BLASTX nr result

ID: Rehmannia24_contig00018528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018528
         (360 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS61217.1| hypothetical protein M569_13581, partial [Genlise...    70   3e-10
ref|XP_006368936.1| hypothetical protein POPTR_0001s15040g [Popu...    62   1e-07
ref|XP_006368935.1| hypothetical protein POPTR_0001s15040g [Popu...    62   1e-07
ref|XP_002303239.2| hypothetical protein POPTR_0003s03170g, part...    60   4e-07
ref|XP_002326681.1| predicted protein [Populus trichocarpa]            60   4e-07
gb|EXC26778.1| DNA repair endonuclease UVH1 [Morus notabilis]          57   3e-06
gb|ESW28588.1| hypothetical protein PHAVU_002G001900g [Phaseolus...    56   4e-06
gb|ESW28587.1| hypothetical protein PHAVU_002G001900g [Phaseolus...    56   4e-06
gb|ESW28586.1| hypothetical protein PHAVU_002G001900g [Phaseolus...    56   4e-06
ref|XP_004511741.1| PREDICTED: DNA repair endonuclease UVH1-like...    56   6e-06
ref|XP_004511740.1| PREDICTED: DNA repair endonuclease UVH1-like...    56   6e-06
ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1,...    56   6e-06

>gb|EPS61217.1| hypothetical protein M569_13581, partial [Genlisea aurea]
          Length = 807

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
 Frame = +2

Query: 2   KQAKRGTDVKDGGANEEHXXXXXXXXXXXXTL--IGKTDPQSE-TSLQSETN---PSKNE 163
           K+ K+  +VKD    E H                IGK DP+ E T +QSET+   P  + 
Sbjct: 504 KRRKKTPEVKDDEPVERHDRGKKNEKRMKRPAVDIGKIDPEPENTMIQSETSTSTPLLSA 563

Query: 164 EKTIDHNQSMVGHIPESEYFDRSVLRKHDQGPEITSLLPSLHFHALESDQSLLDILQPSV 343
           +  +D+               R+VLRKHDQG +   LL  +HFHAL+SDQ+++DI QPSV
Sbjct: 564 DLVVDNTTEP----------QRAVLRKHDQGYD-NGLLRDVHFHALDSDQNVIDIRQPSV 612

Query: 344 IIVYH 358
           +I YH
Sbjct: 613 VIFYH 617


>ref|XP_006368936.1| hypothetical protein POPTR_0001s15040g [Populus trichocarpa]
           gi|550347295|gb|ERP65505.1| hypothetical protein
           POPTR_0001s15040g [Populus trichocarpa]
          Length = 925

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
 Frame = +2

Query: 140 ETNPSKNEEKTIDHNQSMVGHIPESEY----FDRSVLRKHDQ-----GPEITSLLPSLHF 292
           E + SKN+ +T++++Q+ +    E+       D+  L++H +     G      +P +HF
Sbjct: 582 EISGSKNKSQTVENDQAAIDGYYEANLQRASVDKGALQRHAEELGLTGSRNAKPIPPVHF 641

Query: 293 HALESDQSLLDILQPSVIIVYH 358
           HALESDQ +LDIL+PSV+IVYH
Sbjct: 642 HALESDQPILDILKPSVVIVYH 663


>ref|XP_006368935.1| hypothetical protein POPTR_0001s15040g [Populus trichocarpa]
           gi|550347294|gb|ERP65504.1| hypothetical protein
           POPTR_0001s15040g [Populus trichocarpa]
          Length = 913

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
 Frame = +2

Query: 140 ETNPSKNEEKTIDHNQSMVGHIPESEY----FDRSVLRKHDQ-----GPEITSLLPSLHF 292
           E + SKN+ +T++++Q+ +    E+       D+  L++H +     G      +P +HF
Sbjct: 582 EISGSKNKSQTVENDQAAIDGYYEANLQRASVDKGALQRHAEELGLTGSRNAKPIPPVHF 641

Query: 293 HALESDQSLLDILQPSVIIVYH 358
           HALESDQ +LDIL+PSV+IVYH
Sbjct: 642 HALESDQPILDILKPSVVIVYH 663


>ref|XP_002303239.2| hypothetical protein POPTR_0003s03170g, partial [Populus
           trichocarpa] gi|550342315|gb|EEE78218.2| hypothetical
           protein POPTR_0003s03170g, partial [Populus trichocarpa]
          Length = 692

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
 Frame = +2

Query: 140 ETNPSKNEEKTIDHNQSMVGHIPESEYFDRSV----LRKHDQ-----GPEITSLLPSLHF 292
           E + SKN+ +T++++Q+ +    E+     SV    L++H +     G      +P +HF
Sbjct: 572 EISGSKNKSQTVENDQAAIDGYYEANLQRASVNKGALQRHAEELGLTGSRNAKPIPPVHF 631

Query: 293 HALESDQSLLDILQPSVIIVYH 358
           HALESDQ +LDIL+PSV+IVYH
Sbjct: 632 HALESDQPILDILKPSVVIVYH 653


>ref|XP_002326681.1| predicted protein [Populus trichocarpa]
          Length = 982

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
 Frame = +2

Query: 140 ETNPSKNEEKTIDHNQSMVGHIPESEYFDRSV----LRKHDQ-----GPEITSLLPSLHF 292
           E + SKN+ +T++++Q+ +    E+     SV    L++H +     G      +P +HF
Sbjct: 582 EISGSKNKSQTVENDQAAIDGYYEANLQRASVNKGALQRHAEELGLTGSRNAKPIPPVHF 641

