BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018582
         (369 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350509.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containi...   148   8e-34
gb|EXC21407.1| hypothetical protein L484_011849 [Morus notabilis]     146   3e-33
ref|XP_006491968.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_002515645.1| pentatricopeptide repeat-containing protein,...   130   2e-28
gb|EOY23620.1| Tetratricopeptide repeat-like superfamily protein...   127   2e-27
ref|XP_002317794.2| hypothetical protein POPTR_0012s02580g [Popu...   126   3e-27
gb|ESW31570.1| hypothetical protein PHAVU_002G249000g [Phaseolus...   115   6e-24
ref|XP_006596915.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_006596257.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_003588473.1| Pentatricopeptide repeat-containing protein ...    93   4e-17
ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Caps...    83   3e-14
ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Caps...    83   3e-14
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygr...    80   2e-13
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_006371982.1| hypothetical protein POPTR_0018s06910g [Popu...    78   1e-12
ref|XP_002330519.1| predicted protein [Populus trichocarpa]            78   1e-12
ref|XP_002533488.1| pentatricopeptide repeat-containing protein,...    78   1e-12
ref|XP_001785902.1| predicted protein [Physcomitrella patens] gi...    78   1e-12

>ref|XP_006350509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Solanum tuberosum]
          Length = 851

 Score =  152 bits (384), Expect = 4e-35
 Identities = 69/104 (66%), Positives = 83/104 (79%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDK 135
           ++S+ YASVLDSC CP  GKQVHA  LKNGFHG EFV+TKLLQ+YGKCGC DD V +FDK
Sbjct: 62  LSSSSYASVLDSCKCPNLGKQVHAQALKNGFHGHEFVETKLLQMYGKCGCFDDAVQLFDK 121

Query: 134 MPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIGLEFFVF 3
           M +RNLY++TA+LNV L NGLFEEA   F ++  E+  LEFF+F
Sbjct: 122 MRERNLYSWTAILNVYLSNGLFEEAFECFNQVRFEEFELEFFLF 165



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/80 (36%), Positives = 46/80 (57%)
 Frame = -2

Query: 266 KFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKMPDRNLYTYTAVLNVL 87
           + GKQ+H  ++K GF    +V   L+ +YGKCG LD+   V +KM  R+  ++ +V+   
Sbjct: 179 ELGKQLHGTVIKYGFASNVYVGNALIDMYGKCGSLDNAKEVLNKMLKRDCVSWNSVITAF 238

Query: 86  LDNGLFEEALMYFERLLLED 27
             NG+  EAL  F ++  ED
Sbjct: 239 AANGMLTEALEVFNKMSAED 258


>ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 702

 Score =  148 bits (373), Expect = 8e-34
 Identities = 71/119 (59%), Positives = 91/119 (76%)
 Frame = -2

Query: 359 SVSQTETIVPFLSGKVNSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLY 180
           S +   T +  L  +++S+ YAS+L+SC     GKQVHAH LK GFHG EFV+TKLLQ+Y
Sbjct: 45  STAAHHTHLSLLDKQIDSSTYASLLESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMY 104

Query: 179 GKCGCLDDLVMVFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIGLEFFVF 3
           G+ GCLDD  +VF KMP RNLY++TA+L+V +D+G FEEAL  FE+L L+DIGLEFFVF
Sbjct: 105 GRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVF 163


>gb|EXC21407.1| hypothetical protein L484_011849 [Morus notabilis]
          Length = 841

 Score =  146 bits (368), Expect = 3e-33
 Identities = 67/104 (64%), Positives = 83/104 (79%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDK 135
           VNS+ YAS+ +SC CP  GKQVHAH +K GF G EFV+TKLLQ+Y KCG L+D  +VF+K
Sbjct: 45  VNSSSYASIFESCRCPDLGKQVHAHTVKTGFCGHEFVETKLLQMYAKCGRLEDAALVFEK 104

Query: 134 MPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIGLEFFVF 3
           MP RNLY +TA+L+V +D GL+EEAL +F  L LED+GLEFFVF
Sbjct: 105 MPLRNLYAWTAILSVYVDCGLYEEALFHFMELQLEDVGLEFFVF 148



