BLASTX nr result
ID: Rehmannia24_contig00018849
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00018849
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359915.1| PREDICTED: protein TIME FOR COFFEE-like isof... 60 3e-07
ref|XP_006359914.1| PREDICTED: protein TIME FOR COFFEE-like isof... 60 3e-07
ref|XP_006359913.1| PREDICTED: protein TIME FOR COFFEE-like isof... 60 3e-07
ref|XP_006359912.1| PREDICTED: protein TIME FOR COFFEE-like isof... 60 3e-07
ref|XP_006359911.1| PREDICTED: protein TIME FOR COFFEE-like isof... 60 3e-07
ref|XP_004247369.1| PREDICTED: protein TIME FOR COFFEE-like [Sol... 59 9e-07
ref|XP_002311616.2| hypothetical protein POPTR_0008s15060g [Popu... 57 3e-06
ref|XP_004296899.1| PREDICTED: protein TIME FOR COFFEE-like [Fra... 57 3e-06
ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit... 57 3e-06
>ref|XP_006359915.1| PREDICTED: protein TIME FOR COFFEE-like isoform X5 [Solanum
tuberosum]
Length = 1684
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Frame = +1
Query: 58 LFFSNPYXXXXXXXXXXXXXXXXA--GYYMTQRR-PDQH-QRAPGAPV-TSSSGVLSL-- 216
LFFS+PY A GYY+ QRR PDQ Q+ PG+ +SSSG+L+L
Sbjct: 1534 LFFSSPYVQAQPPHSTGTSSTGQATGGYYLQQRRRPDQPGQQLPGSSAASSSSGMLTLCP 1593
Query: 217 ----GTHTNDPATAIAAATC--NVKGGILSSQGMLQGSPF 318
G T+DPA AIAAA N+KGG+L SQGML + +
Sbjct: 1594 VTLGGGTTSDPAKAIAAAAAANNMKGGVLPSQGMLHAAQY 1633
>ref|XP_006359914.1| PREDICTED: protein TIME FOR COFFEE-like isoform X4 [Solanum
tuberosum]
Length = 1690
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Frame = +1
Query: 58 LFFSNPYXXXXXXXXXXXXXXXXA--GYYMTQRR-PDQH-QRAPGAPV-TSSSGVLSL-- 216
LFFS+PY A GYY+ QRR PDQ Q+ PG+ +SSSG+L+L
Sbjct: 1553 LFFSSPYVQAQPPHSTGTSSTGQATGGYYLQQRRRPDQPGQQLPGSSAASSSSGMLTLCP 1612
Query: 217 ----GTHTNDPATAIAAATC--NVKGGILSSQGMLQGSPF 318
G T+DPA AIAAA N+KGG+L SQGML + +
Sbjct: 1613 VTLGGGTTSDPAKAIAAAAAANNMKGGVLPSQGMLHAAQY 1652
>ref|XP_006359913.1| PREDICTED: protein TIME FOR COFFEE-like isoform X3 [Solanum
tuberosum]
Length = 1691
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Frame = +1
Query: 58 LFFSNPYXXXXXXXXXXXXXXXXA--GYYMTQRR-PDQH-QRAPGAPV-TSSSGVLSL-- 216
LFFS+PY A GYY+ QRR PDQ Q+ PG+ +SSSG+L+L
Sbjct: 1553 LFFSSPYVQAQPPHSTGTSSTGQATGGYYLQQRRRPDQPGQQLPGSSAASSSSGMLTLCP 1612
Query: 217 ----GTHTNDPATAIAAATC--NVKGGILSSQGMLQGSPF 318
G T+DPA AIAAA N+KGG+L SQGML + +
Sbjct: 1613 VTLGGGTTSDPAKAIAAAAAANNMKGGVLPSQGMLHAAQY 1652
>ref|XP_006359912.1| PREDICTED: protein TIME FOR COFFEE-like isoform X2 [Solanum
tuberosum]
Length = 1702
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Frame = +1
Query: 58 LFFSNPYXXXXXXXXXXXXXXXXA--GYYMTQRR-PDQH-QRAPGAPV-TSSSGVLSL-- 216
LFFS+PY A GYY+ QRR PDQ Q+ PG+ +SSSG+L+L
Sbjct: 1552 LFFSSPYVQAQPPHSTGTSSTGQATGGYYLQQRRRPDQPGQQLPGSSAASSSSGMLTLCP 1611
