BLASTX nr result
ID: Rehmannia24_contig00018922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00018922
(755 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354580.1| PREDICTED: DNA-directed RNA polymerases II, ... 157 3e-36
ref|XP_004229520.1| PREDICTED: probable DNA-directed RNA polymer... 155 1e-35
gb|EMJ09140.1| hypothetical protein PRUPE_ppa017455mg, partial [... 150 4e-34
gb|EXB80870.1| DNA-directed RNA polymerases I, II, and III subun... 148 2e-33
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 144 3e-32
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 142 2e-31
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 142 2e-31
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g... 141 3e-31
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi... 141 3e-31
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 141 3e-31
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 139 8e-31
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I... 136 7e-30
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 135 1e-29
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 135 2e-29
ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer... 134 3e-29
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 133 6e-29
ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr... 133 7e-29
ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps... 133 7e-29
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I... 133 7e-29
gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subun... 132 1e-28
>ref|XP_006354580.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Solanum tuberosum]
gi|565376162|ref|XP_006354581.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Solanum tuberosum]
Length = 144
Score = 157 bits (398), Expect = 3e-36
Identities = 89/150 (59%), Positives = 110/150 (73%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M FHFDEIIKV+K D + YDKVSR+ A+ D ++LD+++ELYPM E +RM+I
Sbjct: 1 MDAFHFDEIIKVVKVDADGKKYDKVSRIEAESSDGASSIQLDINSELYPMKRKELYRMVI 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
STTL M+GSAV Y PEGK SL DKFEY++HGL+YK++ D KVVVY+SF
Sbjct: 61 STTL-MEGSAVTSYPPEGK--SLLDKFEYIVHGLVYKVS-----MEGSGADKKVVVYVSF 112
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGLQLMLK D LK+ KFK+DQKLFLLLRK+
Sbjct: 113 GGLQLMLKSDALKVQKFKLDQKLFLLLRKM 142
>ref|XP_004229520.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
subunit RPABC3-like [Solanum lycopersicum]
Length = 144
Score = 155 bits (392), Expect = 1e-35
Identities = 88/150 (58%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M FHFDEIIKV+K D + Y+KVSR+ A+ D ++LD+++ELYPM E +RM+I
Sbjct: 1 MDAFHFDEIIKVVKVDADGKKYEKVSRIEAESSDGATSIQLDINSELYPMKRKELYRMVI 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
STTL M+GSAV Y PEGK SL DKFEY++HGL+YK++ D KVVVY+SF
Sbjct: 61 STTL-MEGSAVTSYPPEGK--SLLDKFEYIVHGLVYKVS-----MEGSGADKKVVVYVSF 112
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGLQLMLK D LK KFK+DQKLFLLLRK+
Sbjct: 113 GGLQLMLKSDALKTQKFKLDQKLFLLLRKM 142
>gb|EMJ09140.1| hypothetical protein PRUPE_ppa017455mg, partial [Prunus persica]
Length = 170
Score = 150 bits (379), Expect = 4e-34
Identities = 82/158 (51%), Positives = 107/158 (67%), Gaps = 8/158 (5%)
Frame = +2
Query: 50 RMGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRML 226
RM +F FD+I + K D + +DKVSR++A+ E L LDV+TE+YPM + F M+
Sbjct: 12 RMVDFLFDDIFTLEKVDPDGKKFDKVSRIVAQSEKRGVSLTLDVNTEIYPMHEKDKFLMV 71
Query: 227 ISTTLNMDGSAVAG-------YFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDV 385
+S TLN G+ VAG Y E +QKSLADKF+Y+MHGLLYKM+ K K+ + V
Sbjct: 72 LSPTLNWSGAPVAGKQGQVLYYTFEVEQKSLADKFDYIMHGLLYKMSTEKGKSEYSKEGV 131
Query: 386 KVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
KV VY SFGGLQ+MLKGDP KFK+DQ +FLL+RK+
Sbjct: 132 KVEVYASFGGLQMMLKGDPTNCTKFKIDQNMFLLIRKL 169
>gb|EXB80870.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3 [Morus
