BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018999
         (1075 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-li...   585   e-165
ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-li...   584   e-164
gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus pe...   572   e-160
ref|XP_002304476.1| replication factor C 40 kDa family protein [...   571   e-160
ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutr...   569   e-160
ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-li...   569   e-160
ref|XP_002509739.1| replication factor C / DNA polymerase III ga...   568   e-159
gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]       568   e-159
gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao...   568   e-159
ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-li...   566   e-159
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li...   566   e-159
ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, part...   565   e-158
gb|AFK40126.1| unknown [Medicago truncatula]                          563   e-158
gb|EOY24643.1| Replication factor C / DNA polymerase III gamma-t...   562   e-158
ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arab...   561   e-157
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V...   561   e-157
ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [A...   559   e-157
gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus...   558   e-156
ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana] g...   558   e-156
dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa...   558   e-156

>ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-like [Solanum
           lycopersicum]
          Length = 331

 Score =  585 bits (1509), Expect = e-165
 Identities = 297/329 (90%), Positives = 306/329 (93%)
 Frame = -3

Query: 989 MAXXXXXSAGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT 810
           MA     S+GPEIPWVEK+RPTKV+DIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT
Sbjct: 1   MASSSSTSSGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT 60

Query: 809 TSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA 630
           TSILALAHELLGPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
Sbjct: 61  TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA 120

Query: 629 DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM 450
           DSMTSGAQQALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM
Sbjct: 121 DSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM 180

Query: 449 VVVAAEQVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV 270
            VVAAE+V YVPEGLEAIIFTADGDMRQ LNNLQAT+SGFGFVNQENVFKVCDQPHPLHV
Sbjct: 181 AVVAAEKVAYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHV 240

Query: 269 KNMVRQVIEGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFA 90
           KNMVR V+EGKFDDACAGLK LYDLGYSPTDIITTLFRIIKNYDM EY+KLEF+KETGFA
Sbjct: 241 KNMVRNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFA 300

Query: 89  HMRICDGVGSYXXXXXXXXXXXLVRETAK 3
           HMRICDGVGSY           LVRETAK
Sbjct: 301 HMRICDGVGSYLQMCGLLAKLSLVRETAK 329


>ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
          Length = 331

 Score =  584 bits (1506), Expect = e-164
 Identities = 296/329 (89%), Positives = 306/329 (93%)
 Frame = -3

Query: 989 MAXXXXXSAGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT 810
           MA     S+GPEIPWVEK+RPTKV+DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKT
Sbjct: 1   MASSSSTSSGPEIPWVEKFRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKT 60

Query: 809 TSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA 630
           TSILALAHELLGPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
Sbjct: 61  TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA 120

Query: 629 DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM 450
           DSMTSGAQQALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM
Sbjct: 121 DSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM 180

Query: 449 VVVAAEQVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV 270
            VVAAE+V YVPEGLEAIIFTADGDMRQ LNNLQAT+SGFGFVNQENVFKVCDQPHPLHV
Sbjct: 181 AVVAAEKVAYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHV 240

Query: 269 KNMVRQVIEGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFA 90
           KNMVR V+EGKFDDACAGLK LYDLGYSPTDIITTLFRIIKNYDM EY+KLEF+KETGFA
Sbjct: 241 KNMVRNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFA 300

Query: 89  HMRICDGVGSYXXXXXXXXXXXLVRETAK 3
           HMRICDGVGSY           LVRETAK
Sbjct: 301 HMRICDGVGSYLQMCGLLAKLSLVRETAK 329


>gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
          Length = 332

 Score =  572 bits (1473), Expect = e-160
 Identities = 285/318 (89%), Positives = 298/318 (93%)
 Frame = -3

Query: 956 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 777
           +IPWVEKYRP+ VADIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL
Sbjct: 13  DIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 72

Query: 776 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 597
           GPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQAL
Sbjct: 73  GPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQAL 132

Query: 596 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 417
           RRTMEIYSNSTRF LACN SSKIIEPIQSRCALVRF+RLSDQEILGRLM+VV AE+VPYV
Sbjct: 133 RRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVQAEKVPYV 192

