BLASTX nr result
ID: Rehmannia24_contig00018101
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00018101
(609 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 364 1e-98
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 364 1e-98
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 358 6e-97
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 350 1e-94
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 350 1e-94
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 342 6e-92
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 335 7e-90
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 331 8e-89
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 331 8e-89
gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [... 328 9e-88
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 324 1e-86
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus... 323 2e-86
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 322 4e-86
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 321 9e-86
ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III s... 314 1e-83
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 314 1e-83
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 312 5e-83
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 310 2e-82
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 308 7e-82
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 307 2e-81
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 364 bits (934), Expect = 1e-98
Identities = 177/197 (89%), Positives = 184/197 (93%)
Frame = +3
Query: 18 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 197
+SL W DLQMEVAQYINSDVRGVPL+M A RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301 KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360
Query: 198 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 377
GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361 GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420
Query: 378 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 557
DG+ ISLM RKRHADELK+GYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421 DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480
Query: 558 LRFNESVCNPYNADFDG 608
LRFNESVCNPYNADFDG
Sbjct: 481 LRFNESVCNPYNADFDG 497
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 364 bits (934), Expect = 1e-98
Identities = 177/197 (89%), Positives = 184/197 (93%)
Frame = +3
Query: 18 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 197
+SL W DLQMEVAQYINSDVRGVPL+M A RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301 KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360
Query: 198 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 377
GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361 GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420
Query: 378 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 557
DG+ ISLM RKRHADELK+GYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421 DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480
Query: 558 LRFNESVCNPYNADFDG 608
LRFNESVCNPYNADFDG
Sbjct: 481 LRFNESVCNPYNADFDG 497
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 358 bits (919), Expect = 6e-97
Identities = 174/197 (88%), Positives = 182/197 (92%)
Frame = +3
Query: 18 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 197
+SL W DLQMEVAQYINSDVRGVPL M RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301 KSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360
Query: 198 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 377
GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361 GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420
Query: 378 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 557
DG +SLM + RKR+ADELK+GYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421 DGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480
Query: 558 LRFNESVCNPYNADFDG 608
LRFNESVCNPYNADFDG
Sbjct: 481 LRFNESVCNPYNADFDG 497
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 350 bits (899), Expect = 1e-94
Identities = 171/202 (84%), Positives = 183/202 (90%)
Frame = +3
Query: 3 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGK 182
T ++ L WD LQ+EVAQYINSDVRGVPL M AARPLSGFVQRLKGKQGRFRGNLSGK
Sbjct: 299 TGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGK 358
Query: 183 RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 362
RVEYTGRTVISPDPNLKI +VAIPILMA+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK
Sbjct: 359 RVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAK 418
Query: 363 YIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 542
IR PDG++ SLM + RKR ADELKYGYIV+RHLEDGD+VLFNRQPSLHRMSIM HRARI
Sbjct: 419 LIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARI 478
Query: 543 MPWRTLRFNESVCNPYNADFDG 608
MPWRTLRFNESVCNPYNADFDG
Sbjct: 479 MPWRTLRFNESVCNPYNADFDG 500
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 350 bits (899), Expect = 1e-94
Identities = 171/202 (84%), Positives = 183/202 (90%)
Frame = +3
Query: 3 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGK 182
T ++ L WD LQ+EVAQYINSDVRGVPL M AARPLSGFVQRLKGKQGRFRGNLSGK
Sbjct: 299 TGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGK 358
Query: 183 RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 362
RVEYTGRTVISPDPNLKI +VAIPILMA+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK
Sbjct: 359 RVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAK 418