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -2

Query: 290 VLDSCS---CPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKMPDRN 120
           +L +CS     + GKQVHAH ++ G+    ++   L+ +Y KCG L    + ++++ D N
Sbjct: 564 ILPACSRLAATERGKQVHAHSIRCGYDKDVYIGAALVDMYAKCGSLKHAFLAYNRISDPN 623

Query: 119 LYTYTAVLNVLLDNGLFEEALMYFERLL 36
           L +Y A+L     +G  EE + +F ++L
Sbjct: 624 LVSYNAMLTAYAMHGHGEEGIAFFRKML 651



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/74 (31%), Positives = 45/74 (60%)
 Frame = -2

Query: 266 KFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKMPDRNLYTYTAVLNVL 87
           + G+Q+H  ++K+ F    +V   L+ +YGKCG L+D   V +KMP+++  ++ +++   
Sbjct: 162 ELGRQLHGIVVKSRFITNLYVGNALIDMYGKCGSLEDAKKVLEKMPEKDCVSWNSIVTAC 221

Query: 86  LDNGLFEEALMYFE 45
             NG+  EAL + +
Sbjct: 222 AANGMVYEALDFLD 235


>ref|XP_006491968.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Citrus sinensis]
          Length = 817

 Score =  143 bits (361), Expect = 2e-32
 Identities = 66/121 (54%), Positives = 85/121 (70%)
 Frame = -2

Query: 365 NQSVSQTETIVPFLSGKVNSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQ 186
           N S+      V  L    NS  YAS+L+SC CP  GKQVHAH +K GF G EFV+TKLLQ
Sbjct: 2   NISIPSNHAHVSLLDKPANSITYASILESCKCPNLGKQVHAHSIKTGFRGHEFVETKLLQ 61

Query: 185 LYGKCGCLDDLVMVFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIGLEFFV 6
           +YG+ GCL+D  ++FDKMP RNLY+YTA+L++ +D G + +A   F+ LL EDI L+FFV
Sbjct: 62  MYGRYGCLEDASLIFDKMPRRNLYSYTAILSLYMDLGFYRKAFSRFQELLREDICLKFFV 121

Query: 5   F 3
           F
Sbjct: 122 F 122



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = -2

Query: 290 VLDSCS---CPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKMPDRN 120
           VL  CS     + G+Q+H  + K  F    +V   L+ +YGKCG LDD   VF  MP+R+
Sbjct: 125 VLKICSGFAAVELGRQLHGIVTKYQFDSNVYVGNSLIDMYGKCGSLDDAKKVFKMMPERD 184

Query: 119 LYTYTAVLNVLLDNGLFEEALMYFERL 39
             ++ +V+     NGL  EAL   ER+
Sbjct: 185 CVSWNSVVTACAANGLVLEALECLERM 211


>ref|XP_002515645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545188|gb|EEF46697.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 758

 Score =  130 bits (327), Expect = 2e-28
 Identities = 61/104 (58%), Positives = 77/104 (74%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDK 135
           +NST YASVLDSC+    G QVHAH +K GFH  +FVQTKLLQ+Y K GCL+   ++FD 
Sbjct: 65  INSTGYASVLDSCNSQNLGTQVHAHAIKTGFHCHDFVQTKLLQMYAKFGCLECAHLLFDS 124

Query: 134 MPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIGLEFFVF 3
           +P RNL+++ A+LNV  D+GLF+EA   F+ LL EDI LEFF F
Sbjct: 125 VPLRNLHSWLAILNVYFDHGLFDEAFSLFQELLFEDIELEFFAF 168


>gb|EOY23620.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 831

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/117 (52%), Positives = 82/117 (70%)
 Frame = -2

Query: 353 SQTETIVPFLSGKVNSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGK 174
           S     +  L   ++ST YAS+L++C+ P  GKQVHAH LK GF   EFV TKLLQ+Y K
Sbjct: 28  SHMPNTLSLLDKPISSTAYASILEACNDPSLGKQVHAHTLKTGFFAHEFVDTKLLQMYAK 87