Query: 416 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 237
           PEGLEAIIFTADGDMRQALNNLQATNSGF FVNQENVFKVCDQPHPLHVKNMV  V+EGK
Sbjct: 193 PEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVCNVLEGK 252

Query: 236 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 57
           FDDAC+GLK+LYDLGYSPTDIITT FRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 253 FDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 312

Query: 56  XXXXXXXXXXXLVRETAK 3
                      L+RETAK
Sbjct: 313 LQLCGLLAKLSLIRETAK 330


>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
           gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
           family protein [Populus trichocarpa]
          Length = 330

 Score =  571 bits (1472), Expect = e-160
 Identities = 285/318 (89%), Positives = 300/318 (94%)
 Frame = -3

Query: 956 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 777
           +IPWVEKYRP KVADIVGN+DAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL
Sbjct: 11  DIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 70

Query: 776 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 597
           GPN +EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKI+ILDEADSMTSGAQQAL
Sbjct: 71  GPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEADSMTSGAQQAL 130

Query: 596 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 417
           RRTMEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AEQVPYV
Sbjct: 131 RRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVGAEQVPYV 190

Query: 416 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 237
           PEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQENVFKVCDQPHPLHVKNMVRQV+EGK
Sbjct: 191 PEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVKNMVRQVLEGK 250

Query: 236 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 57
           FDDAC+GLK LYD+GYSPTDIITTLFRIIKNYDM EY+KLEFMKETGFAHMRICDGVGSY
Sbjct: 251 FDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRICDGVGSY 310

Query: 56  XXXXXXXXXXXLVRETAK 3
                      LVR+TA+
Sbjct: 311 LQLCGLLAKLALVRDTAR 328


>ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutrema salsugineum]
           gi|557088282|gb|ESQ29062.1| hypothetical protein
           EUTSA_v10023584mg [Eutrema salsugineum]
          Length = 333

 Score =  569 bits (1466), Expect = e-160
 Identities = 284/320 (88%), Positives = 298/320 (93%)
 Frame = -3

Query: 962 GPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 783
           G EIPWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHE
Sbjct: 12  GYEIPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 71

Query: 782 LLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 603
           LLGPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQ
Sbjct: 72  LLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 131

Query: 602 ALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVP 423
           ALRRT+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE VP
Sbjct: 132 ALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQEILGRLMVVVQAENVP 191

Query: 422 YVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIE 243
           ++PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+E
Sbjct: 192 FIPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLE 251

Query: 242 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 63
            KFDDAC G+K+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 252 SKFDDACHGMKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 311

Query: 62  SYXXXXXXXXXXXLVRETAK 3
           SY           +VRETAK
Sbjct: 312 SYLQLCGLLAKLAVVRETAK 331


>ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-like [Fragaria vesca
           subsp. vesca]
          Length = 329

 Score =  569 bits (1466), Expect = e-160
 Identities = 282/318 (88%), Positives = 298/318 (93%)
 Frame = -3

Query: 956 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 777
           ++PWVEKYRPTKV+DIVGNEDAV+RLQVIARDGNMPNLILAGPPG GKTTSILALAHELL
Sbjct: 10  DMPWVEKYRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGIGKTTSILALAHELL 69

Query: 776 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 597
           GPNYRE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQAL
Sbjct: 70  GPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQAL 129

Query: 596 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 417
           RRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RL+DQEILGRLM+VV AE+VPYV
Sbjct: 130 RRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDQEILGRLMIVVQAEKVPYV 189

Query: 416 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 237
           PEGLEAIIFTADGDMRQALNNLQATNSGF FVNQENVFKVCDQPHPLHVKNMV  ++EGK
Sbjct: 190 PEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVHNILEGK 249

Query: 236 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 57
           FDDAC+GLK+LYD+GYSPTDIITT FRIIKNYDM E+LKLEFMKETGFAHMRICDGVGSY
Sbjct: 250 FDDACSGLKQLYDMGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAHMRICDGVGSY 309

Query: 56  XXXXXXXXXXXLVRETAK 3
                      LVR+TAK
Sbjct: 310 LQLCGLLAKLSLVRDTAK 327


>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223549638|gb|EEF51126.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 333