Query: 363 YIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 542
IR PDG++ SLM + RKR ADELKYGYIV+RHLEDGD+VLFNRQPSLHRMSIM HRARI
Sbjct: 419 LIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARI 478
Query: 543 MPWRTLRFNESVCNPYNADFDG 608
MPWRTLRFNESVCNPYNADFDG
Sbjct: 479 MPWRTLRFNESVCNPYNADFDG 500
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 342 bits (876), Expect = 6e-92
Identities = 165/203 (81%), Positives = 184/203 (90%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMT-AARPLSGFVQRLKGKQGRFRGNLSG 179
TN++ + +TSW+ LQ+EVAQYINSD RG+PLY +++PLSGFVQRLKGKQGRFRGNLSG
Sbjct: 291 TNIYKKGVTSWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSG 350
Query: 180 KRVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGA 359
KRVEYTGRTVISPDPNLKI +VA+PILMA+ILTYPERVSH NI +LR+CVR GPN+YPGA
Sbjct: 351 KRVEYTGRTVISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGA 410
Query: 360 KYIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRAR 539
K+IRQPDGT ISL + RK HAD LKYG IVDRHL+DGDIVLFNRQPSLHRMSIM HRAR
Sbjct: 411 KFIRQPDGTEISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRAR 470
Query: 540 IMPWRTLRFNESVCNPYNADFDG 608
IMPWRTLRFNESVCNPYNADFDG
Sbjct: 471 IMPWRTLRFNESVCNPYNADFDG 493
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 335 bits (858), Expect = 7e-90
Identities = 162/202 (80%), Positives = 178/202 (88%)
Frame = +3
Query: 3 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGK 182
TN + L W+ LQ+EVAQYINSDVRGVP M ++PLSGFVQR+KGK GRFRGNLSGK
Sbjct: 296 TNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGK 355
Query: 183 RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 362
RVEYTGRTVISPDPNLKI +VAIPI MARILTYPERVS+HNIEKLRQCVRNGP+KYPGA+
Sbjct: 356 RVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGAR 415
Query: 363 YIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 542
+R PDG+ L+ + RKR ADELK+G +VDRHLEDGDIVLFNRQPSLHRMSIM HRARI
Sbjct: 416 MVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARI 475
Query: 543 MPWRTLRFNESVCNPYNADFDG 608
MPWRTLRFNESVCNPYNADFDG
Sbjct: 476 MPWRTLRFNESVCNPYNADFDG 497
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 331 bits (849), Expect = 8e-89
Identities = 162/197 (82%), Positives = 172/197 (87%)
Frame = +3
Query: 18 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 197
+SL W+ LQ+EVAQYINSDVRGVP M ARPLSGFVQRLKGKQGRFRGNLSGKRVEYT
Sbjct: 308 KSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 367
Query: 198 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 377
GRTVISPDPNLKI +VAIPI MARILTYPERVS HNIEKLRQC++NGP+KYPGA+ IR P
Sbjct: 368 GRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYP 427
Query: 378 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 557
DGT L R + A ELK G IVDRHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 428 DGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 487
Query: 558 LRFNESVCNPYNADFDG 608
LRFNESVCNPYNADFDG
Sbjct: 488 LRFNESVCNPYNADFDG 504
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 331 bits (849), Expect = 8e-89
Identities = 162/197 (82%), Positives = 172/197 (87%)
Frame = +3
Query: 18 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 197
+SL W+ LQ+EVAQYINSDVRGVP M ARPLSGFVQRLKGKQGRFRGNLSGKRVEYT
Sbjct: 323 KSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 382
Query: 198 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 377
GRTVISPDPNLKI +VAIPI MARILTYPERVS HNIEKLRQC++NGP+KYPGA+ IR P
Sbjct: 383 GRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYP 442
Query: 378 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 557
DGT L R + A ELK G IVDRHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 443 DGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 502
Query: 558 LRFNESVCNPYNADFDG 608
LRFNESVCNPYNADFDG
Sbjct: 503 LRFNESVCNPYNADFDG 519
>gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
Length = 867
Score = 328 bits (840), Expect = 9e-88
Identities = 160/197 (81%), Positives = 173/197 (87%)
Frame = +3
Query: 18 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 197
+ L SWD LQ+EVAQYINSD+RGVP M A+PLSGFVQRLKGK GRFRGNLSGKRVEYT
Sbjct: 311 KCLASWDILQVEVAQYINSDIRGVPFSMQTAKPLSGFVQRLKGKGGRFRGNLSGKRVEYT 370
Query: 198 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 377
GRTVISPDPNLKI +V +PI MA+ILTYPERVSHHNIEKLRQCV NGP+KYPGA+ +R P
Sbjct: 371 GRTVISPDPNLKITEVGVPIKMAQILTYPERVSHHNIEKLRQCVSNGPDKYPGARMLRNP 430
Query: 378 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 557
DGT SL N RK AD LKYG IV+RHLEDGDIVLFNRQPSLHRMSIM HRA++MPWRT
Sbjct: 431 DGTEWSLKVN-RKNAADGLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRAKVMPWRT 489
Query: 558 LRFNESVCNPYNADFDG 608
LRFNESVCNPYNADFDG
Sbjct: 490 LRFNESVCNPYNADFDG 506
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 324 bits (830), Expect = 1e-86
Identities = 156/202 (77%), Positives = 175/202 (86%)
Frame = +3
Query: 3 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGK 182
+N + L SWD LQ EVAQ INSDVRG+P M ++PL+GFVQRLKGKQGRFRGNL GK
Sbjct: 295 SNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGK 354
Query: 183 RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 362
RVE+TGRTVISPDPNLKI +VA+PI MARILTYPERV+ HNIEKLRQCV NGP+KYPGA+
Sbjct: 355 RVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGAR 414
Query: 363 YIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 542
+R DG++ SLM + RKR ADELKYG IV+RHLEDGD+VLFNRQPSLHRMSIM HR R+
Sbjct: 415 MLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRV 474