Query: 173 CGCLDDLVMVFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIGLEFFVF 3
            G L+D  ++FDKM  RNLY++TA+L + +D GLFEEA   FE+L LE++ L+FFVF
Sbjct: 88  FGSLEDADLLFDKMALRNLYSWTAMLRLYVDYGLFEEAFRLFEKLQLEELLLDFFVF 144



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/74 (37%), Positives = 44/74 (59%)
 Frame = -2

Query: 260 GKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKMPDRNLYTYTAVLNVLLD 81
           G+Q+H  L+K  F    +V   L+ +YGKCG LDD   V + +P+++  ++ AV+     
Sbjct: 160 GRQLHGILIKYQFVLNVYVGNALIDMYGKCGSLDDAKKVLETIPEKDRVSWNAVVTACAT 219

Query: 80  NGLFEEALMYFERL 39
           NG   EAL +FER+
Sbjct: 220 NGKVYEALGFFERM 233


>ref|XP_002317794.2| hypothetical protein POPTR_0012s02580g [Populus trichocarpa]
           gi|550326228|gb|EEE96014.2| hypothetical protein
           POPTR_0012s02580g [Populus trichocarpa]
          Length = 807

 Score =  126 bits (316), Expect = 3e-27
 Identities = 57/104 (54%), Positives = 77/104 (74%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDK 135
           +N++ YASVLDSC CPK GKQVHAH +K GF    F+ TKLLQ+Y +CG L D   +F+ 
Sbjct: 60  LNTSKYASVLDSCKCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFET 119

Query: 134 MPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIGLEFFVF 3
           MP RNL+++ A+L+V LD+GLFEEA + F+ L  + + L+FFVF
Sbjct: 120 MPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVF 163



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -2

Query: 266 KFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKMPDRNLYTYTAVLNVL 87
           + G+Q+H  ++K  F    +V   L+ +YGKCG LDD   V  KMP+R+  T+ +V+   
Sbjct: 177 ELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITAC 236

Query: 86  LDNGLFEEALMYFERL 39
             NG+  EAL + E++
Sbjct: 237 AANGMVYEALEFLEKM 252


>gb|ESW31570.1| hypothetical protein PHAVU_002G249000g [Phaseolus vulgaris]
          Length = 810

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/103 (53%), Positives = 74/103 (71%)
 Frame = -2

Query: 311 NSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKM 132
           +ST YAS+LD+C    FGKQ+HAH +K+GF   EFV TKLLQ+Y +     +   +FD M
Sbjct: 48  SSTTYASILDTCGSLTFGKQLHAHSIKSGFQAHEFVTTKLLQMYARLCSFQNACHLFDTM 107

Query: 131 PDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIGLEFFVF 3
           P RNL+++ A+L V ++ G FEEAL+ FE+LL E +GLEFFVF
Sbjct: 108 PFRNLHSWAALLRVHVEMGFFEEALLLFEQLLYEAVGLEFFVF 150



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/83 (32%), Positives = 45/83 (54%)
 Frame = -2

Query: 266 KFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKMPDRNLYTYTAVLNVL 87
           + G+Q+H   LK  F    +V   L+ +YGKCG LD+   V + MP ++  ++ A++   
Sbjct: 164 ELGRQMHGMALKYEFVKNIYVGNALIDMYGKCGSLDEAKKVLEGMPQKDCVSWNALITAR 223

Query: 86  LDNGLFEEALMYFERLLLEDIGL 18
           + NGL  EAL   + +   + GL
Sbjct: 224 VANGLVYEALDLLQNMTAGECGL 246


>ref|XP_006596915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like, partial [Glycine max]
          Length = 764

 Score =  110 bits (275), Expect = 2e-22
 Identities = 55/105 (52%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
 Frame = -2

Query: 311 NSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKM 132
           +ST YAS+LDSC  P  GKQ+HAH +K+GF+  EFV TKLLQ+Y +    ++   VFD M
Sbjct: 50  SSTTYASILDSCGSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTM 109

Query: 131 PDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLED--IGLEFFVF 3
           P RNL+++TA+L V ++ G FEEA   FE+LL E   + L+FFVF
Sbjct: 110 PLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVF 154