 Score =  568 bits (1465), Expect = e-159
 Identities = 281/318 (88%), Positives = 300/318 (94%)
 Frame = -3

Query: 956 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 777
           ++PWVEKYRP+K+ DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELL
Sbjct: 14  DVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELL 73

Query: 776 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 597
           GPNY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQAL
Sbjct: 74  GPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQAL 133

Query: 596 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 417
           RRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRL++VV AE+VPYV
Sbjct: 134 RRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQAEKVPYV 193

Query: 416 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 237
           PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+EGK
Sbjct: 194 PEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEGK 253

Query: 236 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 57
           +DDAC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 254 YDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 313

Query: 56  XXXXXXXXXXXLVRETAK 3
                      LVR+TA+
Sbjct: 314 LQLCGLLAKLALVRDTAR 331


>gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]
          Length = 330

 Score =  568 bits (1464), Expect = e-159
 Identities = 286/321 (89%), Positives = 298/321 (92%)
 Frame = -3

Query: 965 AGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 786
           +G +IPWVEKYRPT V DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAH
Sbjct: 8   SGYDIPWVEKYRPTNVIDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 67

Query: 785 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 606
           ELLGPNYRE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQ
Sbjct: 68  ELLGPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQ 127

Query: 605 QALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQV 426
           QALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEIL RLMVVV AE+V
Sbjct: 128 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILVRLMVVVDAEKV 187

Query: 425 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVI 246
           PYVPEGLEAIIFTADGDMRQALNNLQAT SGF F+NQENVFKVCDQPHPLHVKNMVR V+
Sbjct: 188 PYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFLNQENVFKVCDQPHPLHVKNMVRHVL 247

Query: 245 EGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGV 66
           EGKFDDAC+GLK+LYDLGYSPTDIITT FRIIKNYDM EYLKL+FMKETGFAHMRICDGV
Sbjct: 248 EGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLQFMKETGFAHMRICDGV 307

Query: 65  GSYXXXXXXXXXXXLVRETAK 3
           GSY           LVRETAK
Sbjct: 308 GSYLQLCGLLAKLSLVRETAK 328


>gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao]
           gi|508777388|gb|EOY24644.1| Replication factor C 2
           isoform 1 [Theobroma cacao]
          Length = 332

 Score =  568 bits (1464), Expect = e-159
 Identities = 286/320 (89%), Positives = 298/320 (93%)
 Frame = -3

Query: 962 GPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 783
           G ++PWVEKYRP KV+DIVGNEDAV+RLQVIA DGNMPNLIL+GPPGTGKTTSILALAHE
Sbjct: 11  GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHE 70

Query: 782 LLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 603
           LLG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQ
Sbjct: 71  LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 130

Query: 602 ALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVP 423
           ALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE+VP
Sbjct: 131 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVP 190

Query: 422 YVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIE 243
           YVPEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+E
Sbjct: 191 YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLE 250

Query: 242 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 63
           G+FDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 251 GRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310

Query: 62  SYXXXXXXXXXXXLVRETAK 3
           SY           LVRETAK
Sbjct: 311 SYLQLCGLLAKFSLVRETAK 330


>ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-like [Cicer arietinum]
          Length = 332

 Score =  567 bits (1460), Expect = e-159
 Identities = 284/318 (89%), Positives = 297/318 (93%)
 Frame = -3

Query: 956 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 777
           ++PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPN+IL+GP GTGKTTSILALAHELL
Sbjct: 13  DVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNIILSGPSGTGKTTSILALAHELL 72

Query: 776 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 597
           GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQAL
Sbjct: 73  GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQAL 132

Query: 596 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 417
           RRTMEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+VPYV
Sbjct: 133 RRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPYV 192

Query: 416 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 237
           PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VIEG 
Sbjct: 193 PEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGN 252

Query: 236 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 57
           FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 253 FDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 312

Query: 56  XXXXXXXXXXXLVRETAK 3
                      LVRETAK
Sbjct: 313 LQMCGLLAKLSLVRETAK 330


>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
           gi|449494241|ref|XP_004159490.1| PREDICTED: replication
           factor C subunit 2-like [Cucumis sativus]
          Length = 331

