
Sbjct: 332 VYGEAVRKLMKLKRNYALEV 351


>ref|XP_004139055.1| PREDICTED: F-box protein At4g18380-like [Cucumis sativus]
          Length = 354

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
 Frame = +2

Query: 47  IMDAVWRYAFVESILGDFQNLKNVVVTDCMGQGRVELDEEEIDGVR-----NIGNALEDK 211
           ++ A  R+  V+ ++ DF  LK V++TD   QGR+ ++EEE+  +R     +  + +E  
Sbjct: 212 LIAASMRHYLVKQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMQLSSSSYVERS 271

Query: 212 V--DCRVRVWRLPVVKLPLSGCVMKEATLCVFKEVG----------IDDGLMAENAFEEK 355
           V  D ++++W +PV+ LP +G VM  ATL V K  G          I D   +E+  +  
Sbjct: 272 VIPDLKMKMWYVPVLDLPEAGFVMTAATLVVIKPSGGGMGLDGLERIGDEFDSEDGEKFG 331

Query: 356 EYCELAKTIMKNGACYEFKV 415
            Y E  + +MK    Y  +V
Sbjct: 332 VYGEAVRKLMKLKRNYALEV 351


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