Query: 217 ----GTHTNDPATAIAAATC--NVKGGILSSQGMLQGSPF 318
G T+DPA AIAAA N+KGG+L SQGML + +
Sbjct: 1612 VTLGGGTTSDPAKAIAAAAAANNMKGGVLPSQGMLHAAQY 1651
>ref|XP_006359911.1| PREDICTED: protein TIME FOR COFFEE-like isoform X1 [Solanum
tuberosum]
Length = 1703
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Frame = +1
Query: 58 LFFSNPYXXXXXXXXXXXXXXXXA--GYYMTQRR-PDQH-QRAPGAPV-TSSSGVLSL-- 216
LFFS+PY A GYY+ QRR PDQ Q+ PG+ +SSSG+L+L
Sbjct: 1553 LFFSSPYVQAQPPHSTGTSSTGQATGGYYLQQRRRPDQPGQQLPGSSAASSSSGMLTLCP 1612
Query: 217 ----GTHTNDPATAIAAATC--NVKGGILSSQGMLQGSPF 318
G T+DPA AIAAA N+KGG+L SQGML + +
Sbjct: 1613 VTLGGGTTSDPAKAIAAAAAANNMKGGVLPSQGMLHAAQY 1652
>ref|XP_004247369.1| PREDICTED: protein TIME FOR COFFEE-like [Solanum lycopersicum]
Length = 1645
Score = 58.5 bits (140), Expect = 9e-07
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Frame = +1
Query: 58 LFFSNPYXXXXXXXXXXXXXXXXA--GYYMTQRR-PDQH-QRAPGAPV-TSSSGVLSL-- 216
LFFS+PY A GYY+ QRR PDQ Q+ PG+ +SSSG+L+L
Sbjct: 1507 LFFSSPYVQAQPPHSSGTSSAGQATGGYYLQQRRRPDQPGQQLPGSSAASSSSGMLTLCP 1566
Query: 217 ----GTHTNDPATAIAAATC--NVKGGILSSQGMLQGSPF 318
G T+DPA AIAAA N+KGG+L SQG+L + +
Sbjct: 1567 VTLGGGTTSDPAKAIAAAAAANNMKGGVLPSQGILHAAQY 1606
>ref|XP_002311616.2| hypothetical protein POPTR_0008s15060g [Populus trichocarpa]
gi|550333109|gb|EEE88983.2| hypothetical protein
POPTR_0008s15060g [Populus trichocarpa]
Length = 1600
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
Frame = +1
Query: 127 AGYYMTQRRPDQHQRAPGAPVTSSSGVLSL-------GTHTNDPATAIAAATCNVKGGIL 285
+G+Y+ + R +Q + GAP TSS+G+L+L T T DPA A+AAA+ N+KGG L
Sbjct: 1491 SGFYLQRHRSEQQPQPHGAPATSSTGMLNLCHPVTLANTSTTDPAKAVAAASNNMKGGGL 1550
Query: 286 SSQGML 303
QG++
Sbjct: 1551 PPQGLI 1556
>ref|XP_004296899.1| PREDICTED: protein TIME FOR COFFEE-like [Fragaria vesca subsp. vesca]
Length = 1625
Score = 56.6 bits (135), Expect = 3e-06
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Frame = +1
Query: 58 LFFSNPYXXXXXXXXXXXXXXXXA---GYYM-TQRRPD---QHQRAPGAPVTSSSGVLSL 216
L+FSNPY + GYY+ T+RR D Q Q + G+ TSSSG+LSL
Sbjct: 1484 LYFSNPYMQNQQASHSNSSGGTASPSSGYYVPTRRRGDVQQQSQHSQGSSGTSSSGMLSL 1543
Query: 217 --------GTHTNDPATAIAAATCNVKGGILSSQGMLQGSPF 318
T T DPA A+AAA N+KGG LSSQ ++ + F
Sbjct: 1544 CPPVTLANNTGTTDPAKAVAAAANNMKGGGLSSQTLIHHAQF 1585
>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
Length = 1587
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = +1
Query: 58 LFFSNPYXXXXXXXXXXXXXXXXAGYYMTQRRPDQH---QRAPGAPVTSSSGVLSL---- 216
LFFS+PY +GYY+ +RR +QH Q+ G+ TSS+G+L+L
Sbjct: 1442 LFFSSPYLQTQGPHSTTSTSSASSGYYLQRRRSEQHPLQQQPQGSSGTSSTGMLTLCPPV 1501
Query: 217 ---GTHTNDPATAIAAATCNVKGGILSSQGM 300
T+DPA AIAA+ N+KGG L SQG+
Sbjct: 1502 TLASASTSDPARAIAAS--NMKGGGLPSQGI 1530