BLASTX nr result

ID: Rehmannia24_contig00018411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018411
         (449 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006476359.1| PREDICTED: F-box protein SKIP8-like [Citrus ...    58   1e-06
ref|XP_006439315.1| hypothetical protein CICLE_v10021394mg [Citr...    58   1e-06
ref|XP_006288464.1| hypothetical protein CARUB_v10001724mg [Caps...    57   3e-06
ref|XP_006288463.1| hypothetical protein CARUB_v10001724mg [Caps...    57   3e-06
gb|EMJ10590.1| hypothetical protein PRUPE_ppa009155mg [Prunus pe...    56   4e-06
ref|XP_002299461.2| hypothetical protein POPTR_0001s10800g [Popu...    56   6e-06
ref|XP_004968943.1| PREDICTED: F-box protein SKIP8-like [Setaria...    55   7e-06
ref|XP_002874655.1| F-box family protein [Arabidopsis lyrata sub...    55   7e-06
gb|EPS61006.1| hypothetical protein M569_13797, partial [Genlise...    55   1e-05
gb|EOY25066.1| Nuclear transport factor 2 family protein [Theobr...    55   1e-05
emb|CBI24803.3| unnamed protein product [Vitis vinifera]               55   1e-05
ref|XP_002509987.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>ref|XP_006476359.1| PREDICTED: F-box protein SKIP8-like [Citrus sinensis]
          Length = 297

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -2

Query: 109 ENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           E G  ASM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 92  ERGSGASMMEQLVPEITTHALSYLDYPSLCRLSMTN 127


>ref|XP_006439315.1| hypothetical protein CICLE_v10021394mg [Citrus clementina]
           gi|557541577|gb|ESR52555.1| hypothetical protein
           CICLE_v10021394mg [Citrus clementina]
          Length = 297

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -2

Query: 109 ENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           E G  ASM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 92  ERGSGASMMEQLVPEITTHALSYLDYPSLCRLSMTN 127


>ref|XP_006288464.1| hypothetical protein CARUB_v10001724mg [Capsella rubella]
           gi|482557170|gb|EOA21362.1| hypothetical protein
           CARUB_v10001724mg [Capsella rubella]
          Length = 267

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/50 (54%), Positives = 33/50 (66%)
 Frame = -2

Query: 151 GEKMAAHVIGNDNIENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           GE      + N  +++    SM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 51  GEMREVTAVTNAVVDDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTN 100


>ref|XP_006288463.1| hypothetical protein CARUB_v10001724mg [Capsella rubella]
           gi|482557169|gb|EOA21361.1| hypothetical protein
           CARUB_v10001724mg [Capsella rubella]
          Length = 234

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/50 (54%), Positives = 33/50 (66%)
 Frame = -2

Query: 151 GEKMAAHVIGNDNIENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           GE      + N  +++    SM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 18  GEMREVTAVTNAVVDDKPGVSMMEQLVPEITTHALSYLDYPSLCRLSMTN 67


>gb|EMJ10590.1| hypothetical protein PRUPE_ppa009155mg [Prunus persica]
          Length = 304

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 11/66 (16%)
 Frame = -2

Query: 166 SGIDSGEKMAAHVIGNDNIENGEE-----------ASMLEQLLPEATMHVLSYLDYQSLC 20
           SG DS    A H+ G    +  E+           ASM+EQL+PE T H LSYLDY SLC
Sbjct: 70  SGSDSEPLRAPHLNGGTGPDVTEKTATAITERQTGASMMEQLVPEITTHALSYLDYPSLC 129

Query: 19  RLSMTN 2
           RLSMTN
Sbjct: 130 RLSMTN 135


>ref|XP_002299461.2| hypothetical protein POPTR_0001s10800g [Populus trichocarpa]
           gi|550346973|gb|EEE84266.2| hypothetical protein
           POPTR_0001s10800g [Populus trichocarpa]
          Length = 302

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -2

Query: 112 IENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           +E    ASM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 95  VEKQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTN 131


>ref|XP_004968943.1| PREDICTED: F-box protein SKIP8-like [Setaria italica]
          Length = 286

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -2

Query: 103 GEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           G  ASM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 82  GGGASMMEQLVPEITTHALSYLDYTSLCRLSMTN 115


>ref|XP_002874655.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320492|gb|EFH50914.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/54 (51%), Positives = 35/54 (64%)
 Frame = -2

Query: 163 GIDSGEKMAAHVIGNDNIENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           G++  E  A+  + +D        SM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 16  GVERTEVTASSTVADDK----PGVSMMEQLVPEITTHALSYLDYPSLCRLSMTN 65


>gb|EPS61006.1| hypothetical protein M569_13797, partial [Genlisea aurea]
          Length = 229

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
 Frame = -2

Query: 172 ERSGIDSGEKMAAHVIGNDNIENGEEA--------SMLEQLLPEATMHVLSYLDYQSLCR 17
           ER     G+ + A +IG +  +  + A        SM+EQL+PE T H LSYLD+ SLCR
Sbjct: 9   ERCENHCGKAITARLIGGNRDKGSDAAMDNRLTGASMMEQLVPEITTHALSYLDFPSLCR 68

Query: 16  LSMTN 2
           LSMTN
Sbjct: 69  LSMTN 73


>gb|EOY25066.1| Nuclear transport factor 2 family protein [Theobroma cacao]
          Length = 309

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -2

Query: 109 ENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           E    ASM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 104 ERQSGASMMEQLVPEITTHALSYLDYPSLCRLSMTN 139


>emb|CBI24803.3| unnamed protein product [Vitis vinifera]
          Length = 90

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -2

Query: 109 ENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           E    ASM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 24  ERQTRASMMEQLVPEITTHALSYLDYLSLCRLSMTN 59


>ref|XP_002509987.1| conserved hypothetical protein [Ricinus communis]
           gi|223549886|gb|EEF51374.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
 Frame = -2

Query: 160 IDSGEKMAAHVIGNDN---IENGEEASMLEQLLPEATMHVLSYLDYQSLCRLSMTN 2
           I+ G  M A V        ++    ASM+EQL+PE T H LSYLDY SLCRLSMTN
Sbjct: 77  INGGGDMVAAVTTTTEKGVVDRQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTN 132


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