 Score =  566 bits (1458), Expect = e-159
 Identities = 281/329 (85%), Positives = 302/329 (91%)
 Frame = -3

Query: 989 MAXXXXXSAGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT 810
           MA     S+  +IPWVEKYRP KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKT
Sbjct: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 809 TSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA 630
           TSILALAHELLGPNY+E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEA
Sbjct: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120

Query: 629 DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM 450
           DSMT+GAQQALRRTMEIYSN+TRF LACNTSSKIIEPIQSRCA+VRF+RL+DQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 449 VVVAAEQVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV 270
           VV+ AE+VPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQ+NVFKVCDQPHPLHV
Sbjct: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 269 KNMVRQVIEGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFA 90
           KN+VR V+EGKFDDAC GL++LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFA
Sbjct: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 89  HMRICDGVGSYXXXXXXXXXXXLVRETAK 3
           HMRICDGVGSY           +VRETAK
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAK 329


>ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, partial [Capsella rubella]
            gi|482571159|gb|EOA35347.1| hypothetical protein
            CARUB_v10020535mg, partial [Capsella rubella]
          Length = 360

 Score =  565 bits (1456), Expect = e-158
 Identities = 285/329 (86%), Positives = 300/329 (91%)
 Frame = -3

Query: 989  MAXXXXXSAGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT 810
            MA     S+G E PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKT
Sbjct: 30   MASSSSASSGGEEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKT 89

Query: 809  TSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA 630
            TSILALAHELLG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEA
Sbjct: 90   TSILALAHELLGKNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 149

Query: 629  DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM 450
            DSMTSGAQQALRRT+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSD++ILGRLM
Sbjct: 150  DSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDEQILGRLM 209

Query: 449  VVVAAEQVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV 270
            VVV AE VPYVPEGLEAIIFTADGDMRQALNNLQATNSGF  VNQENVFKVCDQPHPLHV
Sbjct: 210  VVVQAENVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRLVNQENVFKVCDQPHPLHV 269

Query: 269  KNMVRQVIEGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFA 90
            KN+VR V+E KFDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFA
Sbjct: 270  KNIVRNVLESKFDDACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 329

Query: 89   HMRICDGVGSYXXXXXXXXXXXLVRETAK 3
            HMRICDGVGSY           +VRETAK
Sbjct: 330  HMRICDGVGSYLQLCGLLAKLAIVRETAK 358


>gb|AFK40126.1| unknown [Medicago truncatula]
          Length = 333

 Score =  563 bits (1452), Expect = e-158
 Identities = 282/320 (88%), Positives = 297/320 (92%)
 Frame = -3

Query: 965 AGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 786
           A  ++PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAH
Sbjct: 11  ASYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 70

Query: 785 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQ 606
           ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQ
Sbjct: 71  ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQ 130

Query: 605 QALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQV 426
           QALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+V
Sbjct: 131 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKV 190

Query: 425 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVI 246
           PYVPEGLEAIIFTADGDMRQ LNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VI
Sbjct: 191 PYVPEGLEAIIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLHVKNMVRNVI 250

Query: 245 EGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGV 66
           EG FD+AC+GLK+LYDLGYSPTDIITTLFRIIK+YDM EYLKLEFMKETGFAHMRICDGV
Sbjct: 251 EGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGFAHMRICDGV 310

Query: 65  GSYXXXXXXXXXXXLVRETA 6
           GSY           LVR+TA
Sbjct: 311 GSYLQMCGLLAKFALVRDTA 330


>gb|EOY24643.1| Replication factor C / DNA polymerase III gamma-tau subunit isoform
           2 [Theobroma cacao]
          Length = 393

 Score =  562 bits (1448), Expect = e-158
 Identities = 279/302 (92%), Positives = 291/302 (96%)
 Frame = -3

Query: 962 GPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 783
           G ++PWVEKYRP KV+DIVGNEDAV+RLQVIA DGNMPNLIL+GPPGTGKTTSILALAHE
Sbjct: 11  GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHE 70

Query: 782 LLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 603
           LLG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQ
Sbjct: 71  LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 130

Query: 602 ALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVP 423
           ALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE+VP
Sbjct: 131 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVP 190

