BLASTX nr result

ID: Rehmannia24_contig00018876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018876
         (633 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365631.1| PREDICTED: DNA repair protein XRCC2 homolog ...    74   3e-11
ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog ...    74   3e-11
ref|XP_004228889.1| PREDICTED: DNA repair protein XRCC2 homolog ...    74   3e-11
gb|EOY01429.1| X-ray repair cross complementing 2 (XRCC2), putat...    59   9e-07
emb|CBI21655.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog ...    57   3e-06

>ref|XP_006365631.1| PREDICTED: DNA repair protein XRCC2 homolog [Solanum tuberosum]
          Length = 174

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = +3

Query: 363 FLLCILSVSIHPLLQTLHYQLQKDKKNQGTAAYMLIIDSIGAFYWMDRALPSSSTGSNNR 542
           ++ C  S      L+TLH+QLQK+K+  G+  Y+L+IDSIGAFYWMDRA PS   GSNNR
Sbjct: 65  YIRCYDSFEFLATLKTLHFQLQKEKEAHGSGVYLLMIDSIGAFYWMDRASPSIPPGSNNR 124

Query: 543 *WLTKQ 560
             L+ Q
Sbjct: 125 RSLSLQ 130


>ref|XP_006365613.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Solanum
           tuberosum] gi|565400189|ref|XP_006365614.1| PREDICTED:
           DNA repair protein XRCC2 homolog isoform X2 [Solanum
           tuberosum]
          Length = 338

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = +3

Query: 363 FLLCILSVSIHPLLQTLHYQLQKDKKNQGTAAYMLIIDSIGAFYWMDRALPSSSTGSNNR 542
           ++ C  S      L+TLH+QLQK+K+  G+  Y+L+IDSIGAFYWMDRA PS   GSNNR
Sbjct: 150 YIRCYDSFEFLATLKTLHFQLQKEKEAHGSGVYLLMIDSIGAFYWMDRASPSIPPGSNNR 209

Query: 543 *WLTKQ 560
             L+ Q
Sbjct: 210 RSLSLQ 215


>ref|XP_004228889.1| PREDICTED: DNA repair protein XRCC2 homolog [Solanum lycopersicum]
          Length = 292

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = +3

Query: 363 FLLCILSVSIHPLLQTLHYQLQKDKKNQGTAAYMLIIDSIGAFYWMDRALPSSSTGSNNR 542
           ++ C  S      L+TLH+QLQK+K+  G+  Y+L+IDSIGAFYWMDRA PS   GSNNR
Sbjct: 150 YIRCYDSSEFLATLKTLHFQLQKEKEAHGSGVYLLMIDSIGAFYWMDRASPSIPPGSNNR 209

Query: 543 *WLTKQ 560
             L+ Q
Sbjct: 210 RSLSLQ 215


>gb|EOY01429.1| X-ray repair cross complementing 2 (XRCC2), putative [Theobroma
           cacao]
          Length = 340

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = +3

Query: 363 FLLCILSVSIHPLLQTLHYQLQKDKKNQGTAAYMLIIDSIGAFYWMDRALPSSSTGSNNR 542
           ++ C  S      L+TLHY+LQK+K+  G   + L+IDSIGAF+W+DR   S S   NNR
Sbjct: 148 YIRCYDSSEFLATLKTLHYRLQKEKEAHGINVHFLLIDSIGAFHWVDRGSSSFSLDGNNR 207


>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +3

Query: 363 FLLCILSVSIHPLLQTLHYQLQKDKKNQGTAAYMLIIDSIGAFYWMDRALPSSSTGSNNR 542
           ++ C  S      L+TL Y+LQ+ ++  G  A+ L+IDSIGAFYW+DRA  S    SN+R
Sbjct: 133 YIRCYDSFEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRASTSLHLESNSR 192

Query: 543 *WLTKQILA 569
             L+ Q ++
Sbjct: 193 KRLSLQSIS 201


>ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog [Vitis vinifera]
          Length = 315

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +3

Query: 363 FLLCILSVSIHPLLQTLHYQLQKDKKNQGTAAYMLIIDSIGAFYWMDRALPSSSTGSNNR 542
           ++ C  S      L+TL Y+LQ+ ++  G  A+ L+IDSIGAFYW+DRA  S    SN+R
Sbjct: 148 YIRCYDSFEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRASTSLHLESNSR 207

Query: 543 *WLTKQILA 569
             L+ Q ++
Sbjct: 208 KRLSLQSIS 216


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