Query: 293 HALESDQSLLDILQPSVIIVYH 358
           HALESDQ +LDIL+PSV+IVYH
Sbjct: 642 HALESDQPILDILKPSVVIVYH 663


>gb|EXC26778.1| DNA repair endonuclease UVH1 [Morus notabilis]
          Length = 772

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
 Frame = +2

Query: 119 SETSLQSETNPSKNEEKTIDHNQSMVGHIPESEYFDRSVLRKHDQGPEITSL-------- 274
           +E+SL++E    + +    D     +G    +E   + VLR+H+Q  E T          
Sbjct: 356 NESSLENEGQTGEADPVAADGFSEAIGDDASTE---KGVLRRHNQVAEATGSGAGSANKP 412

Query: 275 LPSLHFHALESDQSLLDILQPSVIIVYH 358
           +P +HF+ALES Q +LDIL+PSVIIVYH
Sbjct: 413 IPPVHFYALESGQPILDILKPSVIIVYH 440


>gb|ESW28588.1| hypothetical protein PHAVU_002G001900g [Phaseolus vulgaris]
          Length = 986

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
 Frame = +2

Query: 98  IGKTDPQSETSLQSETNPSKNEEKTIDHNQSMVGH----IPESEYFDRSVLRKH---DQG 256
           +   D +     +   + SKNE    + N    G     + E    +  VLRKH   D  
Sbjct: 561 VQNNDKEESVGNKIGMSDSKNEVNEDEINHVSAGRFSEIMEEGTSVENIVLRKHTNPDVA 620

Query: 257 PEITSLLPSLHFHALESDQSLLDILQPSVIIVYH 358
            +    LP +HF+ALESDQ +LDIL+PS++IVYH
Sbjct: 621 EKTGKPLPPVHFYALESDQPILDILKPSIVIVYH 654


>gb|ESW28587.1| hypothetical protein PHAVU_002G001900g [Phaseolus vulgaris]
          Length = 823

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
 Frame = +2

Query: 98  IGKTDPQSETSLQSETNPSKNEEKTIDHNQSMVGH----IPESEYFDRSVLRKH---DQG 256
           +   D +     +   + SKNE    + N    G     + E    +  VLRKH   D  
Sbjct: 561 VQNNDKEESVGNKIGMSDSKNEVNEDEINHVSAGRFSEIMEEGTSVENIVLRKHTNPDVA 620

Query: 257 PEITSLLPSLHFHALESDQSLLDILQPSVIIVYH 358
            +    LP +HF+ALESDQ +LDIL+PS++IVYH
Sbjct: 621 EKTGKPLPPVHFYALESDQPILDILKPSIVIVYH 654


>gb|ESW28586.1| hypothetical protein PHAVU_002G001900g [Phaseolus vulgaris]
          Length = 985

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
 Frame = +2

Query: 98  IGKTDPQSETSLQSETNPSKNEEKTIDHNQSMVGH----IPESEYFDRSVLRKH---DQG 256
           +   D +     +   + SKNE    + N    G     + E    +  VLRKH   D  
Sbjct: 560 VQNNDKEESVGNKIGMSDSKNEVNEDEINHVSAGRFSEIMEEGTSVENIVLRKHTNPDVA 619

Query: 257 PEITSLLPSLHFHALESDQSLLDILQPSVIIVYH 358
            +    LP +HF+ALESDQ +LDIL+PS++IVYH
Sbjct: 620 EKTGKPLPPVHFYALESDQPILDILKPSIVIVYH 653


>ref|XP_004511741.1| PREDICTED: DNA repair endonuclease UVH1-like isoform X2 [Cicer
           arietinum]
          Length = 971

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
 Frame = +2

Query: 152 SKNEEKTIDHNQSMVGHIPESEY----FDRSVLRKH---DQGPEITSLLPSLHFHALESD 310
           SKNE  T + +    G   E+++     D  VLR+H   D        LP +HF+ALESD
Sbjct: 564 SKNEVHTSETSPVSAGRFCETKHGGTSADDMVLRRHTCPDAVARDGKPLPPVHFYALESD 623

Query: 311 QSLLDILQPSVIIVYH 358
           Q +LDIL+PS+IIVYH
Sbjct: 624 QPILDILKPSIIIVYH 639


>ref|XP_004511740.1| PREDICTED: DNA repair endonuclease UVH1-like isoform X1 [Cicer
           arietinum]
          Length = 985

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
 Frame = +2

Query: 152 SKNEEKTIDHNQSMVGHIPESEY----FDRSVLRKH---DQGPEITSLLPSLHFHALESD 310
           SKNE  T + +    G   E+++     D  VLR+H   D        LP +HF+ALESD
Sbjct: 578 SKNEVHTSETSPVSAGRFCETKHGGTSADDMVLRRHTCPDAVARDGKPLPPVHFYALESD 637

Query: 311 QSLLDILQPSVIIVYH 358
           Q +LDIL+PS+IIVYH
Sbjct: 638 QPILDILKPSIIIVYH 653


>ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ricinus
           communis] gi|223529184|gb|EEF31160.1| DNA repair
           endonuclease xp-f / mei-9 / rad1, putative [Ricinus
           communis]
          Length = 887

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
 Frame = +2

Query: 134 QSETNPSKNEEKTIDHNQSMVGHIPESEYFDRSVLRKHDQGPEI----TSLLPSLHFHAL 301
           +   NP  + E  ++    + G+   S   ++ VLR+H Q  +        +PS+HF+A 
Sbjct: 478 RGRANPQNSGEDNVNSELKISGYSRASS-IEQGVLRRHTQQLDPLQSNAKQIPSVHFYAQ 536

Query: 302 ESDQSLLDILQPSVIIVYH 358
           ESDQ +LDIL+PSVIIVYH
Sbjct: 537 ESDQPILDILKPSVIIVYH 555


Top