BLASTX nr result
ID: Rehmannia24_contig00018613
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00018613
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS71218.1| hypothetical protein M569_03539 [Genlisea aurea] 93 4e-17
ref|XP_006484517.1| PREDICTED: putative pentatricopeptide repeat... 70 4e-10
ref|XP_006437612.1| hypothetical protein CICLE_v10030697mg [Citr... 70 4e-10
ref|XP_004298038.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
ref|XP_006286449.1| hypothetical protein CARUB_v10000227mg [Caps... 64 3e-08
gb|EMJ04464.1| hypothetical protein PRUPE_ppa019788mg, partial [... 64 3e-08
ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp.... 64 3e-08
ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat... 64 3e-08
emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera] 64 3e-08
ref|XP_006399321.1| hypothetical protein EUTSA_v10015588mg [Eutr... 63 5e-08
ref|XP_002307160.2| hypothetical protein POPTR_0005s09280g [Popu... 62 8e-08
ref|NP_196448.2| pentatricopeptide repeat-containing protein [Ar... 62 8e-08
emb|CAC08331.1| putative protein [Arabidopsis thaliana] 62 8e-08
gb|EOX99093.1| Tetratricopeptide repeat (TPR)-like superfamily p... 61 1e-07
gb|EXB65806.1| hypothetical protein L484_004765 [Morus notabilis] 57 3e-06
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat... 57 3e-06
ref|XP_006359301.1| PREDICTED: putative pentatricopeptide repeat... 56 6e-06
ref|XP_004497230.1| PREDICTED: uncharacterized protein LOC101514... 56 6e-06
ref|XP_004237169.1| PREDICTED: putative pentatricopeptide repeat... 55 7e-06
>gb|EPS71218.1| hypothetical protein M569_03539 [Genlisea aurea]
Length = 796
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/69 (69%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +2
Query: 278 IQRKPICS-NAETSTVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRL 454
++R+ CS N T TVEASLIS+FTKRPF ESP LQELS +LTPQVVETVLK +WRL
Sbjct: 36 LERRRFCSDNDSTRTVEASLISIFTKRPFSPESPVLQELSLRLTPQVVETVLKSLNSWRL 95
Query: 455 AQVFFDWAS 481
A FFDWAS
Sbjct: 96 ALSFFDWAS 104
>ref|XP_006484517.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Citrus sinensis]
Length = 845
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Frame = +2
Query: 287 KPICSNAETSTVEAS--------LISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFR 442
+PICSN++ + S +IS+F K+PF +PEL +LS KLT +VVE VL FR
Sbjct: 29 RPICSNSQNNNTLPSDAFEITDKIISIFAKKPFSPNNPELIDLSPKLTNKVVENVLNKFR 88
Query: 443 NWRLAQVFFDWASDQ 487
+W+LA FF WAS Q
Sbjct: 89 SWKLANFFFAWASVQ 103
>ref|XP_006437612.1| hypothetical protein CICLE_v10030697mg [Citrus clementina]
gi|557539808|gb|ESR50852.1| hypothetical protein
CICLE_v10030697mg [Citrus clementina]
Length = 845
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Frame = +2
Query: 287 KPICSNAETSTVEAS--------LISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFR 442
+PICSN++ + S +IS+F K+PF +PEL +LS KLT +VVE VL FR
Sbjct: 29 RPICSNSQNNNTLPSDAFEITDKIISIFAKKPFSPNNPELIDLSPKLTNKVVENVLNKFR 88
Query: 443 NWRLAQVFFDWASDQ 487
+W+LA FF WAS Q
Sbjct: 89 SWKLANFFFAWASVQ 103
>ref|XP_004298038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 779
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = +2
Query: 290 PICSNAETSTVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFF 469
P N + V LIS+FT +PF ++P L+ +S++TP+ VE VL ++W++A +FF
