BLASTX nr result
ID: Rehmannia24_contig00018585
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00018585
(421 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 106 4e-21
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 100 2e-19
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 99 6e-19
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 76 4e-12
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 74 3e-11
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 74 3e-11
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A... 72 8e-11
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 71 2e-10
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 70 3e-10
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 70 4e-10
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 69 5e-10
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 69 8e-10
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 69 8e-10
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 67 2e-09
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 67 3e-09
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A... 66 4e-09
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 66 5e-09
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 65 9e-09
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 65 9e-09
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A... 65 1e-08
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 106 bits (264), Expect = 4e-21
Identities = 48/102 (47%), Positives = 67/102 (65%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
K VAW C PK EGGLGL ++K WN ALL+ IL + H K +L RW+HHYY R
Sbjct: 213 KPLVAWPVVCSPKQEGGLGLFNLKDWNLALLSHILWDFHCKKDSLRVRWVHHYYFRRSDE 272
Query: 182 WDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWST 307
W++N+ +S+S LIK I++IRD +I S + +++I+ WST
Sbjct: 273 WNYNISSSNSVLIKKIIQIRDFIISKELSMEETKKRIQSWST 314
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 100 bits (250), Expect = 2e-19
Identities = 54/140 (38%), Positives = 76/140 (54%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
K VAW C PK EGGLGL ++K WN ALL+ IL ++H+ K +LW R +HHYY + ++
Sbjct: 168 KPLVAWSEVCTPKKEGGLGLFNLKDWNIALLSCILWDLHSKKDSLWVRLVHHYYFKGGNV 227
Query: 182 WDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSKCTRDAYETFRPHG 361
WD+ +SDS I IRD +I + + A+ + W + + Y+ R
Sbjct: 228 WDFISSSSDSVFI----HIRDIIISKEENIEVAKLMLNSWGCNEQTLAGK-MYDYIRGTR 282
Query: 362 NNVCWKSVIWGPSTPPKHSF 421
V W S+IW P P K SF
Sbjct: 283 PVVHWSSIIWNPVIPSKMSF 302
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/102 (46%), Positives = 65/102 (63%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
K VAW C PK EGGLGL ++K WN ALL+ IL + H K +L W+HHYY R +
Sbjct: 180 KPLVAWSVVCSPKREGGLGLFNLKDWNLALLSCILWDFHCKKDSL---WVHHYYFRRSDV 236
Query: 182 WDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWST 307
W++N +S S LIK I++IRD +I S + A+++I+ W T
Sbjct: 237 WNYNTSSSYSVLIKKIIQIRDFIISKELSTEEAKKRIQSWRT 278
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 76.3 bits (186), Expect = 4e-12
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLR 169
K+ +AW C PK EGGLGL ++K WN LL++IL + H K LW RW+HHYY R
Sbjct: 180 KSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRILWDFHCKKDFLWVRWVHHYYFR 235
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/140 (29%), Positives = 71/140 (50%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
K+ VAWK C P+ GGL + DI WN A L K+L N+ + + +LW +WI YY++ +
Sbjct: 228 KSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSEL 287
Query: 182 WDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSKCTRDAYETFRPHG 361
