BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018764
         (1151 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   319   e-103
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   310   e-101
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   290   5e-91
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  287   1e-90
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   288   2e-90
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   290   3e-90
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   287   3e-90
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   286   3e-90
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   286   2e-89
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   283   2e-89
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   288   2e-89
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   285   2e-89
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   279   3e-89
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   285   4e-89
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]   280   5e-89
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   286   5e-89
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   283   8e-89
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   278   1e-88
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   281   1e-88
emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera]   284   1e-88

>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  319 bits (818), Expect(2) = e-103
 Identities = 164/310 (52%), Positives = 210/310 (67%), Gaps = 1/310 (0%)
 Frame = +3

Query: 225  VCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXXXXXXXXXXXX 404
            VCKL+KALYG K A + WFDKL+  LQ  GF S+K+D SLF R ++ S            
Sbjct: 888  VCKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIV 947

Query: 405  XTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDG-IILTQKKYIQDLLAKVH 581
             TGSS+++I  +I+ L   FSLKDLG L +FLGIEV    DG + L+QKKYIQDLL K  
Sbjct: 948  VTGSSSQEIHELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTK 1007

Query: 582  MTDAKGXXXXXXXXXXXXRFEGNCFPDGLLYRQVIGGLQYLTITRPEITYEVNKLSQYMQ 761
            M  AK                G+   +   YR V+G LQY+TITRPEI + VNK+ Q+MQ
Sbjct: 1008 MDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQ 1067

Query: 762  NPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDDRKSTSGHCIFV 941
             PLD+HWKAVKR+LRY+ GTTD G+ L  +  + + GF D+DW SD DDR+STSGHC+F+
Sbjct: 1068 KPLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFL 1127

Query: 942  GKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLSYPPVIWVDNLS 1121
            GK+L+ WSS+KQ T SRSS EAEYRSLA+  +E+LWL+SL  ELQ  ++  PVIW DN+S
Sbjct: 1128 GKSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNIS 1187

Query: 1122 AVFMSSNPVV 1151
             V +S+NPV+
Sbjct: 1188 TVSLSANPVL 1197



 Score = 83.2 bits (204), Expect(2) = e-103
 Identities = 36/64 (56%), Positives = 53/64 (82%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           AKGY+Q+ G DF + FSPVVKP T+R++L IA++++W IRQ+D++NAFLNGEL +  E++
Sbjct: 813 AKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQSWCIRQLDVNNAFLNGELQE--EVY 870

Query: 181 IHQP 192
           + QP
Sbjct: 871 MDQP 874


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  310 bits (795), Expect(2) = e-101
 Identities = 156/319 (48%), Positives = 207/319 (64%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            GF      + VC+L+KALYG K A + WF+KL   L S GF S+K+D SLF R +     
Sbjct: 1066 GFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHIT 1125

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                        GS    I  +I  L+S FSLKDLG +H+FLGI+V++  +G+ L+Q KY
Sbjct: 1126 YVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKY 1185

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFPDGLLYRQVIGGLQYLTITRPEITYE 734
            I+DLL K  M   K               +G+   D   YR  +G LQY+TITRPE+++ 
Sbjct: 1186 IRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELSFS 1245

Query: 735  VNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDDRK 914
            VNK+ Q+MQNP + HWK VKR+LRY+ GT  +GL L K+++L + GF D+DWASD DDR+
Sbjct: 1246 VNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRR 1305

Query: 915  STSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLSYP 1094
            STSGHC+F+G NLI W S+KQ  VSRSS E EYRSLA  + E+ WL+SL  ELQ+PL+ P
Sbjct: 1306 STSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLLSELQLPLAKP 1365

Query: 1095 PVIWVDNLSAVFMSSNPVV 1151
            P++W DNLS V +S+NPV+
Sbjct: 1366 PLVWCDNLSTVLLSANPVL 1384



 Score = 85.1 bits (209), Expect(2) = e-101
 Identities = 39/64 (60%), Positives = 52/64 (81%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKG+ Q AG DFT+ FSPVVKP TVR++ TIAL+RNW I+Q+D++NAFLNG+L +  E+ 
Sbjct: 1003 AKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQE--EVF 1060

Query: 181  IHQP 192
            + QP
Sbjct: 1061 MQQP 1064


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  290 bits (741), Expect(2) = 5e-91
 Identities = 146/320 (45%), Positives = 205/320 (64%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+E   K +YVCKL+KALYG K A + W+ +L + L SLGF +SKADTSLFF N  +   
Sbjct: 934  GYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTI 993

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         S+++  + +++ L+  F+LKDLG L++FLGIEVN ++DGIILTQ KY
Sbjct: 994  FVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKY 1053