notabilis]
Length = 152
Score = 148 bits (373), Expect = 2e-33
Identities = 76/156 (48%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M +F FD+I V + + N+ +DKV+R+ A E + LDV+TE+YPM G+ F M++
Sbjct: 1 MVDFLFDDIFSVEELNPNKEKFDKVTRIKAHSEKHGMLMHLDVNTEIYPMKEGDRFVMVL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
S TLN +G VA Y + +QKSLADKFEY+MHGLLYK+ E D KV +Y+SF
Sbjct: 61 SPTLNWNGVPVADYHKQAEQKSLADKFEYIMHGLLYKLTE-----EGSGSDFKVGIYVSF 115
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI*HEYLS 517
GGLQ+ML GDP + KFK DQK+FLL+RK+ +++++
Sbjct: 116 GGLQMMLNGDPAQCTKFKHDQKMFLLIRKVSNDFVT 151
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 144 bits (363), Expect = 3e-32
Identities = 72/150 (48%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M EF F++I V + D + +D+VSR+ A+ E + Y++LDV T++YPM PG+ F M++
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
TLN+DG+ G+F + +K+LADK+EYVMHG LYK++E KE + + KV +Y SF
Sbjct: 61 VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETS---GQNAKVEMYASF 117
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 118 GGLLMMLKGDPSSAANFELDQRLFLLMRKV 147
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 142 bits (357), Expect = 2e-31
Identities = 73/166 (43%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Frame = +2
Query: 5 PVSGKAPATSNPSLTRMGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVH 181
P P T P +M E F++I V + D + +D+VSR+ A+ E D Y++LDV
Sbjct: 235 PAFPSRPLTPPPPPRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVA 294
Query: 182 TELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEK 361
TE+YPM G+ F M+++ TLN+DG+ G++ + +K+LADKF+YVMHG LYK++E
Sbjct: 295 TEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISE---- 350
Query: 362 THDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
KV +Y SFGGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 351 DSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 142 bits (357), Expect = 2e-31
Identities = 73/166 (43%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Frame = +2
Query: 5 PVSGKAPATSNPSLTRMGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVH 181
P P T P +M E F++I V + D + +D+VSR+ A+ E D Y++LDV
Sbjct: 30 PAFPSRPLTPPPPPRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVA 89
Query: 182 TELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEK 361
TE+YPM G+ F M+++ TLN+DG+ G++ + +K+LADKF+YVMHG LYK++E
Sbjct: 90 TEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISE---- 145
Query: 362 THDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
KV +Y SFGGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 146 DSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 191
>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
gi|29244685|gb|AAO73277.1| putative RNA polymerase
[Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
putative RNA polymerase [Oryza sativa Japonica Group]
gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
protein, expressed [Oryza sativa Japonica Group]
gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
protein, expressed [Oryza sativa Japonica Group]
gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
protein OsJ_13351 [Oryza sativa Japonica Group]
gi|215692970|dbj|BAG88390.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 148
Score = 141 bits (355), Expect = 3e-31
Identities = 70/150 (46%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M EF F++I V + D + +D+VSR+ A+ + D Y++LDV T++YPM PG+ F M++
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
TLN+DG+ + +F + +K+LADK+EYVMHG LYK++E K+ + + KV +Y SF
Sbjct: 61 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTS--DQNAKKVEMYASF 118
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 119 GGLLVMLKGDPSSAANFELDQRLFLLMRKV 148
>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
Length = 215
Score = 141 bits (355), Expect = 3e-31