Query: 422 YVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIE 243
           YVPEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+E
Sbjct: 191 YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLE 250

Query: 242 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 63
           G+FDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 251 GRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310

Query: 62  SY 57
           SY
Sbjct: 311 SY 312


>ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arabidopsis lyrata subsp.
           lyrata] gi|297332271|gb|EFH62689.1| hypothetical protein
           ARALYDRAFT_475032 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  561 bits (1447), Expect = e-157
 Identities = 280/316 (88%), Positives = 294/316 (93%)
 Frame = -3

Query: 950 PWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGP 771
           PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLGP
Sbjct: 17  PWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 76

Query: 770 NYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRR 591
           NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRR
Sbjct: 77  NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRR 136

Query: 590 TMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPE 411
           T+EIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQ+ILGRL+VVV AE VPYVPE
Sbjct: 137 TIEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQQILGRLLVVVEAENVPYVPE 196

Query: 410 GLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFD 231
           GLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKN+VR V+E KFD
Sbjct: 197 GLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNIVRNVLESKFD 256

Query: 230 DACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXX 51
           DAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY  
Sbjct: 257 DACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ 316

Query: 50  XXXXXXXXXLVRETAK 3
                    + RETAK
Sbjct: 317 LCGLLAKLSIARETAK 332


>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
           gi|297742576|emb|CBI34725.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score =  561 bits (1446), Expect = e-157
 Identities = 281/318 (88%), Positives = 295/318 (92%)
 Frame = -3

Query: 956 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 777
           ++PWVEKYRPTKVADIVGNED V+RLQVIARDGNMPNLIL+GPPGTGKTTS+LALAHELL
Sbjct: 11  DMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSVLALAHELL 70

Query: 776 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 597
           G NYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLP G HKI+ILDEADSMT+GAQQAL
Sbjct: 71  GANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSMTTGAQQAL 130

Query: 596 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 417
           RRTMEIYSNSTRF LACN SSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+VP+V
Sbjct: 131 RRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVEAEKVPFV 190

Query: 416 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 237
           PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+EGK
Sbjct: 191 PEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLEGK 250

Query: 236 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 57
           FDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 251 FDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 310

Query: 56  XXXXXXXXXXXLVRETAK 3
                      +VRETAK
Sbjct: 311 LQLCGLLAKLAVVRETAK 328


>ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [Amborella trichopoda]
           gi|548861950|gb|ERN19315.1| hypothetical protein
           AMTR_s00069p00063160 [Amborella trichopoda]
          Length = 331

 Score =  559 bits (1441), Expect = e-157
 Identities = 279/329 (84%), Positives = 301/329 (91%)
 Frame = -3

Query: 989 MAXXXXXSAGPEIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT 810
           MA     S G E+PWVEKYRP KVA++VGN+DAV+RLQVIARDGNMPNLIL+GPPGTGKT
Sbjct: 1   MATNSSSSGGYELPWVEKYRPVKVAEVVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 809 TSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA 630
           +SILALAHELLG N++EAVLELNASDDRGIDVVRNKIKMFAQKKVTL PGRHKII+LDEA
Sbjct: 61  SSILALAHELLGTNFKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLSPGRHKIIVLDEA 120

Query: 629 DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM 450
           DSMT+GAQQALRRTMEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLM 180

Query: 449 VVVAAEQVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV 270
           +VV AE+VPYVPEGLEA+IFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHV
Sbjct: 181 IVVDAEKVPYVPEGLEAVIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHV 240

Query: 269 KNMVRQVIEGKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFA 90
           KNMVR VI+GKF++AC+GLK+LYDLGYSPTDIITTLFRIIKNYDMPEYLKLEF+KETGFA
Sbjct: 241 KNMVRNVIDGKFEEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFLKETGFA 300

Query: 89  HMRICDGVGSYXXXXXXXXXXXLVRETAK 3
           HMRICDGVGS             VRETAK
Sbjct: 301 HMRICDGVGSLLQLCGLLAKLSRVRETAK 329


>gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus vulgaris]
          Length = 330

 Score =  558 bits (1439), Expect = e-156
 Identities = 279/318 (87%), Positives = 294/318 (92%)
 Frame = -3