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCF--PDGLLYRQVIGGLQYLTITRPEIT 728
              DLL KV M+D K               EG+     D   YR ++G LQYLT+TRP+I 
Sbjct: 1054 ASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIA 1113

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ Q++  P   HW AVKR+LRYI   T+ GL + +++  +++ FSD+DWA   DD
Sbjct: 1114 FSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDD 1173

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            RKST G  +F+G NL+ WS+RKQPTVSRSS E+EY++LA A  E++W++ L  E+ I   
Sbjct: 1174 RKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSP 1233

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                +W DNL A ++S+NP+
Sbjct: 1234 RAAKLWCDNLGAKYLSANPI 1253



 Score = 73.2 bits (178), Expect(2) = 5e-91
 Identities = 34/64 (53%), Positives = 49/64 (76%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKGY Q  GID+ D FSPVVK  T+R+IL+IA++R W + Q+D+ NAFL+G L++  E++
Sbjct: 871  AKGYKQQYGIDYDDTFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEE--EVY 928

Query: 181  IHQP 192
            + QP
Sbjct: 929  MQQP 932


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  287 bits (734), Expect(2) = 1e-90
 Identities = 145/320 (45%), Positives = 198/320 (61%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            GFE   K +YVCKL+KALYG K A + W+ +L   L  LGF +SKADTSLFF N      
Sbjct: 1057 GFESFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIM 1116

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         S+ +    ++  L+  F+LKDLG LH+FLGIEV  + +GI+LTQ+KY
Sbjct: 1117 FVLVYVDDIIIASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKY 1176

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFP--DGLLYRQVIGGLQYLTITRPEIT 728
              DLL +V+M++ K              +EG+     D   YR ++G LQYLT+TRP+I 
Sbjct: 1177 ANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIA 1236

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            Y VNK+ Q++  P   HW AVKR+LRY+   T  GL + K+   ++ G+SD+DWA   DD
Sbjct: 1237 YSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDD 1296

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            RKST G  +F+G NL+ WS+RKQPTVSRSS EAEY+++A    E++W+++L  EL I   
Sbjct: 1297 RKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSP 1356

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                IW DNL A ++S+NPV
Sbjct: 1357 KAAKIWCDNLGAKYLSANPV 1376



 Score = 74.7 bits (182), Expect(2) = 1e-90
 Identities = 34/64 (53%), Positives = 50/64 (78%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKG+ Q  GID+ D FSPVVK  T+R+IL+IA++R W +RQ+D+ NAFL+G L++  E++
Sbjct: 994  AKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEE--EVY 1051

Query: 181  IHQP 192
            + QP
Sbjct: 1052 MQQP 1055


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  288 bits (736), Expect(2) = 2e-90
 Identities = 143/320 (44%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+E     +YVCKL+KALYG K A + W+ +L + L  LGF  SKADTSLFF        
Sbjct: 436  GYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSI 495

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         S  +    ++  LS  F+LKDLG LH+FLGIEV+ +KDG++L+Q+KY
Sbjct: 496  FLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKY 555

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCF--PDGLLYRQVIGGLQYLTITRPEIT 728
              DLL +V M + K               EG      D   YR V+G LQYLT+TRP+I+
Sbjct: 556  ASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDIS 615

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + +NK+ Q++  P  +HW AVKR+LRY+  T D GL+  +N  L+++GFSD+DWA  PDD
Sbjct: 616  FSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDD 675

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  +F+G NL+ WS+RKQ TVSRSS EAEY++LA A  E++W+++L  EL +   
Sbjct: 676  RRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESP 735

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                +W DNL A ++S+NP+
Sbjct: 736  RAAKLWCDNLGAKYLSANPI 755



 Score = 73.6 bits (179), Expect(2) = 2e-90
 Identities = 32/64 (50%), Positives = 50/64 (78%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           AKG+ Q  GID+ D FSPVVK  T+R++L++A++R W +RQ+D+ NAFL+G L++  E++
Sbjct: 373 AKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEE--EVY 430

Query: 181 IHQP 192
           + QP
Sbjct: 431 MEQP 434


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  290 bits (741), Expect(2) = 3e-90
 Identities = 144/320 (45%), Positives = 202/320 (63%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+E   K  YVCKL+KALYG K A + W+ +L + L  LGF SSK+DTSLFF +      
Sbjct: 1053 GYE--QKDGYVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVAM 1110

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         SS +  + ++ +L+  F+LKDLG LH+FLGIEV  + +GI+LTQ+KY
Sbjct: 1111 FMLVYVDDIIVASSSIDATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNNGIVLTQEKY 1170