Identities = 70/150 (46%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M EF F++I V + D + +D+VSR+ A+ + D Y++LDV T++YPM PG+ F M++
Sbjct: 68 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
TLN+DG+ + +F + +K+LADK+EYVMHG LYK++E K+ + + KV +Y SF
Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTS--DQNAKKVEMYASF 185
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 186 GGLLVMLKGDPSSAANFELDQRLFLLMRKV 215
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3 isoform 1 [Vitis vinifera]
gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3 isoform 2
[Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
protein product [Vitis vinifera]
Length = 145
Score = 141 bits (355), Expect = 3e-31
Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
Frame = +2
Query: 68 FDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLISTTLN 244
F +I KV++ D + +DKVSR+ A+ E D Y++LDV+TE+YPM GE F M +++TL+
Sbjct: 6 FGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLD 65
Query: 245 MDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQL 424
+DG+ GY+ + +KSLADKFEYVMHG LYK++E +VK V+Y+SFGGL +
Sbjct: 66 LDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISE-----EGSGPNVKGVIYVSFGGLLM 120
Query: 425 MLKGDPLKMHKFKVDQKLFLLLRKI 499
ML GDP K +DQ++FLL+RK+
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 139 bits (351), Expect = 8e-31
Identities = 70/150 (46%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M E F++I V + D + +D+VSR+ A+ E D Y++LDV TE+YPM PG+ F M++
Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
+ TLN+DG+ G++ + +K+LADK++YVMHG LYK++E G KV +Y SF
Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISE----DGSGGQATKVEIYASF 116
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL +MLKGDP F++DQ+LFLL+RK+
Sbjct: 117 GGLLMMLKGDPSTAANFELDQRLFLLIRKV 146
>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
unnamed protein product [Vitis vinifera]
Length = 145
Score = 136 bits (343), Expect = 7e-30
Identities = 70/150 (46%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M E FD+I V D +DKVSR+ A E D +++LDV+ E YP+ GE FRM++
Sbjct: 1 MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
+ TL++DG+ V YF +G+QKSLADKF+YVM+G++YK++ DVK V+Y SF
Sbjct: 61 APTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVS-----NEGSGPDVKGVIYASF 115
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL ++LKGDP ++K +V+++LFLL++K+
Sbjct: 116 GGLLMILKGDPSNLNKLEVNKRLFLLMKKV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 135 bits (340), Expect = 1e-29
Identities = 69/150 (46%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M E F++I V + D + +D+V+R+ A+ E D ++ LDV+TE+YPM + F M++
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
++TLN+DG+ GYF +G +KSLADKFEYVMHG LY+++E H VK +++SF
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKH-----VKADIFVSF 115
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL + L+GDP KF++DQK+FLL+RK+
Sbjct: 116 GGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 135 bits (339), Expect = 2e-29
Identities = 68/150 (45%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M E F++I V + D + +D+V+R+ A+ E D ++ LD++TE+YPM + F M++
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
++TLN+DG+ GYF +G +KSLADKFEYVMHG LY+++E H VK +++SF
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKH-----VKADIFVSF 115
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL + L+GDP KF++DQK+FLL+RK+
Sbjct: 116 GGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
subunit RPABC3-like [Cucumis sativus]
gi|449509097|ref|XP_004163492.1| PREDICTED: probable
DNA-directed RNA polymerases I, II, and III subunit
RPABC3-like [Cucumis sativus]
Length = 146
Score = 134 bits (337), Expect = 3e-29
Identities = 68/129 (52%), Positives = 90/129 (69%)
Frame = +2
Query: 113 YDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLISTTLNMDGSAVAGYFPEGKQK 292
YDKVSR+ A+ E ++ LDV+TE+YP+ GE M++S TLN DGS V Y + +K
Sbjct: 22 YDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKK 81