Sbjct: 49 PFLPNPDVGHVADGLISIFTNQPFSPDNPNLKHFASRITPKAVECVLNGLKSWKVAHLFF 108
Query: 470 DWASDQ 487
WAS+Q
Sbjct: 109 TWASNQ 114
>ref|XP_006286449.1| hypothetical protein CARUB_v10000227mg [Capsella rubella]
gi|482555155|gb|EOA19347.1| hypothetical protein
CARUB_v10000227mg [Capsella rubella]
Length = 830
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +2
Query: 314 STVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQE 490
S + +LI++FT++PF + PEL LS +L +VVETVL FR W LA FF+WAS+Q+
Sbjct: 40 SKLAQNLIAIFTRQPFSPDDPELLRLSPELNTKVVETVLNGFRRWGLAYQFFNWASNQK 98
>gb|EMJ04464.1| hypothetical protein PRUPE_ppa019788mg, partial [Prunus persica]
Length = 778
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Frame = +2
Query: 287 KPICSNAETST--------VEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFR 442
+PIC+ T V IS+FT++PF ++PEL+ L+S+LT +VVE+VL +
Sbjct: 42 RPICTRTHTGPSLPSHLTGVINGFISIFTEQPFSPDNPELKNLASRLTTKVVESVLDGLK 101
Query: 443 NWRLAQVFFDWASDQ 487
+W++A VFF WA Q
Sbjct: 102 SWKIAHVFFTWAPTQ 116
>ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/59 (49%), Positives = 43/59 (72%)
Frame = +2
Query: 314 STVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQE 490
S + +LI++FT++PF + PEL +L+ +L +VVETVL F+ W LA +FF+WAS QE
Sbjct: 42 SKLAQNLIAIFTRQPFSPDDPELLKLAPELNTKVVETVLNEFKRWGLAYLFFNWASKQE 100
>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product
[Vitis vinifera]
Length = 854
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +2
Query: 200 ILLFISTNQSFITSTVCMSITCRIRLIQRKPICS--NAETSTVEASLISVFTKRPFCLES 373
I LF T +S T + + + +RLI K S + + + +LIS+FTK+PF ++
Sbjct: 25 IQLFFYTQKSLFTQNLS-TFSQFLRLICTKSSASFSSPHGAHITNALISIFTKQPFNPDN 83
Query: 374 PELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQ 487
EL+ S LT +VVE VL ++W++A FF+WASDQ
Sbjct: 84 QELRNFGSMLTHEVVENVLSGLKSWKIAYRFFNWASDQ 121
>emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +2
Query: 200 ILLFISTNQSFITSTVCMSITCRIRLIQRKPICS--NAETSTVEASLISVFTKRPFCLES 373
I LF T +S T + + + +RLI K S + + + +LIS+FTK+PF ++
Sbjct: 25 IQLFFYTQKSLFTQNLS-TFSQFLRLICTKSSASFSSPHGAHITNALISIFTKQPFNPDN 83
Query: 374 PELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQ 487
EL+ S LT +VVE VL ++W++A FF+WASDQ
Sbjct: 84 QELRNFGSMLTHEVVENVLSGLKSWKIAYRFFNWASDQ 121
>ref|XP_006399321.1| hypothetical protein EUTSA_v10015588mg [Eutrema salsugineum]
gi|557100411|gb|ESQ40774.1| hypothetical protein
EUTSA_v10015588mg [Eutrema salsugineum]
Length = 829
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +2
Query: 314 STVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQE 490
S + +LI++FT++PF + PEL L+ +L +VVETVL F+ W LA +FF+WAS QE
Sbjct: 39 SKLAQNLIAIFTRQPFSPDDPELLRLAPELNTKVVETVLNGFKRWGLAYLFFNWASRQE 97
>ref|XP_002307160.2| hypothetical protein POPTR_0005s09280g [Populus trichocarpa]
gi|550338460|gb|EEE94156.2| hypothetical protein
POPTR_0005s09280g [Populus trichocarpa]
Length = 835
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 308 ETSTVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQ 487
++ + LIS+FTK+PF +PEL+ L+ L +VVETVL +NW++A FF WAS+Q
Sbjct: 37 DSRNITNDLISIFTKQPFSPNNPELESLAPLLNTKVVETVLNGLKNWKIALHFFTWASNQ 96
>ref|NP_196448.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635617|sp|P0C8Q6.1|PP368_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g08310, mitochondrial; Flags: Precursor
gi|332003898|gb|AED91281.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 832