>ref|XP_006596257.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 845

 Score =  110 bits (275), Expect = 2e-22
 Identities = 55/105 (52%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
 Frame = -2

Query: 311 NSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKM 132
           +ST YAS+LDSC  P  GKQ+HAH +K+GF+  EFV TKLLQ+Y +    ++   VFD M
Sbjct: 50  SSTTYASILDSCGSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTM 109

Query: 131 PDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLED--IGLEFFVF 3
           P RNL+++TA+L V ++ G FEEA   FE+LL E   + L+FFVF
Sbjct: 110 PLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVF 154


>ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477521|gb|AES58724.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 827

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDK 135
           + ST Y+++L S +    GKQ+H+H +K GF+   FVQTKLLQ+Y      +D   +FDK
Sbjct: 32  LTSTTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDK 91

Query: 134 MPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIG--LEFFVF 3
           M  +NL+++TAVL + L+ GLF +  M FE  L + +G  L+FFVF
Sbjct: 92  MTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVF 137



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/81 (33%), Positives = 48/81 (59%)
 Frame = -2

Query: 266 KFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMVFDKMPDRNLYTYTAVLNVL 87
           + G+QVH  +LK+GF    +V   L+ +YGKCG LD+   V + M  ++  ++ +++   
Sbjct: 151 ELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITAC 210

Query: 86  LDNGLFEEALMYFERLLLEDI 24
           + NG+  EAL   E +LL ++
Sbjct: 211 VANGVVYEALDLLENMLLSEL 231


>ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
           gi|482565817|gb|EOA30006.1| hypothetical protein
           CARUB_v10013108mg [Capsella rubella]
          Length = 691

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
 Frame = -2

Query: 326 LSGKVNSTDYASVLDSCSCPKFG----KQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLD 159
           LS   +S+ +A +LDSC   K      + VHA +LK+GF    F+Q +L+  YGKCG LD
Sbjct: 13  LSSLTDSSPFAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLD 72

Query: 158 DLVMVFDKMPDRNLYTYTAVLNVLLDNGLFEEA 60
           D   VFD+MP+RN+YT+ +VL  L   G  +EA
Sbjct: 73  DGRQVFDEMPERNVYTWNSVLTALTKLGFLDEA 105



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
 Frame = -2

Query: 299 YASVLDSCSCPK---FGKQVHAHLLKNGFH---GRE---FVQTKLLQLYGKCGCLDDLVM 147
           +A++L +C+       G Q H H+LK+GF    G E   FV   L+ +Y KCGC++D  +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKCGCVEDGYL 448

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLL 36
           VF KM +R+  ++ A++     NG   EAL  F  +L
Sbjct: 449 VFRKMMERDCVSWNAMIVGFAQNGYGNEALELFREML 485



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSC---PKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMV 144
           +N   +AS L +CS       G Q+H+ + K+      ++ + L+ +Y KCG +DD   V
Sbjct: 150 LNEYSFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGDVDDAQRV 209

Query: 143 FDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLL 36
           FD+M DRN+ ++ +++     NG   EAL  F+ +L
Sbjct: 210 FDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVML 245


>ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
           gi|482565816|gb|EOA30005.1| hypothetical protein
           CARUB_v10013108mg [Capsella rubella]
          Length = 690

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
 Frame = -2

Query: 326 LSGKVNSTDYASVLDSCSCPKFG----KQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLD 159
           LS   +S+ +A +LDSC   K      + VHA +LK+GF    F+Q +L+  YGKCG LD
Sbjct: 13  LSSLTDSSPFAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLD 72

Query: 158 DLVMVFDKMPDRNLYTYTAVLNVLLDNGLFEEA 60
           D   VFD+MP+RN+YT+ +VL  L   G  +EA
Sbjct: 73  DGRQVFDEMPERNVYTWNSVLTALTKLGFLDEA 105



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
 Frame = -2

Query: 299 YASVLDSCSCPK---FGKQVHAHLLKNGFH---GRE---FVQTKLLQLYGKCGCLDDLVM 147
           +A++L +C+       G Q H H+LK+GF    G E   FV   L+ +Y KCGC++D  +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKCGCVEDGYL 448