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCF--PDGLLYRQVIGGLQYLTITRPEIT 728
              D+L +V+M+D K               EGN F   D   YR ++G LQYLT+TRP+++
Sbjct: 1171 AMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLS 1230

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ QY+  P   HW A KR+LRY+  T   GL++ K+N L+++ FSD+DWA   DD
Sbjct: 1231 FSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDD 1290

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R ST G  +F+G NL+ WS+RKQ TVSRSS EAEY++LA    E++W+++L HEL I   
Sbjct: 1291 RHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAP 1350

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                +W DN+ A +M++NPV
Sbjct: 1351 KIAKVWCDNIGAKYMTANPV 1370



 Score = 70.9 bits (172), Expect(2) = 3e-90
 Identities = 32/64 (50%), Positives = 48/64 (75%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKG+ Q  GID+ D F+PVVK  T+R IL+IA++R W +RQ+D+ NAFL+G L++  ++ 
Sbjct: 990  AKGFKQRYGIDYEDTFNPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEE--DVF 1047

Query: 181  IHQP 192
            + QP
Sbjct: 1048 MRQP 1051


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  287 bits (735), Expect(2) = 3e-90
 Identities = 143/320 (44%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+E     +YVCKL+KALYG K A + W+ +L + L  LGF  SKADTSLFF        
Sbjct: 1014 GYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSI 1073

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         S  +    ++  LS  F+LKDLG LH+FLGIEV+ +KDG++L+Q+KY
Sbjct: 1074 FLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKY 1133

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCF--PDGLLYRQVIGGLQYLTITRPEIT 728
              DLL +V M + K               EG      D   YR V+G LQYLT+TRP+I+
Sbjct: 1134 ASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDIS 1193

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + +NK+ Q++  P  +HW AVKR+LRY+  T D GL+  +N  L+++GFSD+DWA  PDD
Sbjct: 1194 FSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDD 1253

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  +F+G NL+ WS+RKQ TVSRSS EAEY++LA A  E++W+++L  EL +   
Sbjct: 1254 RRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESP 1313

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                +W DNL A ++S+NP+
Sbjct: 1314 RAAKLWCDNLGAKYLSANPI 1333



 Score = 73.2 bits (178), Expect(2) = 3e-90
 Identities = 32/64 (50%), Positives = 50/64 (78%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKG+ Q  GID+ D FSPVVK  T+R++L++A++R W +RQ+D+ NAFL+G L++  E++
Sbjct: 951  AKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEE--EVY 1008

Query: 181  IHQP 192
            + QP
Sbjct: 1009 MKQP 1012


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  286 bits (731), Expect(2) = 3e-90
 Identities = 144/320 (45%), Positives = 198/320 (61%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+E     DYVCKL+KALYG K A + W+ KL   LQ LGF  SKADTSLFF N      
Sbjct: 877  GYEDKVHPDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLII 936

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         S  + +  ++  L   F+LKDLG LH+FLGIEVN    GI+LTQ+KY
Sbjct: 937  FVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKY 996

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFP--DGLLYRQVIGGLQYLTITRPEIT 728
            + DLL +V MTD K               EG+     D   YR V+G LQYLT+TRP+I 
Sbjct: 997  VTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIY 1056

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ Q++  P   HW A+KR+LRY+   T  GL++ K+  ++++G+SD+DWA + DD
Sbjct: 1057 FPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDD 1116

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  +F+G NL+ W+++KQ TV RSS E+EY++LA A  E++W+++L  EL +P  
Sbjct: 1117 RRSTGGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSP 1176

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                +W DNL A ++SSNPV
Sbjct: 1177 PMARLWCDNLGAKYLSSNPV 1196



 Score = 74.3 bits (181), Expect(2) = 3e-90
 Identities = 34/64 (53%), Positives = 50/64 (78%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           AKG+ Q  GID+ D FSPVVK  T+R+IL+IA++R W +RQ+D+ NAFL+G L++  E++
Sbjct: 814 AKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILEE--EVY 871

Query: 181 IHQP 192
           + QP
Sbjct: 872 MKQP 875


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  286 bits (731), Expect(2) = 2e-89
 Identities = 147/320 (45%), Positives = 197/320 (61%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            GFE P K  +VCKL+KALYG K A + WF +L   L  LGF  SKADTSLFF N      
Sbjct: 796  GFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITM 855

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         SS +    ++ +L   F+LKDLG LH+FLGIEV+ +++GI+L Q KY
Sbjct: 856  FVLVYVDDIIVASSSEKATAALLQNLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKY 915