+ +DS ++K IL+ R+ L + + E G ++ Y + G
Sbjct: 288 MHIEMKNTDSWIMKAILKQREDL-------EKIDNMEELMIRGSIN--MGKLYRKLQDCG 338
Query: 362 NNVCWKSVIWGPSTPPKHSF 421
WK++++G + P+ +F
Sbjct: 339 QRKEWKNLLYGNTARPRANF 358
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
KA VAW T PK GG + ++K WN A + K+L I + LW RWIH YY++ + I
Sbjct: 842 KAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDI 901
Query: 182 WDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSK--CTRDAYETFRP 355
N+ + +++ I++ RD L I W + + AY+
Sbjct: 902 LTVNISNQTTWILRKIVKARDHL-----------SNIGDWDEICIGDKFSMKKAYKKISE 950
Query: 356 HGNNVCWKSVIWGPSTPPKHSF 421
+G V W+ +I PK F
Sbjct: 951 NGERVRWRRLICNNYATPKSKF 972
>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 342
Score = 72.0 bits (175), Expect = 8e-11
Identities = 52/190 (27%), Positives = 71/190 (37%), Gaps = 51/190 (26%)
Frame = +2
Query: 5 ACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIW 184
A V W CLP EGGL +RD SWN A KIL + +LW W+ Y L+ RS+W
Sbjct: 26 AKVGWDEVCLPFDEGGLNIRDGSSWNIASTLKILWLLLVKSGSLWVSWVESYILKGRSLW 85
Query: 185 D-----------------------------------------WNVHTSD----------S 211
+ W+V D S
Sbjct: 86 EIDAGMEVGNGRKCRVWLVPWIQGGPIIQQFGERVIYDAGSRWDVRLVDFMGRNGDWRWS 145
Query: 212 PLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSKCTRDAYETFRPHGNNVCWKSVIW 391
+ +++ I DR + S E + + S A+ET RPH + V W ++W
Sbjct: 146 LVSLDLMDIWDR-VQGVRPSPSVEDRWVWVPGSRDSFSITSAWETIRPHSSRVGWSGLLW 204
Query: 392 GPSTPPKHSF 421
G PKHSF
Sbjct: 205 GGGNIPKHSF 214
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
KA ++W C PK EGGLGLR++K N K++ I +N +LW +W+ Y +R +SI
Sbjct: 504 KAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSI 563
Query: 182 WDWNVHTS-DSPLIKNILRIRDRLID----TCGSQQSAEQKIEYWS 304
W TS S + + IL+IRD G+ +SA ++WS
Sbjct: 564 WSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWS 609
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 70.1 bits (170), Expect = 3e-10
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
K+ +AW+ C PK GGL + ++ WN + K+L N+ LW +W+H YY+R +SI
Sbjct: 670 KSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSI 729
Query: 182 WDWNVHTSDSPLIKNILRIRDRLI 253
W + S S ++ +++++R L+
Sbjct: 730 WSMVLKKSHSWIMSSMMKLRPLLL 753
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
KA +AW C PK EGGLGLR +K N K++ I ++ +LW +WIH L+ S
Sbjct: 239 KAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSF 298
Query: 182 WDWNVHTS-DSPLIKNILRIRDRLIDTCGSQQSAEQKIEYW 301
W +TS S + K +L+ RD I C ++ + +W
Sbjct: 299 WAVRENTSLGSWMWKKVLKFRDAAIQLCKAEVNNGAHTFFW 339
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
K+ +AW + C PK +GGL + ++K WNH + L N+ LW +WIH +Y++N S+
Sbjct: 670 KSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHAHYIKNSSV 729
Query: 182 WDWNVHTSDSPLIKNILRIRD 244
+ V + S ++KN+L R+
Sbjct: 730 MNTMVTNNFSWVLKNVLSQRE 750
>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
sativus]
Length = 382
Score = 68.6 bits (166), Expect = 8e-10
Identities = 58/204 (28%), Positives = 74/204 (36%), Gaps = 65/204 (31%)
Frame = +2
Query: 5 ACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIW 184
A VAW CLP EGGL +RD SWN A KIL + +LW W+ Y L+ RS+
Sbjct: 125 AKVAWDEVCLPFDEGGLAIRDGSSWNIASTLKILWLLLVKSGSLWVAWVEAYILKGRSML 184
Query: 185 DW------NVHTSDSPLIKNILRIR----------------------DRLIDTCGSQQSA 280
W + IK ILR R +R+I GS++ A
Sbjct: 185 GWVDLGVLGLSCVSGISIKLILRWRWAMAGSLECGWIQGGTIIQQFGERVIYDAGSRRDA 244
Query: 281 ---------------------------------EQKIE---YWSTGLL-SKCTRDAYETF 349
+E W G L S A+ET
Sbjct: 245 RLVDFMVRDGDWRWPLVSLDLMDIWDWIQGVRPSSSVEDRWVWVPGSLDSFSIASAWETI 304
Query: 350 RPHGNNVCWKSVIWGPSTPPKHSF 421
RPH + V W ++W PKHSF
Sbjct: 305 RPHSSRVGWSGLLWDRGNIPKHSF 328
