BLASTX nr result
ID: Rehmannia24_contig00018656
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00018656
(1046 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ... 115 5e-51
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ... 119 7e-50
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19... 115 9e-50
ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair ... 114 9e-50
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ... 116 3e-49
emb|CBI36057.3| unnamed protein product [Vitis vinifera] 112 8e-48
ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495... 114 9e-46
ref|XP_006595124.1| PREDICTED: DNA repair/transcription protein ... 115 3e-45
ref|XP_006595125.1| PREDICTED: DNA repair/transcription protein ... 115 3e-45
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ... 106 3e-45
gb|EOY26932.1| MMS19 nucleotide excision repair protein, putativ... 107 6e-45
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik... 112 6e-45
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr... 107 1e-44
ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair ... 111 4e-44
ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair ... 111 4e-44
ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair ... 111 4e-44
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ... 111 4e-44
gb|ESW22599.1| hypothetical protein PHAVU_005G166100g [Phaseolus... 108 8e-44
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ... 106 2e-43
ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Popu... 108 2e-43
>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 1147
Score = 115 bits (287), Expect(2) = 5e-51
Identities = 61/120 (50%), Positives = 77/120 (64%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
AI+RPLYKQRFFST+MPIF MLY+A+AHV+SDTP T
Sbjct: 964 AIVRPLYKQRFFSTMMPIFQTLVSKSDTSLSRYMLYQAYAHVISDTPLTAILSDAKKFIP 1023
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
D L LS + +NK ++Y++LLV+SGIL++KNGQEA ENA IVD L LT +SH+M
Sbjct: 1024 MLLDGLLTLSVNGINKDVVYSLLLVLSGILMDKNGQEAVTENAHKIVDCLAGLTDFSHMM 1083
Score = 114 bits (285), Expect(2) = 5e-51
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = +1
Query: 376 SYFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWAS 555
S+ VRETAIQCLVAVSELPHARIYP+R +VL SKALDDPKR VRQEAVRCRQAWAS
Sbjct: 1080 SHMMLVRETAIQCLVAVSELPHARIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWAS 1139
Query: 556 IATRSLHF 579
IA+RSLHF
Sbjct: 1140 IASRSLHF 1147
>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
tuberosum]
Length = 1170
Score = 119 bits (297), Expect(2) = 7e-50
Identities = 57/120 (47%), Positives = 80/120 (66%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
AI+RPLYKQRFF+ +MP+F LY+AFAH++S+TP
Sbjct: 987 AIVRPLYKQRFFNIMMPMFLSAIVKCDSSTSRCFLYQAFAHLVSETPLVAVVGDAKKVLP 1046
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DC +LSKD+ +K+IIY+VL+V+SGIL +KNGQEA +ENAP ++ +LIELT+Y ++M
Sbjct: 1047 VLMDCFLVLSKDISHKEIIYSVLIVLSGILTDKNGQEAIIENAPMVIRRLIELTSYPYVM 1106
Score = 106 bits (265), Expect(2) = 7e-50
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = +1
Query: 379 YFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
