BLASTX nr result

ID: Rehmannia24_contig00018590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018590
         (575 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349305.1| PREDICTED: DNA-directed RNA polymerase III s...    59   1e-06
ref|XP_004242397.1| PREDICTED: uncharacterized protein LOC101246...    57   3e-06

>ref|XP_006349305.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC7-like
           [Solanum tuberosum]
          Length = 201

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 31/75 (41%), Positives = 43/75 (57%)
 Frame = +2

Query: 2   SSSPYYYIDRRQRPEKEQKPDIERYSDRKLQATKARSSSLFDFIVLDPDHIPAELARGXX 181
           +SSPYY  +     +K +  DIER+SDR L+  K++   L   I +D  H+PAELA+G  
Sbjct: 53  NSSPYYLAEESDVLKKTKGMDIERFSDRSLERDKSKPP-LTHSIRMDSAHVPAELAKGGT 111

Query: 182 XXXXXXXXIRWNPES 226
                   +RWNPES
Sbjct: 112 EDRHAAKRVRWNPES 126


>ref|XP_004242397.1| PREDICTED: uncharacterized protein LOC101246067 [Solanum
           lycopersicum]
          Length = 204

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +2

Query: 2   SSSPYYYIDRRQRPEKEQKPDIERYSDRKLQATKARSSSLFDFIVLDPDHIPAELARGXX 181
           +SSPYY  D      K+ K DIER+SD+K +  KA+   L  FI ++PD++PAELA G  
Sbjct: 57  NSSPYYLADESD-VSKKTKMDIERFSDKKSERDKAKPP-LDKFIRMEPDYVPAELAEGGR 114

Query: 182 XXXXXXXXIRWNPE 223
                   +RW P+
Sbjct: 115 KRRDNTDGMRWTPD 128


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