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCF--PDGLLYRQVIGGLQYLTITRPEIT 728
              DLL KV M D K               EG+     D   YR V+G LQYLT+TRP+I 
Sbjct: 916  ANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIA 975

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ Q++  P   HW AVKR+LRY+   T  GL++ K+   +++GFSD+DWA   DD
Sbjct: 976  FSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDD 1035

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  IF+G NL+ W++RKQ TVSRSS E+EY+++A A  E++W+++L  EL+I   
Sbjct: 1036 RRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSP 1095

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                IW DNL A ++S+NPV
Sbjct: 1096 KAAKIWCDNLGAKYLSANPV 1115



 Score = 72.0 bits (175), Expect(2) = 2e-89
 Identities = 32/64 (50%), Positives = 50/64 (78%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           AKG+ Q  GID+ D FSPVVK  T+R+IL++A+++ W +RQ+D+ NAFL+G L++  E++
Sbjct: 733 AKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEE--EVY 790

Query: 181 IHQP 192
           + QP
Sbjct: 791 MLQP 794


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  283 bits (724), Expect(2) = 2e-89
 Identities = 139/320 (43%), Positives = 197/320 (61%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+E P   DYVCKL+KALYG K A + W+ +L   L  LGF  SKADTSLFF N  +   
Sbjct: 1052 GYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDLGFKGSKADTSLFFYNKGSLTI 1111

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         S  E +  ++  L   F+LKDLG LH+FLGIEV  +  GI+++Q+KY
Sbjct: 1112 FLLIYVDDIIVVSSRKEAVSALLQDLQKEFALKDLGDLHYFLGIEVTKIPGGILMSQEKY 1171

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFP--DGLLYRQVIGGLQYLTITRPEIT 728
              DLL +V+M+D K               +G      D   YR ++G LQYLT+TR +I 
Sbjct: 1172 ASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGALQYLTLTRLDIA 1231

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ Q++ NP   HW AVKR+LRYI   T  GL++ K++ ++++G+SD+DWA   DD
Sbjct: 1232 FSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDD 1291

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  +++G NL+ W+++KQ TVSRSS EAEY++LA A  E++W+++L  EL I   
Sbjct: 1292 RRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSP 1351

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                +W DN+ A ++S NPV
Sbjct: 1352 AMAQLWCDNMGAKYLSFNPV 1371



 Score = 74.7 bits (182), Expect(2) = 2e-89
 Identities = 34/64 (53%), Positives = 50/64 (78%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKG+ Q  GID+ D FSPVVK  T+R+IL+IA++R W +RQ+D+ NAFL+G L++  E++
Sbjct: 989  AKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQLDVQNAFLHGVLEE--EVY 1046

Query: 181  IHQP 192
            + QP
Sbjct: 1047 MKQP 1050


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  288 bits (736), Expect(2) = 2e-89
 Identities = 144/320 (45%), Positives = 202/320 (63%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+E   K  YVCKL+KALYG K A + W+ +L + L  LGF SSK+DTSLFF +      
Sbjct: 653  GYE--QKDGYVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVTI 710

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         SS    + ++ +L+  F+LKDLG LH+FLGIEV  + DGI+LTQ+KY
Sbjct: 711  FMLVYVDDIIVASSSIVATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNDGIVLTQEKY 770

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCF--PDGLLYRQVIGGLQYLTITRPEIT 728
              D+L +V+M+D K               EGN     D   YR ++G LQYLT+TRP+++
Sbjct: 771  AMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTLTRPDLS 830

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ QY+      HW A KR+LRY+  T   GL++ K+N L+++ FSD+DWA   DD
Sbjct: 831  FSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDD 890

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  +F+G NL+ WS+RKQ TVSRSS EAEY++LA A  E++W+++L HEL I + 
Sbjct: 891  RRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVP 950

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                +W DN+ A +M++NPV
Sbjct: 951  KIAKVWCDNIGAKYMTANPV 970



 Score = 70.1 bits (170), Expect(2) = 2e-89
 Identities = 32/64 (50%), Positives = 47/64 (73%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           AKG+ Q  GID+ D F PVVK  T+R IL+IA++R W +RQ+D+ NAFL+G L++  ++ 
Sbjct: 590 AKGFKQRYGIDYEDTFRPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEE--DVF 647

Query: 181 IHQP 192
           + QP
Sbjct: 648 MRQP 651


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  285 bits (730), Expect(2) = 2e-89
 Identities = 149/318 (46%), Positives = 198/318 (62%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+  P    +VC+L +ALYG K A + WF +  S L   GF SS+AD+SLFF +SS    
Sbjct: 969  GYTDPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLKHGFHSSQADSSLFFYHSSLGTV 1028

