BLASTX nr result

ID: Rehmannia24_contig00018504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018504
         (565 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006286950.1| hypothetical protein CARUB_v10000097mg [Caps...    62   1e-07
ref|NP_850847.1| chromatin remodeling factor17 [Arabidopsis thal...    60   4e-07
ref|XP_006356696.1| PREDICTED: putative chromatin-remodeling com...    60   5e-07
ref|XP_004241070.1| PREDICTED: putative chromatin-remodeling com...    60   5e-07
ref|XP_002873907.1| hypothetical protein ARALYDRAFT_488746 [Arab...    59   1e-06
ref|XP_006342770.1| PREDICTED: putative chromatin-remodeling com...    58   2e-06
ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling com...    57   4e-06
ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling com...    57   4e-06
ref|XP_006400411.1| hypothetical protein EUTSA_v10012527mg [Eutr...    55   9e-06

>ref|XP_006286950.1| hypothetical protein CARUB_v10000097mg [Capsella rubella]
            gi|482555656|gb|EOA19848.1| hypothetical protein
            CARUB_v10000097mg [Capsella rubella]
          Length = 1072

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKRK 115
            TPSKRA+ RQA ESP S +KKR+QLSMDDYV+SGK+RK
Sbjct: 1035 TPSKRASGRQANESPSSLLKKRKQLSMDDYVSSGKRRK 1072


>ref|NP_850847.1| chromatin remodeling factor17 [Arabidopsis thaliana]
            gi|332005205|gb|AED92588.1| chromatin remodeling factor17
            [Arabidopsis thaliana]
          Length = 1072

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKRK 115
            TPSKR + RQA ESP S +KKR+QLSMDDYV+SGK+RK
Sbjct: 1035 TPSKRPSGRQANESPSSLLKKRKQLSMDDYVSSGKRRK 1072


>ref|XP_006356696.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
            [Solanum tuberosum]
          Length = 1058

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKRK 115
            TPSKR  ARQAAESP S +KKR+QLSMDDYV+SGK+RK
Sbjct: 1022 TPSKRTLARQAAESP-SALKKRKQLSMDDYVSSGKRRK 1058


>ref|XP_004241070.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
            [Solanum lycopersicum]
          Length = 1062

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKRK 115
            TPSKR  ARQAAESP S +KKR+QLSMDDYV+SGK+RK
Sbjct: 1026 TPSKRTLARQAAESP-SALKKRKQLSMDDYVSSGKRRK 1062


>ref|XP_002873907.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp.
            lyrata] gi|297319744|gb|EFH50166.1| hypothetical protein
            ARALYDRAFT_488746 [Arabidopsis lyrata subsp. lyrata]
          Length = 1074

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKRK 115
            TPSK+ + RQA ESP S +KKR+QLSMDDYV+SGK+RK
Sbjct: 1037 TPSKQPSGRQANESPSSLLKKRKQLSMDDYVSSGKRRK 1074


>ref|XP_006342770.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
            isoform X1 [Solanum tuberosum]
          Length = 1064

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKR 112
            TPSKRA ARQAA+SPP T KKR+Q SMDDYV+SGK+R
Sbjct: 1024 TPSKRAVARQAAKSPP-TSKKRKQSSMDDYVSSGKRR 1059


>ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling complex ATPase chain isoform
            2 [Vitis vinifera]
          Length = 1068

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKRK 115
            TPSKRA ARQA ESP S +KKR+QL MDDYV+SGK+RK
Sbjct: 1032 TPSKRAMARQATESPTS-VKKRKQLLMDDYVSSGKRRK 1068


>ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling complex ATPase chain isoform
            1 [Vitis vinifera] gi|297736902|emb|CBI26103.3| unnamed
            protein product [Vitis vinifera]
          Length = 1080

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKRK 115
            TPSKRA ARQA ESP S +KKR+QL MDDYV+SGK+RK
Sbjct: 1044 TPSKRAMARQATESPTS-VKKRKQLLMDDYVSSGKRRK 1080


>ref|XP_006400411.1| hypothetical protein EUTSA_v10012527mg [Eutrema salsugineum]
            gi|567175370|ref|XP_006400412.1| hypothetical protein
            EUTSA_v10012527mg [Eutrema salsugineum]
            gi|557101501|gb|ESQ41864.1| hypothetical protein
            EUTSA_v10012527mg [Eutrema salsugineum]
            gi|557101502|gb|ESQ41865.1| hypothetical protein
            EUTSA_v10012527mg [Eutrema salsugineum]
          Length = 1069

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +2

Query: 2    TPSKRAAARQAAESPPSTMKKRRQLSMDDYVTSGKKRK 115
            TPSKRA ARQ+ ES PS +KKR+QLSMDD+V+SGK+RK
Sbjct: 1033 TPSKRALARQSNESNPS-LKKRKQLSMDDFVSSGKRRK 1069


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