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLL 36
           VF KM +R+  ++ A++     NG   EAL  F  +L
Sbjct: 449 VFRKMMERDCVSWNAMIVGFAQNGYGNEALELFREML 485



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSC---PKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMV 144
           +N   +AS L +CS       G Q+H+ + K+      ++ + L+ +Y KCG +DD   V
Sbjct: 150 LNEYSFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGDVDDAQRV 209

Query: 143 FDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLL 36
           FD+M DRN+ ++ +++     NG   EAL  F+ +L
Sbjct: 210 FDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVML 245


>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cicer arietinum]
          Length = 706

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSCPKF---GKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMV 144
           ++S+ +A +LD C   K     ++VHA ++K  F    F+Q +L+ +YGKCGCL+D   V
Sbjct: 17  LDSSPFAKLLDCCVRSKSVFEARRVHARIIKTQFSSEIFIQNRLVDVYGKCGCLEDARKV 76

Query: 143 FDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFE 45
           FD MP+RN++++ AVL+ L   G  +EAL  F+
Sbjct: 77  FDHMPERNIFSWNAVLSALTKCGALDEALNVFK 109


>gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/100 (37%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
 Frame = -2

Query: 320 GKVNSTDYASVLDSCSCP---KFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLV 150
           G+ N   Y S+L +C CP   K+GK++HAH++++GF     V+T L+ +Y KCG ++D  
Sbjct: 215 GQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQ 274

Query: 149 MVFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLE 30
           ++FDKM +RN+ ++T ++  L   G  +EA   F ++  E
Sbjct: 275 LIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQRE 314



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = -2

Query: 344  ETIVPFLSGKVNSTDYASVLDSCSCP---KFGKQVHAHLLKNGFHGREFVQTKLLQLYGK 174
            E IVP      ++T Y S+L +C+     ++ K+VH H +  G      V   L+ +Y K
Sbjct: 719  EGIVP------DATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAK 772

Query: 173  CGCLDDLVMVFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLE 30
            CG +DD   VFD M +R+++++T ++  L  +G   EAL +F ++  E
Sbjct: 773  CGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSE 820



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
 Frame = -2

Query: 311 NSTDYASVLD-----SCSCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVM 147
           N T Y S+L+     S S  ++ K VH H  + GF     +   L+ +Y KCG +DD  +
Sbjct: 420 NLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARL 479

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDI 24
           VFD M DR++ ++ A++  L  NG   EA   F ++  E +
Sbjct: 480 VFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGL 520



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSCPK---FGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMV 144
           ++S  Y ++L  C   +     KQVH  ++K+G     +V  KLL++Y +CG L     V
Sbjct: 116 IDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQV 175

Query: 143 FDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLE 30
           FDK+  +N+Y +T ++    + G  E+A+  ++++  E
Sbjct: 176 FDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQE 213


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
 Frame = -2

Query: 314 VNSTDYASVLDSCSCPKFG---KQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMV 144
           ++S+ +A +LDSC   K G   +++HA ++K  F    F+Q +L+  YGKCG  +D   V
Sbjct: 17  LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76

Query: 143 FDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERL 39
           FD+MP RN ++Y AVL+VL   G  +EA   F+ +
Sbjct: 77  FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSM 111



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
 Frame = -2

Query: 299 YASVLDSCSCP---KFGKQVHAHLLKNGF---HGRE---FVQTKLLQLYGKCGCLDDLVM 147
           + ++L++C+     K G+Q H  +LK+GF    G E   FV   L+ +Y KCG ++D  +
Sbjct: 388 FGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCL 447

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLL 33
           VF++M +R++ ++ A++     NG    AL  F ++L+
Sbjct: 448 VFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLV 485


>ref|XP_006371982.1| hypothetical protein POPTR_0018s06910g [Populus trichocarpa]
           gi|550318228|gb|ERP49779.1| hypothetical protein
           POPTR_0018s06910g [Populus trichocarpa]
          Length = 872