Y +RETAIQCL A+SELPHARIYP+RT+VL+A +KALDDPKR VR EAV+CR AWASI
Sbjct: 1104 YVMVIRETAIQCLGAMSELPHARIYPMRTQVLQAITKALDDPKRAVRLEAVKCRLAWASI 1163
Query: 559 ATRSLHF 579
A+RS+HF
Sbjct: 1164 ASRSIHF 1170
>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
communis] gi|223544868|gb|EEF46383.1| DNA
repair/transcription protein met18/mms19, putative
[Ricinus communis]
Length = 1174
Score = 115 bits (287), Expect(2) = 9e-50
Identities = 60/120 (50%), Positives = 77/120 (64%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
AI+RPLYKQRFFS+IMPI +LYRAFAHV+SDTP +
Sbjct: 991 AIVRPLYKQRFFSSIMPILYPLITKSDSSFSKSLLYRAFAHVISDTPLSVISNDAKKLVP 1050
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
D L++L KDV++K I+Y +LLV+SGIL + NG+EA +ENA I+ LIEL AY H+M
Sbjct: 1051 VLLDGLTLLGKDVLDKDIMYGLLLVLSGILTDTNGKEAVIENAHIIIKCLIELVAYPHMM 1110
Score = 110 bits (274), Expect(2) = 9e-50
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +1
Query: 379 YFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
+ +RETA+QCLVA+SELPH RIYP+R +VL+A SKALDDPKR VRQEAVRCRQAWASI
Sbjct: 1108 HMMLIRETAVQCLVAMSELPHTRIYPVRIQVLQAISKALDDPKRAVRQEAVRCRQAWASI 1167
Query: 559 ATRSLHF 579
A+RSLH+
Sbjct: 1168 ASRSLHY 1174
>ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 914
Score = 114 bits (285), Expect(2) = 9e-50
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = +1
Query: 376 SYFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWAS 555
S+ VRETAIQCLVAVSELPHARIYP+R +VL SKALDDPKR VRQEAVRCRQAWAS
Sbjct: 847 SHMMLVRETAIQCLVAVSELPHARIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWAS 906
Query: 556 IATRSLHF 579
IA+RSLHF
Sbjct: 907 IASRSLHF 914
Score = 110 bits (276), Expect(2) = 9e-50
Identities = 61/120 (50%), Positives = 77/120 (64%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
AI+RPLYKQRFFST+MPIF MLY+A+AHV+SDTP T
Sbjct: 733 AIVRPLYKQRFFSTMMPIFQTLVSKSDTSRY--MLYQAYAHVISDTPLTAILSDAKKFIP 790
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
D L LS + +NK ++Y++LLV+SGIL++KNGQEA ENA IVD L LT +SH+M
Sbjct: 791 MLLDGLLTLSVNGINKDVVYSLLLVLSGILMDKNGQEAVTENAHKIVDCLAGLTDFSHMM 850
>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
lycopersicum]
Length = 1153
Score = 116 bits (291), Expect(2) = 3e-49
Identities = 56/120 (46%), Positives = 79/120 (65%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
AI+RPLYKQRFF+ +MP+F LY+AFAH++S+TP
Sbjct: 970 AIVRPLYKQRFFNIMMPMFLSAIAKCDSSTSRCFLYQAFAHLVSETPLVAVVGDAKKVLP 1029
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DC +LSKD+ +K+IIY+VL+V+SGIL +KNGQE +ENAP ++ +LIELT+Y ++M
Sbjct: 1030 VLMDCFLILSKDISHKEIIYSVLIVLSGILTDKNGQETIIENAPMVIRRLIELTSYPYMM 1089
Score = 107 bits (266), Expect(2) = 3e-49
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = +1
Query: 379 YFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
Y +RETAIQC A+SELPHARIYP+RT+VL+A +KALDDPKR+VR EAV+CR AWASI
Sbjct: 1087 YMMVIRETAIQCFGAMSELPHARIYPMRTQVLQAITKALDDPKRVVRLEAVKCRLAWASI 1146
Query: 559 ATRSLHF 579
A+RS+HF
Sbjct: 1147 ASRSIHF 1153
>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
Length = 1146
Score = 112 bits (279), Expect(2) = 8e-48
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +1