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                       TGS+   +   I  LS+ FS+KDLG LH+FLG+EV   + G+ L+Q KY
Sbjct: 1029 YLLLYVDDMIITGSTPSLVHTFITRLSNEFSMKDLGDLHYFLGVEVQANEKGLFLSQTKY 1088

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFPDGLLYRQVIGGLQYLTITRPEITYE 734
              DLL +  M DAK               EG  F D  L+R + G LQYLTITRP++++ 
Sbjct: 1089 ALDLLQRASMIDAKPISTPFVVGQHLSA-EGTLFSDPTLFRSLAGALQYLTITRPDLSFS 1147

Query: 735  VNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDDRK 914
            VN + Q+M  P + H++A+KR+LRY+ GT  +GLQL K +   + G+SD+DWA  PD R+
Sbjct: 1148 VNSIFQFMHAPTEDHFRALKRILRYVKGTAHHGLQLHKQSTRDLLGYSDADWAGCPDTRR 1207

Query: 915  STSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLSYP 1094
            ST+G+ IF G NLI WSS+KQ TVSRSSAEAEYRSLA A  ++ W+  L  +L + LS P
Sbjct: 1208 STTGYAIFFGANLISWSSKKQSTVSRSSAEAEYRSLAVATADIAWIIQLLRDLHVTLSVP 1267

Query: 1095 PVIWVDNLSAVFMSSNPV 1148
            P I  DN SA+FM+ NPV
Sbjct: 1268 PKILCDNQSAIFMAVNPV 1285



 Score = 72.0 bits (175), Expect(2) = 2e-89
 Identities = 31/64 (48%), Positives = 50/64 (78%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            A+G++Q+ G+DF D FSPVV+P TVR+IL++A+   W + Q+D+ NAFL+G L++  E++
Sbjct: 906  AQGFSQVHGLDFGDTFSPVVRPATVRIILSLAVTSGWRLHQLDVKNAFLHGFLNE--EVY 963

Query: 181  IHQP 192
            + QP
Sbjct: 964  MEQP 967


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  279 bits (713), Expect(2) = 3e-89
 Identities = 145/322 (45%), Positives = 195/322 (60%)
 Frame = +3

Query: 183  TSATGFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSS 362
            T   GF  P    YVCKL+KALYG K A + WF KLR  L   GF SS+ADTSLF  +++
Sbjct: 984  TQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTA 1043

Query: 363  TSXXXXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILT 542
            T              TGS+   +   I+ L + F+L+DLG L +FLGI+   +   + L 
Sbjct: 1044 TDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLN 1103

Query: 543  QKKYIQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFPDGLLYRQVIGGLQYLTITRPE 722
            Q KYI DLL +  M  +K             + +G    D   YR+ +G LQY+T+TRP+
Sbjct: 1104 QHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPD 1163

Query: 723  ITYEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDP 902
            I + VNK  Q+M  P D HW AVKR+LRY+ GT   GL       + + G+SD+DWAS P
Sbjct: 1164 IAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCP 1223

Query: 903  DDRKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIP 1082
            DDR+STSG+C+F+G NLI WSS KQ  VS+SSAE+EYR L +   E++W++SL  EL +P
Sbjct: 1224 DDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLP 1283

Query: 1083 LSYPPVIWVDNLSAVFMSSNPV 1148
             S PP++W DN SA  +++NPV
Sbjct: 1284 TS-PPILWCDNQSAAHLAANPV 1304



 Score = 78.2 bits (191), Expect(2) = 3e-89
 Identities = 35/64 (54%), Positives = 51/64 (79%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            A+G+TQ  GID+ D FSPVVKP T+RLIL +A++  W +RQ+D++NAFLNG+L++  E+ 
Sbjct: 925  AQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNGDLEE--EVF 982

Query: 181  IHQP 192
            + QP
Sbjct: 983  MTQP 986


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  285 bits (728), Expect(2) = 4e-89
 Identities = 147/320 (45%), Positives = 195/320 (60%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            GFE P K  +VCKL+KALYG K A + WF +L   L  LGF  SKADTSLFF N      
Sbjct: 1067 GFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITM 1126

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         SS      ++  L   F+LKDLG LH+FLGIEV+ +++GI+L Q KY
Sbjct: 1127 FVLVYVDDIIVASSSERATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKY 1186

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCF--PDGLLYRQVIGGLQYLTITRPEIT 728
              DLL KV M D K               EG+     D   YR V+G LQYLT+TRP+I 
Sbjct: 1187 ANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIA 1246

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ Q++  P   HW AVKR+LRY+   T  GL++ K+   +++GFSD+DWA   DD
Sbjct: 1247 FSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDD 1306