Query: 293 SLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQ 472
SLADKFEY+MHG YK+++ D+KV VY SFGGLQ++LKGDP+ KF+VDQ
Sbjct: 82 SLADKFEYIMHGKTYKLSD-----EGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQ 136
Query: 473 KLFLLLRKI 499
+FLLLRK+
Sbjct: 137 NMFLLLRKL 145
>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
[Aegilops tauschii]
Length = 220
Score = 133 bits (335), Expect = 6e-29
Identities = 65/150 (43%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M E F++I V + D + +D+V+R+ A+ E + Y++LD+ T++YPM G+ F M++
Sbjct: 1 MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
+ TLN+DG+ GY+ + +K+LADK++YVMHG LYK++E G KV +Y SF
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKG--PTKVEIYASF 118
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL ++LKGDP ++DQKLFLL+RK+
Sbjct: 119 GGLLMLLKGDPSSAANLELDQKLFLLIRKV 148
>ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum]
gi|557098120|gb|ESQ38556.1| hypothetical protein
EUTSA_v10029046mg [Eutrema salsugineum]
Length = 146
Score = 133 bits (334), Expect = 7e-29
Identities = 67/145 (46%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
Frame = +2
Query: 68 FDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLISTTLN 244
F++I V K D + +DKV+RV A+ + + ++ LDV+TE+YPM G+ F M ++ TLN
Sbjct: 8 FEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTMAMAPTLN 67
Query: 245 MDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQL 424
+DG+ GYF G +K+LADK+EY+MHG LYK+ E KT K +Y+SFGGL +
Sbjct: 68 LDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKITERDGKT------PKAELYVSFGGLLM 121
Query: 425 MLKGDPLKMHKFKVDQKLFLLLRKI 499
+L+GDP + F++DQ+LFLL+RK+
Sbjct: 122 LLQGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella]
gi|482574468|gb|EOA38655.1| hypothetical protein
CARUB_v10010575mg [Capsella rubella]
Length = 146
Score = 133 bits (334), Expect = 7e-29
Identities = 67/145 (46%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
Frame = +2
Query: 68 FDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLISTTLN 244
F++I V K D + +DKV+RV A + + ++ LDV+TE+YPM G+ F + ++ TLN
Sbjct: 8 FEDIFVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPTLN 67
Query: 245 MDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQL 424
+DG+ GYF G +K+LADK+EY+MHG LYK++E KT K +Y+SFGGL +
Sbjct: 68 LDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISERDGKT------PKAELYVSFGGLLM 121
Query: 425 MLKGDPLKMHKFKVDQKLFLLLRKI 499
+LKGDP + F++DQ+LFLL+RK+
Sbjct: 122 LLKGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Cucumis sativus]
gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
[Cucumis sativus]
Length = 144
Score = 133 bits (334), Expect = 7e-29
Identities = 68/150 (45%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M E FD+I K+ + + + +DKV+R+ AK E D ++ LD+++E+YP+ GE F M +
Sbjct: 1 MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
+ TLN+DG+ GYF +G +KSLAD++EYVM G L++++E+ GH K + SF
Sbjct: 61 APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISES-----SGHGG-KAEIDASF 114
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL +MLKGDP KF++DQ+LFLL+RK+
Sbjct: 115 GGLLMMLKGDPSHCSKFELDQRLFLLIRKV 144
>gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Morus
notabilis]
Length = 187
Score = 132 bits (333), Expect = 1e-28
Identities = 70/150 (46%), Positives = 100/150 (66%), Gaps = 1/150 (0%)
Frame = +2
Query: 53 MGEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 229
M EF F++I K+ + + + +DKV+R+ AK E D ++ LDV T++YPM GE F M +
Sbjct: 1 MAEFLFEDIFKIDRLNPDGKKFDKVTRIEAKSEKFDMFMHLDVGTDVYPMNEGEKFSMAL 60
Query: 230 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 409
S+TLN DG+ GY+ G +K+LAD +EYVM G LY++AE GH K + SF
Sbjct: 61 SSTLNEDGTPDTGYYTPGNRKTLADNYEYVMQGKLYRIAEG-----SGHHG-KAEIDASF 114
Query: 410 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 499
GGL +MLKGDP K+++DQ+LFLL+RK+
Sbjct: 115 GGLLMMLKGDPSYFKKYELDQRLFLLIRKV 144