Query: 379 YFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
+ VRETAIQCLVA+S LPHARIYP+RT+VLR+ KALDDPKR VR EAVRCRQAWASI
Sbjct: 1080 HMMVVRETAIQCLVAMSRLPHARIYPMRTQVLRSVQKALDDPKRAVRHEAVRCRQAWASI 1139
Query: 559 ATRSLHF 579
A+RSLHF
Sbjct: 1140 ASRSLHF 1146
Score = 106 bits (265), Expect(2) = 8e-48
Identities = 57/120 (47%), Positives = 73/120 (60%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRFFS+++PI MLYRA AH++SDTP
Sbjct: 963 ANIRPLYKQRFFSSVLPILVSSMAESRLSNTRSMLYRALAHIISDTPLIAVLSEAKKIIP 1022
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
D LS+LS ++K I+YN+LLV+SGIL++KNGQE VENA I++ LI L Y H+M
Sbjct: 1023 ILLDSLSILSTYNLDKDILYNLLLVLSGILMDKNGQETVVENAHVIINCLIGLVGYPHMM 1082
>ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495813 [Cicer arietinum]
Length = 1138
Score = 114 bits (286), Expect(2) = 9e-46
Identities = 60/116 (51%), Positives = 74/116 (63%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRFFSTI+PIF LYRAFAHV+SDTP
Sbjct: 954 ATIRPLYKQRFFSTILPIFQQLITRSDSPLSRSFLYRAFAHVMSDTPLIVIVNEAKKLIP 1013
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAY 350
DCLS+L++D+ +K I+Y +LLV+SGIL EKNGQEA +ENA I++ LI+L Y
Sbjct: 1014 VLLDCLSLLTEDIEDKDILYGLLLVLSGILTEKNGQEAVIENAHIIINCLIKLVDY 1069
Score = 97.1 bits (240), Expect(2) = 9e-46
Identities = 50/64 (78%), Positives = 56/64 (87%), Gaps = 1/64 (1%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI-ATR 567
VRETAIQCLVA+S LPHARIYPLRT+VLRA K LDD KR VR+EAV+CRQAWASI ++R
Sbjct: 1075 VRETAIQCLVALSMLPHARIYPLRTQVLRAIPKCLDDTKRSVRREAVKCRQAWASITSSR 1134
Query: 568 SLHF 579
SL F
Sbjct: 1135 SLRF 1138
>ref|XP_006595124.1| PREDICTED: DNA repair/transcription protein mms19-like isoform X1
[Glycine max]
Length = 1132
Score = 115 bits (289), Expect(2) = 3e-45
Identities = 60/120 (50%), Positives = 76/120 (63%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A+IRPLYKQRF S++MPI LYRAFAH+LSDTP
Sbjct: 956 AMIRPLYKQRFSSSVMPILQQIITKSHSSLSRSFLYRAFAHILSDTPMVAILSEAKKLIP 1015
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DCLSML++D+ +K ++Y +LLV+SGIL EKNGQEAA+ENA I++ LI+L Y H M
Sbjct: 1016 VLLDCLSMLTEDIQDKDMLYGLLLVLSGILTEKNGQEAAIENAHIIINCLIKLVDYPHKM 1075
Score = 94.4 bits (233), Expect(2) = 3e-45
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWAS 555
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS
Sbjct: 1077 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWAS 1131
>ref|XP_006595125.1| PREDICTED: DNA repair/transcription protein mms19-like isoform X2
[Glycine max]
Length = 1013
Score = 115 bits (289), Expect(2) = 3e-45
Identities = 60/120 (50%), Positives = 76/120 (63%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A+IRPLYKQRF S++MPI LYRAFAH+LSDTP
Sbjct: 837 AMIRPLYKQRFSSSVMPILQQIITKSHSSLSRSFLYRAFAHILSDTPMVAILSEAKKLIP 896
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DCLSML++D+ +K ++Y +LLV+SGIL EKNGQEAA+ENA I++ LI+L Y H M
Sbjct: 897 VLLDCLSMLTEDIQDKDMLYGLLLVLSGILTEKNGQEAAIENAHIIINCLIKLVDYPHKM 956
Score = 94.4 bits (233), Expect(2) = 3e-45
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWAS 555
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS