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  IF+G NL+ W++RKQ TVSRSS E+EY+++A A  E++W+++L  EL+I   
Sbjct: 1307 RRSTGGFAIFLGSNLVSWNARKQATVSRSSIESEYKAIANATAEIMWVQTLLAELEIKSP 1366

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                IW DNL A ++S+NPV
Sbjct: 1367 KAAKIWCDNLGAKYLSANPV 1386



 Score = 72.0 bits (175), Expect(2) = 4e-89
 Identities = 32/64 (50%), Positives = 50/64 (78%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKG+ Q  GID+ D FSPVVK  T+R+IL++A+++ W +RQ+D+ NAFL+G L++  E++
Sbjct: 1004 AKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEE--EVY 1061

Query: 181  IHQP 192
            + QP
Sbjct: 1062 MLQP 1065


>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
          Length = 1379

 Score =  280 bits (717), Expect(2) = 5e-89
 Identities = 142/318 (44%), Positives = 200/318 (62%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+  P    +VCKL KALYG K A + WF +  S L  LGF  S+ADTSLF         
Sbjct: 407  GYVDPRHPLHVCKLKKALYGLKQAPRAWFQRFSSFLLKLGFFCSRADTSLFVFTKKDDLI 466

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                       TG++   I+R I+ L S F++KDLG L +FLG+EV+Y+ DG  L+Q KY
Sbjct: 467  YLLLYVDDIILTGNNPALINRFISQLHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKY 526

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFPDGLLYRQVIGGLQYLTITRPEITYE 734
              D+LA+  + D+K               EG  F D  LYR ++G LQYLTITRP + + 
Sbjct: 527  ATDILARAQLLDSKPVPTPMIVSQRLSS-EGTPFADPTLYRSLVGALQYLTITRPNLAHS 585

Query: 735  VNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDDRK 914
            +N +SQ++  P + H++AVKR+LRY+ GT  +GL+    + + +  +SD+DWA  PD R+
Sbjct: 586  INSVSQFLHAPTEVHFQAVKRILRYVQGTLHFGLKFTSCSSMGLVAYSDADWAGCPDTRR 645

Query: 915  STSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLSYP 1094
            STSG+ IF+G NL+ WS++KQPTVSRSS E+EYR+LA    +VLWL  L  +L++ L++ 
Sbjct: 646  STSGYSIFLGNNLVSWSAKKQPTVSRSSCESEYRALALTAAKVLWLTHLLRDLRVTLTHR 705

Query: 1095 PVIWVDNLSAVFMSSNPV 1148
            P++  DN SA+F+SSNPV
Sbjct: 706  PLLLCDNKSAIFLSSNPV 723



 Score = 75.9 bits (185), Expect(2) = 5e-89
 Identities = 34/65 (52%), Positives = 50/65 (76%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           AKGYTQ+ G+D+ D FSPVVK  TVR++L++A++  W +RQ+D+ NAFLNG L +   ++
Sbjct: 344 AKGYTQLPGLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQLDVKNAFLNGILHE--TVY 401

Query: 181 IHQPL 195
           + QPL
Sbjct: 402 MEQPL 406


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  286 bits (732), Expect(2) = 5e-89
 Identities = 144/318 (45%), Positives = 203/318 (63%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            GF       +VCKLNKALYG K A + W++KL + L   GF +S+AD+S+F  +S+    
Sbjct: 841  GFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVL 900

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                       TGSS+  +   I  L+S F+L+DLG +++FLGIEV        L+Q KY
Sbjct: 901  ILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKY 960

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFPDGLLYRQVIGGLQYLTITRPEITYE 734
             QDLL++  M D+K               +G  F D  LYR  +G LQYLT+TRP+I++ 
Sbjct: 961  TQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFA 1020

Query: 735  VNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDDRK 914
            VNK  Q+M  P  +HW AVKR+LRY+ GT  YG+Q+ ++  L I G++D+DWAS PDDR+
Sbjct: 1021 VNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRR 1080

Query: 915  STSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLSYP 1094
            ST G+ IF+G NL+ WSS KQ  VSRSSAE+EYR+LA+A +E++W++ +  EL +  S P
Sbjct: 1081 STGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSP 1140

Query: 1095 PVIWVDNLSAVFMSSNPV 1148
            P++W DN SA  +++NPV
Sbjct: 1141 PLLWCDNKSAAHLAANPV 1158



 Score = 70.1 bits (170), Expect(2) = 5e-89
 Identities = 29/64 (45%), Positives = 48/64 (75%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           A+G+TQ  G+++ + FSPVVK  T+R+IL +AL+ NW + Q+D+ NAFL+G+L++   + 
Sbjct: 778 AQGFTQTLGLBYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEE--HVF 835