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
 Frame = -2

Query: 317 KVNSTDYASVLDSCSC---PKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVM 147
           K N   + SVL SCS    P+FGKQVHAH++KN     +FV T L+ +Y K  CL+D  +
Sbjct: 396 KPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGV 455

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDI 24
            FD++ +R+++++T +++        E+A+ YF ++  E I
Sbjct: 456 AFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGI 496



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = -2

Query: 317 KVNSTDYASVLDSCS---CPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVM 147
           K N    AS L  CS     + G+Q+HA  +K G  G  FV + L+ LYGKCGC++    
Sbjct: 497 KPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEA 556

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDI 24
           +F  +  R++ ++  +++    +G  E+AL  F  +L E I
Sbjct: 557 IFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 597


>ref|XP_002330519.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
 Frame = -2

Query: 317 KVNSTDYASVLDSCSC---PKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVM 147
           K N   + SVL SCS    P+FGKQVHAH++KN     +FV T L+ +Y K  CL+D  +
Sbjct: 250 KPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGV 309

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDI 24
            FD++ +R+++++T +++        E+A+ YF ++  E I
Sbjct: 310 AFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGI 350



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = -2

Query: 317 KVNSTDYASVLDSCS---CPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVM 147
           K N    AS L  CS     + G+Q+HA  +K G  G  FV + L+ LYGKCGC++    
Sbjct: 351 KPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEA 410

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDI 24
           +F  +  R++ ++  +++    +G  E+AL  F  +L E I
Sbjct: 411 IFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 451


>ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526650|gb|EEF28892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 939

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
 Frame = -2

Query: 326 LSGKVNSTDYASVLDSCS---CPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDD 156
           +S K ++  YA VLD+C+       GKQ+H  ++K   H   ++ + L+ +Y KCG + D
Sbjct: 574 MSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQD 633

Query: 155 LVMVFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDI 24
             +VF+K P+++  T+ A++     +GL EEAL YFER+ LE++
Sbjct: 634 SALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENV 677



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = -2

Query: 314 VNSTDYASVLDSC---SCPKFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVMV 144
           V+ + YASV  SC   S  K G Q+HAH LK  F     V T  L +Y KCG L D   +
Sbjct: 275 VSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRI 334

Query: 143 FDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLEDIG 21
           F+ +P  +L  Y A++   + N    EAL +F+ LL   +G
Sbjct: 335 FNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLG 375


>ref|XP_001785902.1| predicted protein [Physcomitrella patens]
           gi|162662428|gb|EDQ49285.1| predicted protein
           [Physcomitrella patens]
          Length = 908

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
 Frame = -2

Query: 320 GKVNSTDYASVLDSCSCP---KFGKQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLV 150
           G+ N   Y S+L +C  P   K+GK++HAH++++GF     V+T L+ +Y KCG +DD  
Sbjct: 26  GQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQ 85

Query: 149 MVFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLE 30
           ++FDKM +RN+ ++T ++  L   G  +EA   F ++  E
Sbjct: 86  LIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQRE 125



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
 Frame = -2

Query: 311 NSTDYASVLDSCSCPKFG-----KQVHAHLLKNGFHGREFVQTKLLQLYGKCGCLDDLVM 147
           N T Y S+L++ +    G     K+VH H  K GF     V   L+ +Y KCG +DD  +
Sbjct: 231 NLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARL 290

Query: 146 VFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLE 30
           VFD M DR++ ++ A++  L  NG   EA   F ++  E
Sbjct: 291 VFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQE 329



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
 Frame = -2

Query: 344 ETIVPFLSGKVNSTDYASVLDSCSCP---KFGKQVHAHLLKNGFHGREFVQTKLLQLYGK 174
           E IVP      ++T Y S+L +C+     ++ K+VH+H +  G      V   L+ +Y K
Sbjct: 530 EGIVP------DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAK 583

Query: 173 CGCLDDLVMVFDKMPDRNLYTYTAVLNVLLDNGLFEEALMYFERLLLE 30
           CG +DD   VFD M +R++Y++T ++  L  +G   +AL  F ++ LE
Sbjct: 584 CGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLE 631