Sbjct: 958 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWAS 1012
>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Citrus sinensis]
Length = 1151
Score = 106 bits (264), Expect(2) = 3e-45
Identities = 51/67 (76%), Positives = 59/67 (88%)
Frame = +1
Query: 379 YFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
+ VRETAIQCLVA+S LPHARIYP+R +VL+A S+ALDDPKR VRQEAVRCRQAWAS
Sbjct: 1085 HMMLVRETAIQCLVAMSGLPHARIYPMRRQVLQAVSRALDDPKRAVRQEAVRCRQAWAST 1144
Query: 559 ATRSLHF 579
A+RSL+F
Sbjct: 1145 ASRSLYF 1151
Score = 103 bits (257), Expect(2) = 3e-45
Identities = 57/120 (47%), Positives = 72/120 (60%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRF+STIMPI +L RA AH++SDTP
Sbjct: 968 ATIRPLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHIISDTPLIVVLNDAKTVIP 1027
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
D LS+LS DV +K I+Y++LLV+SGIL +KNGQEA +E A I+D I L +Y H+M
Sbjct: 1028 ILMDGLSILSNDVSDKDIVYSLLLVLSGILTDKNGQEAVIECAHIIIDHSIILISYPHMM 1087
>gb|EOY26932.1| MMS19 nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao]
Length = 1149
Score = 107 bits (267), Expect(2) = 6e-45
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +1
Query: 379 YFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
+ VRETAIQCLVA+S L +AR+YP+RT+VL+A +KALDDPKR VRQEAVRCRQAWASI
Sbjct: 1083 HMMLVRETAIQCLVAISGLSYARVYPMRTQVLQAIAKALDDPKRAVRQEAVRCRQAWASI 1142
Query: 559 ATRSLHF 579
A+RSLHF
Sbjct: 1143 ASRSLHF 1149
Score = 101 bits (252), Expect(2) = 6e-45
Identities = 55/120 (45%), Positives = 74/120 (61%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A+IRPLYKQRFFST+MPI +L RA AH++ DTP
Sbjct: 967 AVIRPLYKQRFFSTMMPILQSLIMKSEPLSRPLLL-RASAHIIVDTPLIVVLSDAKKIIP 1025
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
D LS LS D+++K +IY +LLV+SGIL++KNGQEA ++A +I ++LIEL Y H+M
Sbjct: 1026 MLLDGLSALSNDILDKDVIYGLLLVLSGILMDKNGQEAVSDSAHTITNRLIELIQYPHMM 1085
>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
excision repair protein-like protein [Medicago
truncatula]
Length = 1140
Score = 112 bits (279), Expect(2) = 6e-45
Identities = 57/118 (48%), Positives = 74/118 (62%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A +RPLYKQRFFS++MPIF +L RAFAHV+SDTP
Sbjct: 956 ATVRPLYKQRFFSSMMPIFLQLISRSDSLLSRSLLLRAFAHVMSDTPLIVILNEAKKLIP 1015
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSH 356
DCL ML++D+ +K I+Y +LLV+SG+L EKNGQEA +ENA I++ LI+L Y H
Sbjct: 1016 VLLDCLFMLTEDIQDKDILYGLLLVLSGMLTEKNGQEAVIENAHIIINGLIKLVDYPH 1073
Score = 97.1 bits (240), Expect(2) = 6e-45
Identities = 50/64 (78%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIA-TR 567
VRETAIQCLVA+SELPH RIYPLRT+VL+A K LDD KR VR EAV+CRQAWASIA +R
Sbjct: 1077 VRETAIQCLVALSELPHVRIYPLRTQVLQAIFKCLDDTKRSVRNEAVKCRQAWASIASSR 1136
Query: 568 SLHF 579
SL F
Sbjct: 1137 SLRF 1140
>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
gi|557528866|gb|ESR40116.1| hypothetical protein
CICLE_v10024743mg [Citrus clementina]
Length = 1155
Score = 107 bits (266), Expect(2) = 1e-44
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +1
Query: 379 YFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
+ VRETAIQCLVA+S+LPHARIYP+R +VL+A S+ALDDPKR VRQEAVRCRQAWAS