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
KA +AW+T C PK EGGLGL+ IK N K++ I + +LW +WI Y L+ +
Sbjct: 375 KAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTF 434
Query: 182 WDWNVHTSDSPLIKNILRIRD 244
W + + S + K +L+ RD
Sbjct: 435 WSFRSASQGSWMWKKLLKYRD 455
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 67.4 bits (163), Expect = 2e-09
Identities = 39/140 (27%), Positives = 66/140 (47%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
KA VAW PK GGL + ++ WN A + K+L I + LW RW++ YY++ ++I
Sbjct: 845 KAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNI 904
Query: 182 WDWNVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYWSTGLLSKCTRDAYETFRPHG 361
+ V ++ S +++ I R+ L T G + + ++ + Y+ +
Sbjct: 905 ENVTVSSNTSWILRKIFESRELLTRTGGWEAVSNH---------MNFSIKKTYKLLQEDY 955
Query: 362 NNVCWKSVIWGPSTPPKHSF 421
NV WK +I PK F
Sbjct: 956 ENVVWKRLICNNKATPKSQF 975
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 66.6 bits (161), Expect = 3e-09
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +2
Query: 2 KACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSI 181
KA +AW C PK+EGGLGL ++K WN + + K+ ++ + LW +WIH YY++ +
Sbjct: 650 KALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIKGQRE 709
Query: 182 W 184
W
Sbjct: 710 W 710
>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 265
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/97 (37%), Positives = 48/97 (49%)
Frame = +2
Query: 11 VAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIWDW 190
VAW CLP EGGL +RD SWN A KIL + +LW W+ Y L+ RS+W+
Sbjct: 130 VAWDEVCLPFDEGGLVIRDRSSWNIASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEI 189
Query: 191 NVHTSDSPLIKNILRIRDRLIDTCGSQQSAEQKIEYW 301
+V S + ILR R+ L + +K W
Sbjct: 190 DVGVGRSWCFRAILRKREILEAHVNIEVGNGKKCRVW 226
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 65.9 bits (159), Expect = 5e-09
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Frame = +2
Query: 11 VAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIWDW 190
VAW CLPK EGGLG++D+ WN AL+ + N+ ++ W W+ Y L+ S W+
Sbjct: 682 VAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNA 741
Query: 191 NVHTSDSPLIKNILRIRDR----LIDTCGSQQSAEQKIE----------YWSTGLLSK-- 322
+ + S + +L+IR+ ++ G ++ + WS+ ++ +
Sbjct: 742 PLPSICSWNWRKLLKIRELCCSFFVNIIGDGRATSLWFDNWHPLGPLTLRWSSNIIGESG 801
Query: 323 -------------CTRDAYETFRPHGNNVCWKSVIWGPSTPPKHSF 421
T A+ T RP V W ++W + H F
Sbjct: 802 LSKSAMLTPNGFYSTSSAWNTLRPSRFIVPWYRLVWFVAETHNHLF 847
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +2
Query: 11 VAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIWDW 190
V+W CCLPK EGGLG R WN LL +++ + +LW +W H+ L + S W
Sbjct: 713 VSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQV 772
Query: 191 NVHTSDSPLIKNILRIR 241
N +D K +L +R
Sbjct: 773 NALQTDPWTWKMLLNLR 789
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +2
Query: 11 VAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIWDW 190
V+W CCLPK EGGLG R WN LL +++ + +LW +W H+ L + S W
Sbjct: 713 VSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQV 772
Query: 191 NVHTSDSPLIKNILRIR 241
N +D K +L +R
Sbjct: 773 NALQTDPWTWKMLLNLR 789
>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Cucumis sativus]
Length = 647
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/82 (41%), Positives = 43/82 (52%)
Frame = +2
Query: 5 ACVAWKTCCLPKHEGGLGLRDIKSWNHALLAKILRNIHANKQTLWYRWIHHYYLRNRSIW 184
A VAW CLP EGGL + D SWN A KIL + +LW W+ Y L+ RS+W
Sbjct: 310 AKVAWDEVCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRSLW 369
Query: 185 DWNVHTSDSPLIKNILRIRDRL 250
+ + S + ILR RD L
Sbjct: 370 EIDAGAGRSWCFRAILRKRDIL 391