BLASTX nr result

ID: Rehmannia24_contig00019082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00019082
         (654 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350542.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    59   2e-06
ref|XP_004240958.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    56   8e-06

>ref|XP_006350542.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum
           tuberosum]
          Length = 314

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = -3

Query: 130 DGIEDEEIQTSVSSNPHQYSS-KRHNIVASGIAPTSVHELLECP 2
           DGIEDEEIQ S   + HQ+SS K HNI+  G+APTSVHELLECP
Sbjct: 13  DGIEDEEIQLS---HNHQFSSAKPHNILLPGLAPTSVHELLECP 53


>ref|XP_004240958.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum
           lycopersicum]
          Length = 318

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = -3

Query: 130 DGIEDEEIQTSVSSNPHQYS-SKRHNIVASGIAPTSVHELLECP 2
           DG+EDEEIQ+S++S  HQY   K +NI+++G  PTSVHELLECP
Sbjct: 16  DGVEDEEIQSSIAS--HQYPLGKPNNILSAGNVPTSVHELLECP 57


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