Sbjct: 1089 HMMLVRETAIQCLVAMSKLPHARIYPMRREVLQAISRALDDPKRAVRQEAVRCRQAWAST 1148
Query: 559 ATRSLHF 579
A+RSL+F
Sbjct: 1149 ASRSLYF 1155
Score = 100 bits (250), Expect(2) = 1e-44
Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRF+STIMPI +L RA AH++SDTP
Sbjct: 968 ATIRPLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHIISDTPLIVVLNDAKTVIP 1027
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKN----GQEAAVENAPSIVDQLIELTAY 350
D LS+LS DV +K I+Y++LLV+SGIL +KN GQEA +E A I+D +I+L +Y
Sbjct: 1028 ILMDGLSILSNDVSDKDIVYSLLLVLSGILTDKNVKTIGQEAVIECAHIIIDHIIKLISY 1087
Query: 351 SHIM 362
H+M
Sbjct: 1088 PHMM 1091
>ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Glycine max]
Length = 1135
Score = 111 bits (278), Expect(2) = 4e-44
Identities = 59/120 (49%), Positives = 75/120 (62%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRFFS++MPI LYRAFAH++SDTP
Sbjct: 960 ATIRPLYKQRFFSSVMPILQQIITKSHSSLSRSFLYRAFAHIMSDTPMVAIVSEAKKLIP 1019
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DCLSML+ ++ +K ++Y +LLV+SGIL+EKNGQEA VENA I++ LI+L Y H M
Sbjct: 1020 VLLDCLSMLT-EIQDKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKM 1078
Score = 94.7 bits (234), Expect(2) = 4e-44
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS+
Sbjct: 1080 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWASM 1135
>ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Glycine max]
Length = 1133
Score = 111 bits (278), Expect(2) = 4e-44
Identities = 59/120 (49%), Positives = 75/120 (62%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRFFS++MPI LYRAFAH++SDTP
Sbjct: 958 ATIRPLYKQRFFSSVMPILQQIITKSHSSLSRSFLYRAFAHIMSDTPMVAIVSEAKKLIP 1017
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DCLSML+ ++ +K ++Y +LLV+SGIL+EKNGQEA VENA I++ LI+L Y H M
Sbjct: 1018 VLLDCLSMLT-EIQDKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKM 1076
Score = 94.7 bits (234), Expect(2) = 4e-44
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS+
Sbjct: 1078 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWASM 1133
>ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X3 [Glycine max]
Length = 1102
Score = 111 bits (278), Expect(2) = 4e-44
Identities = 59/120 (49%), Positives = 75/120 (62%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRFFS++MPI LYRAFAH++SDTP
Sbjct: 927 ATIRPLYKQRFFSSVMPILQQIITKSHSSLSRSFLYRAFAHIMSDTPMVAIVSEAKKLIP 986
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DCLSML+ ++ +K ++Y +LLV+SGIL+EKNGQEA VENA I++ LI+L Y H M
Sbjct: 987 VLLDCLSMLT-EIQDKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKM 1045
Score = 94.7 bits (234), Expect(2) = 4e-44
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS+
Sbjct: 1047 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWASM 1102
>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X4 [Glycine max]
Length = 1095
Score = 111 bits (278), Expect(2) = 4e-44
Identities = 59/120 (49%), Positives = 75/120 (62%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRFFS++MPI LYRAFAH++SDTP
Sbjct: 920 ATIRPLYKQRFFSSVMPILQQIITKSHSSLSRSFLYRAFAHIMSDTPMVAIVSEAKKLIP 979
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DCLSML+ ++ +K ++Y +LLV+SGIL+EKNGQEA VENA I++ LI+L Y H M