Query: 181 IHQP 192
           + QP
Sbjct: 836 MQQP 839


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  283 bits (725), Expect(2) = 8e-89
 Identities = 146/320 (45%), Positives = 195/320 (60%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            GFE P K  +VCKL+KALYG K A + WF +L   L  LGF  SK DTSLFF N      
Sbjct: 1074 GFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITM 1133

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                         SS +    ++  L   F+LKDLG LH+FLGIEV+ +++GI+L Q KY
Sbjct: 1134 FVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKY 1193

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCF--PDGLLYRQVIGGLQYLTITRPEIT 728
              DLL KV M D K               EG+     D   YR V+G LQYLT+TRP+I 
Sbjct: 1194 ANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIA 1253

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ Q++  P   HW AVKR+LRY+   T  GL++ K+   +++GFSD+DWA   DD
Sbjct: 1254 FSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDD 1313

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  IF+G NL+ W++RKQ TVSRSS E+EY+++A A  E++W+++L  EL+I   
Sbjct: 1314 RRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSP 1373

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                IW DNL A ++S+NPV
Sbjct: 1374 KAAKIWCDNLGAKYLSANPV 1393



 Score = 72.0 bits (175), Expect(2) = 8e-89
 Identities = 32/64 (50%), Positives = 50/64 (78%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKG+ Q  GID+ D FSPVVK  T+R+IL++A+++ W +RQ+D+ NAFL+G L++  E++
Sbjct: 1011 AKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEE--EVY 1068

Query: 181  IHQP 192
            + QP
Sbjct: 1069 MLQP 1072


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  278 bits (710), Expect(2) = 1e-88
 Identities = 138/318 (43%), Positives = 195/318 (61%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+  P   + VC+L KALYG K A + WF +L S L   GF  S+ D+S+F      +  
Sbjct: 1017 GYFDPQFPNRVCRLKKALYGLKQAPRAWFQRLSSALLQWGFSMSRTDSSMFLHFGKATTL 1076

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                       TGSS+  I  +I  L S F+L+DLG L FFLGIEV+Y +  + L+Q KY
Sbjct: 1077 IVLVYVDDILVTGSSSTQISSLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKY 1136

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFPDGLLYRQVIGGLQYLTITRPEITYE 734
            I DLL +  + D K             +F+G+   D   YR V+G LQY+T+TRP+I + 
Sbjct: 1137 ISDLLHRTELFDTKPANTPGAVGKNLSKFDGDPMTDVTHYRSVVGALQYVTLTRPDIAFA 1196

Query: 735  VNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDDRK 914
            VNK  Q+MQ P  +HW +VKR+LRY+ GT   GL    +++L I GF+D+DW +  DDR+
Sbjct: 1197 VNKACQFMQQPTTAHWLSVKRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRR 1256

Query: 915  STSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLSYP 1094
            S+SG+ +++G NL+ WSS KQ  VSRSSAE+EYR L  A  E++W+++L  EL +P+   
Sbjct: 1257 SSSGYLVYLGGNLVSWSSTKQKVVSRSSAESEYRGLVFATAEIVWMQALLQELCVPIPAI 1316

Query: 1095 PVIWVDNLSAVFMSSNPV 1148
            P++W DN+SA  M+ NPV
Sbjct: 1317 PLLWYDNISAYHMAKNPV 1334



 Score = 77.4 bits (189), Expect(2) = 1e-88
 Identities = 35/64 (54%), Positives = 50/64 (78%)
 Frame = +1

Query: 1    AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
            AKGY Q  G+D+ + FSPVVK  T+R+ILT+AL+  W IRQ+D+ NAFLNGEL++  +++
Sbjct: 954  AKGYNQTHGLDYFETFSPVVKAATIRIILTVALSFKWEIRQLDVHNAFLNGELEE--QVY 1011

Query: 181  IHQP 192
            + QP
Sbjct: 1012 MSQP 1015


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  281 bits (720), Expect(2) = 1e-88
 Identities = 143/320 (44%), Positives = 195/320 (60%), Gaps = 2/320 (0%)
 Frame = +3

Query: 195  GFEIPDKSDYVCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXX 374
            G+E      YVCKL+KALYG K A + W+ +L   L  +GF  SKADTSLFF N      
Sbjct: 868  GYEDSSLPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLII 927

Query: 375  XXXXXXXXXXXTGSSNEDIDRVINSLSSYFSLKDLGALHFFLGIEVNYMKDGIILTQKKY 554
                       T S  E +  ++  L   F+LKDLG LH+FLGIEV  +  GI+LTQ KY
Sbjct: 928  FVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKY 987