Query: 956 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 777
           ++PWVEKYRP KVADIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELL
Sbjct: 11  DVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELL 70

Query: 776 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 597
           GPN +E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMT+GAQQAL
Sbjct: 71  GPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTTGAQQAL 130

Query: 596 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 417
           RRTMEIYSNSTRF LACNTS+KIIEPIQSRCA+VRF+RL DQEILGRLM+VV AE+VPYV
Sbjct: 131 RRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLLDQEILGRLMIVVQAEKVPYV 190

Query: 416 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 237
           PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VIEG 
Sbjct: 191 PEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGN 250

Query: 236 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 57
           FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 251 FDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 310

Query: 56  XXXXXXXXXXXLVRETAK 3
                      LVRE AK
Sbjct: 311 LQLCGLLAKLSLVRENAK 328


>ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana]
           gi|75169912|sp|Q9CAM7.1|RFC2_ARATH RecName:
           Full=Replication factor C subunit 2; Short=AtRFC2;
           AltName: Full=Activator 1 subunit 2; AltName:
           Full=Protein EMBRYO DEFECTIVE 2811
           gi|12323266|gb|AAG51618.1|AC010795_22 replication
           factor, putative; 74998-73295 [Arabidopsis thaliana]
           gi|182623790|gb|ACB88833.1| At1g63160 [Arabidopsis
           thaliana] gi|332195942|gb|AEE34063.1| replication factor
           C 2 [Arabidopsis thaliana]
          Length = 333

 Score =  558 bits (1439), Expect = e-156
 Identities = 279/316 (88%), Positives = 295/316 (93%)
 Frame = -3

Query: 950 PWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGP 771
           PWVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLG 
Sbjct: 16  PWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGT 75

Query: 770 NYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRR 591
           NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRR
Sbjct: 76  NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRR 135

Query: 590 TMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPE 411
           T+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSDQ+ILGRL+VVVAAE+VPYVPE
Sbjct: 136 TIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVPYVPE 195

Query: 410 GLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFD 231
           GLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKN+VR V+E KFD
Sbjct: 196 GLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRNVLESKFD 255

Query: 230 DACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXX 51
            AC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY  
Sbjct: 256 IACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQ 315

Query: 50  XXXXXXXXXLVRETAK 3
                    +VRETAK
Sbjct: 316 LCGLLAKLSIVRETAK 331


>dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa Japonica Group]
           gi|116310007|emb|CAH67033.1| OSIGBa0139P06.6 [Oryza
           sativa Indica Group] gi|218195393|gb|EEC77820.1|
           hypothetical protein OsI_17026 [Oryza sativa Indica
           Group]
          Length = 335

 Score =  558 bits (1438), Expect = e-156
 Identities = 276/318 (86%), Positives = 298/318 (93%)
 Frame = -3

Query: 956 EIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELL 777
           +IPWVEKYRPT+VAD+VGN DAVARLQVIARDGNMPNLIL+GPPGTGKTTSIL+LAHELL
Sbjct: 16  DIPWVEKYRPTRVADVVGNSDAVARLQVIARDGNMPNLILSGPPGTGKTTSILSLAHELL 75

Query: 776 GPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQAL 597
           GP+YREAVLELNASDDRG+DVVRNKIKMFAQKKVTL PGRHKI+ILDEADSMTSGAQQAL
Sbjct: 76  GPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEADSMTSGAQQAL 135

Query: 596 RRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYV 417
           RRTMEIYSN+TRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLM+VVAAE+VPYV
Sbjct: 136 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVAAEKVPYV 195

Query: 416 PEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGK 237
           PEGLEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMV+ V++GK
Sbjct: 196 PEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGK 255

Query: 236 FDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 57
           FD+AC+ LK+LYDLGYSPTDIITTLFR+IKNYDM EYLKLE +KETGFAHMRICDGVGS+
Sbjct: 256 FDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFAHMRICDGVGSF 315

Query: 56  XXXXXXXXXXXLVRETAK 3
                      LVRETAK
Sbjct: 316 LQLSGLLAKFALVRETAK 333