Sbjct: 980 VLLDCLSMLT-EIQDKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKM 1038
Score = 94.7 bits (234), Expect(2) = 4e-44
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
VRETAIQCLVA+SELPHARIYP+RT+VLRA SK LDD KR VR EAV+CRQ WAS+
Sbjct: 1040 VRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWASM 1095
>gb|ESW22599.1| hypothetical protein PHAVU_005G166100g [Phaseolus vulgaris]
Length = 1145
Score = 108 bits (271), Expect(2) = 8e-44
Identities = 57/120 (47%), Positives = 72/120 (60%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRFFS++MPIF LYRA AH++SDTP
Sbjct: 963 ATIRPLYKQRFFSSMMPIFLQLITKAYSSLSRSFLYRALAHIISDTPMVAVLNDAKKLIP 1022
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
DC SML++D+ +K ++Y +LLV+S IL EKNGQEA ENA I++ LI+L Y H M
Sbjct: 1023 VLLDCFSMLTEDIQDKDMLYGLLLVLSCILTEKNGQEAVTENAHIIINCLIKLVDYPHKM 1082
Score = 96.3 bits (238), Expect(2) = 8e-44
Identities = 44/61 (72%), Positives = 55/61 (90%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASIATRS 570
VRETAIQCLVA+SELPH+RIYP+RT+VL+A SK LDD +R+VR EAV+CRQ WAS+++R
Sbjct: 1084 VRETAIQCLVALSELPHSRIYPMRTQVLQAISKCLDDTRRVVRYEAVKCRQTWASMSSRG 1143
Query: 571 L 573
L
Sbjct: 1144 L 1144
>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Citrus sinensis]
Length = 1155
Score = 106 bits (264), Expect(2) = 2e-43
Identities = 51/67 (76%), Positives = 59/67 (88%)
Frame = +1
Query: 379 YFQAVRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
+ VRETAIQCLVA+S LPHARIYP+R +VL+A S+ALDDPKR VRQEAVRCRQAWAS
Sbjct: 1089 HMMLVRETAIQCLVAMSGLPHARIYPMRRQVLQAVSRALDDPKRAVRQEAVRCRQAWAST 1148
Query: 559 ATRSLHF 579
A+RSL+F
Sbjct: 1149 ASRSLYF 1155
Score = 97.8 bits (242), Expect(2) = 2e-43
Identities = 57/124 (45%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
A IRPLYKQRF+STIMPI +L RA AH++SDTP
Sbjct: 968 ATIRPLYKQRFYSTIMPILQSLIIKSNSSFSRSILCRACAHIISDTPLIVVLNDAKTVIP 1027
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKN----GQEAAVENAPSIVDQLIELTAY 350
D LS+LS DV +K I+Y++LLV+SGIL +KN GQEA +E A I+D I L +Y
Sbjct: 1028 ILMDGLSILSNDVSDKDIVYSLLLVLSGILTDKNGKTIGQEAVIECAHIIIDHSIILISY 1087
Query: 351 SHIM 362
H+M
Sbjct: 1088 PHMM 1091
>ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
gi|550342418|gb|ERP63247.1| hypothetical protein
POPTR_0003s04720g [Populus trichocarpa]
Length = 913
Score = 108 bits (271), Expect(2) = 2e-43
Identities = 59/120 (49%), Positives = 72/120 (60%)
Frame = +3
Query: 3 AIIRPLYKQRFFSTIMPIFXXXXXXXXXXXXXXMLYRAFAHVLSDTPTTXXXXXXXXXXX 182
AIIRPLYKQRFFSTIMPI MLYRAFA+V+ TP
Sbjct: 737 AIIRPLYKQRFFSTIMPILQSLIIQSDSLLSRSMLYRAFANVVIGTPLIVILNDAKKLIP 796
Query: 183 XXXDCLSMLSKDVMNKKIIYNVLLVISGILLEKNGQEAAVENAPSIVDQLIELTAYSHIM 362
D L +LSKDV++K I+Y++LLV+SGIL +KNGQE +ENA I++ LI Y H M
Sbjct: 797 MVLDSLKLLSKDVLDKDIMYSLLLVLSGILTDKNGQEGVIENAHIIINYLIGFVTYPHTM 856
Score = 95.1 bits (235), Expect(2) = 2e-43
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +1
Query: 391 VRETAIQCLVAVSELPHARIYPLRTKVLRATSKALDDPKRIVRQEAVRCRQAWASI 558
VRET IQCLVA+SELPH RIYP+R +VL+A SKALDDPKR VRQEAVRCRQAW+ I
Sbjct: 858 VRETTIQCLVAMSELPHTRIYPMRIQVLQAVSKALDDPKRAVRQEAVRCRQAWSVI 913