Query: 555  IQDLLAKVHMTDAKGXXXXXXXXXXXXRFEGNCFP--DGLLYRQVIGGLQYLTITRPEIT 728
            + DLL +V+M D K               EG+     D   YR V+G LQYLT+TRP+I 
Sbjct: 988  VNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIA 1047

Query: 729  YEVNKLSQYMQNPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDD 908
            + VNK+ Q++  P   HW AVKR+LRY+   T  GL+L K+  ++++ +SD+DWA   DD
Sbjct: 1048 FPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDD 1107

Query: 909  RKSTSGHCIFVGKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLS 1088
            R+ST G  +F+G NL+ WS+RKQ TVSRSS E+EY++LA A  E++W+++L  ELQ+   
Sbjct: 1108 RRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESP 1167

Query: 1089 YPPVIWVDNLSAVFMSSNPV 1148
                +W DNL A ++S+NPV
Sbjct: 1168 SMAKLWCDNLGAKYLSANPV 1187



 Score = 73.2 bits (178), Expect(2) = 1e-88
 Identities = 33/64 (51%), Positives = 50/64 (78%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           AKG+ Q  GID+ D FSPVVK  T+R+IL+IA+++ W +RQ+D+ NAFL+G L++  E++
Sbjct: 805 AKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEE--EVY 862

Query: 181 IHQP 192
           + QP
Sbjct: 863 MKQP 866


>emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera]
          Length = 1124

 Score =  284 bits (727), Expect(2) = 1e-88
 Identities = 150/308 (48%), Positives = 193/308 (62%), Gaps = 1/308 (0%)
 Frame = +3

Query: 225  VCKLNKALYGSK*ASKTWFDKLRSVLQSLGFCSSKADTSLFFRNSSTSXXXXXXXXXXXX 404
            VCKL+K LYG K A + WFDKL+  LQ  GF S+K+D SLF R ++ S            
Sbjct: 641  VCKLHKTLYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIV 700

Query: 405  XTGSSNEDIDRVINSLSSYFSLKDL-GALHFFLGIEVNYMKDGIILTQKKYIQDLLAKVH 581
             TGSS+++I  +I+ LS  FSLKDL G LH               L++KKYIQDLL K  
Sbjct: 701  VTGSSSQEIHELISRLSGLFSLKDLDGGLH---------------LSKKKYIQDLLKKTK 745

Query: 582  MTDAKGXXXXXXXXXXXXRFEGNCFPDGLLYRQVIGGLQYLTITRPEITYEVNKLSQYMQ 761
            M  AK                G+   +   YR V+G LQY+TITRPEI + VNK+ Q+MQ
Sbjct: 746  MDGAKSLPTLMLSGLKLLTGTGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQ 805

Query: 762  NPLDSHWKAVKRLLRYIYGTTDYGLQLFKNNHLVITGFSDSDWASDPDDRKSTSGHCIFV 941
             PLD+HWK VKR+LRY+ GTTD G+ L  +  + + GF D DW SD DDR+STSGHC+F+
Sbjct: 806  KPLDTHWKTVKRILRYLNGTTDLGIVLKPSETMNLVGFCDVDWGSDVDDRRSTSGHCVFL 865

Query: 942  GKNLICWSSRKQPTVSRSSAEAEYRSLATAMTEVLWLKSLFHELQIPLSYPPVIWVDNLS 1121
            G NL+ WSS+K  T+SRSS EAEYRSLA+  +E+LWL+SL  E Q  ++    IW DN+S
Sbjct: 866  GXNLVSWSSKKLHTISRSSTEAEYRSLASLTSEMLWLQSLLSEFQTKMTMVSXIWCDNIS 925

Query: 1122 AVFMSSNP 1145
             V +S+NP
Sbjct: 926  TVSLSANP 933



 Score = 70.5 bits (171), Expect(2) = 1e-88
 Identities = 31/63 (49%), Positives = 48/63 (76%)
 Frame = +1

Query: 1   AKGYTQIAGIDFTDVFSPVVKPPTVRLILTIALARNWFIRQIDIDNAFLNGELDQGTEIH 180
           AKGY Q+   DF+  FS VVKP T+R++L +A++++W IR +D++NAFLNGEL +  E++
Sbjct: 566 AKGYFQVPSFDFSKTFSLVVKPTTIRVVLAVAVSQSWSIRXLDVNNAFLNGELQE--EVY 623

Query: 181 IHQ 189
           + Q
Sbjct: 624 MDQ 626