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +2
Query: 314 STVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQE 490
S + +LI +FT++PF + PEL LS +L +VVETVL F+ W LA +FF+WAS QE
Sbjct: 42 SKLAQNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLNGFKRWGLAYLFFNWASKQE 100
>emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +2
Query: 314 STVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQE 490
S + +LI +FT++PF + PEL LS +L +VVETVL F+ W LA +FF+WAS QE
Sbjct: 42 SKLAQNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLNGFKRWGLAYLFFNWASKQE 100
>gb|EOX99093.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 850
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Frame = +2
Query: 281 QRKPICS--------NAETSTVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKF 436
Q++PIC+ +++ + + IS+ K+PF +PELQ L LT +VVE V+
Sbjct: 41 QQRPICTKHQNDNFLSSDQINISNAFISILIKQPFSPNNPELQNLVPLLTHKVVEAVVNN 100
Query: 437 FRNWRLAQVFFDWASDQ 487
R+WR+A +FF WAS+Q
Sbjct: 101 LRSWRIAHLFFTWASNQ 117
>gb|EXB65806.1| hypothetical protein L484_004765 [Morus notabilis]
Length = 820
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +2
Query: 302 NAETSTVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWAS 481
++E + V LIS+FTK+PF ++PEL++ + LT ++VE VL ++W+ A FF WAS
Sbjct: 44 SSEQTQVGYDLISIFTKQPFPPDNPELKKFAPILTTKLVELVLNGLKSWKTAFSFFTWAS 103
Query: 482 DQ 487
+Q
Sbjct: 104 NQ 105
>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g08310,
mitochondrial-like [Cucumis sativus]
Length = 849
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = +2
Query: 320 VEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWASDQ 487
+ + IS+F+++ F L+ P+L+ L+ L P++VETVL +W++A +FF WAS Q
Sbjct: 60 ISNNFISLFSQQKFSLDDPQLKNLAPSLNPRIVETVLNGLGSWKIAHMFFTWASKQ 115
>ref|XP_006359301.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565387018|ref|XP_006359302.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like isoform X2 [Solanum
tuberosum] gi|565387020|ref|XP_006359303.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like isoform X3 [Solanum
tuberosum]
Length = 852
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +2
Query: 302 NAETSTVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWRLAQVFFDWAS 481
+++ S + L+ +FTK +S EL EL S +T +VE VL+ RNWR+A +FF+WAS
Sbjct: 61 SSDDSRIADRLVHIFTKPRDSSKSQELDELGSNITTFIVEFVLRKLRNWRIAHLFFNWAS 120
Query: 482 D 484
+
Sbjct: 121 N 121
>ref|XP_004497230.1| PREDICTED: uncharacterized protein LOC101514261 [Cicer arietinum]
Length = 1625
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/79 (35%), Positives = 50/79 (63%)
Frame = +2
Query: 254 SITCRIRLIQRKPICSNAETSTVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLK 433
S+T ++R ++ +S+ +L+S+FT + +PEL+ ++ +LTP +VE+VL
Sbjct: 8 SVTTKLRYF-------SSSSSSAADALVSIFTTKG--TSAPELKTIAPELTPNLVESVLT 58
Query: 434 FFRNWRLAQVFFDWASDQE 490
+WR+AQ FF WAS+Q+
Sbjct: 59 RLHSWRVAQTFFHWASNQQ 77
>ref|XP_004237169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Solanum lycopersicum]
Length = 852
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +2
Query: 284 RKPICS----NAETSTVEASLISVFTKRPFCLESPELQELSSKLTPQVVETVLKFFRNWR 451
+KPI S + + S + L+ +FTK +S EL EL SK+T +VE VL+ R+WR
Sbjct: 51 QKPINSPPPISIDDSRIVDRLVHIFTKPLDSSKSQELDELGSKITTCIVEFVLRKLRSWR 110
Query: 452 LAQVFFDWASD 484
+A +FF+WAS+
Sbjct: 111 IAHLFFNWASN 121