Query: 543 MPWRTLRFNESVCNPYNADFDG 608
MPWRTLRFNESVCNPYNADFDG
Sbjct: 475 MPWRTLRFNESVCNPYNADFDG 496
>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 323 bits (828), Expect = 2e-86
Identities = 157/202 (77%), Positives = 177/202 (87%)
Frame = +3
Query: 3 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGK 182
+++ ++ L W+ LQ EVAQ+INS+VRG+P YM + + L+GFVQRLKGK GRFRGNLSGK
Sbjct: 298 SSVSSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNLSGK 357
Query: 183 RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 362
RVEYTGRTVISPDPNLKI++VAIPILMA ILTYPERV+HHNIEKLRQCVRNGP+KYPGA+
Sbjct: 358 RVEYTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGAR 417
Query: 363 YIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 542
+R+ G SL RKR ADEL+ G IVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI
Sbjct: 418 MLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 477
Query: 543 MPWRTLRFNESVCNPYNADFDG 608
MPWRTLRFNESVCNPYNADFDG
Sbjct: 478 MPWRTLRFNESVCNPYNADFDG 499
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Glycine max]
Length = 1391
Score = 322 bits (826), Expect = 4e-86
Identities = 158/198 (79%), Positives = 172/198 (86%)
Frame = +3
Query: 15 NRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 194
++ L WD LQ EVAQ+INSDVRG+P YM + L+GFVQRLKGK GRFRGNLSGKRVEY
Sbjct: 302 SKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRGNLSGKRVEY 361
Query: 195 TGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQ 374
TGRTVISPDPNLKI++VAIPI MARILTYPERV+HHNIEKLRQCVRNGP+KYPGA+ +R+
Sbjct: 362 TGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRR 421
Query: 375 PDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 554
G SL RKR ADEL+ G IVDRHLEDGDIVLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 422 DGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWR 481
Query: 555 TLRFNESVCNPYNADFDG 608
TLRFNESVCNPYNADFDG
Sbjct: 482 TLRFNESVCNPYNADFDG 499
>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc1-like, partial [Cucumis sativus]
Length = 693
Score = 321 bits (823), Expect = 9e-86
Identities = 154/193 (79%), Positives = 171/193 (88%)
Frame = +3
Query: 30 SWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTV 209
SWD LQ EVAQ INSDVRG+P M ++PL+GFVQRLKGKQGRFRGNL GKRVE+TGRTV
Sbjct: 2 SWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTV 61
Query: 210 ISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDGTL 389
ISPDPNLKI +VA+PI MARILTYPERV+ HNIEKLRQCV NGP+KYPGA+ +R DG++
Sbjct: 62 ISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGSM 121
Query: 390 ISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 569
SLM + RKR ADELKYG IV+RHLEDGD+VLFNRQPSLHRMSIM HR R+MPWRTLRFN
Sbjct: 122 RSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFN 181
Query: 570 ESVCNPYNADFDG 608
ESVCNPYNADFDG
Sbjct: 182 ESVCNPYNADFDG 194
>ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Cicer arietinum]
Length = 1291
Score = 314 bits (804), Expect = 1e-83
Identities = 152/189 (80%), Positives = 168/189 (88%)
Frame = +3
Query: 42 LQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPD 221
LQ VAQYINSDV+G P M A++PL+GFVQR+KGKQGRFR NLSGKRVEYTGRTVISPD
Sbjct: 201 LQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRVEYTGRTVISPD 260
Query: 222 PNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDGTLISLM 401
PNLKI +VAIPI MARILTYPERV+HHNIEKLRQC+RNGP+KYPGAK +R GT +L
Sbjct: 261 PNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAGGTTWNLK 320
Query: 402 NNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVC 581
+ RKR ADEL++G IVDRHLEDGD+VLFNRQPSLHRMS+M HRARIMPWRTLRFNESVC
Sbjct: 321 VSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTLRFNESVC 380
Query: 582 NPYNADFDG 608
NPYNADFDG
Sbjct: 381 NPYNADFDG 389
>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Cicer arietinum]
Length = 1399
Score = 314 bits (804), Expect = 1e-83
Identities = 152/189 (80%), Positives = 168/189 (88%)
Frame = +3
Query: 42 LQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPD 221
LQ VAQYINSDV+G P M A++PL+GFVQR+KGKQGRFR NLSGKRVEYTGRTVISPD
Sbjct: 309 LQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRVEYTGRTVISPD 368
Query: 222 PNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDGTLISLM 401
PNLKI +VAIPI MARILTYPERV+HHNIEKLRQC+RNGP+KYPGAK +R GT +L
Sbjct: 369 PNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAGGTTWNLK 428
Query: 402 NNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVC 581
+ RKR ADEL++G IVDRHLEDGD+VLFNRQPSLHRMS+M HRARIMPWRTLRFNESVC
Sbjct: 429 VSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTLRFNESVC 488
Query: 582 NPYNADFDG 608
NPYNADFDG
Sbjct: 489 NPYNADFDG 497
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 312 bits (799), Expect = 5e-83
Identities = 152/197 (77%), Positives = 170/197 (86%)
Frame = +3
Query: 18 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 197
+++ WD +Q EVAQYINS+VRG+P ++PLSG +QRLKGKQGRFR NLSGKRVEYT
Sbjct: 308 KNMQVWDTVQSEVAQYINSEVRGIP-NQPDSKPLSGILQRLKGKQGRFRANLSGKRVEYT 366
Query: 198 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 377
GRTVISPDPNLKI +V IPILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ +R P
Sbjct: 367 GRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARSVRYP 426
Query: 378 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 557
DG+ +L+ + RKR ADEL G IVDRHLE+GD VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 427 DGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPWRT 486
Query: 558 LRFNESVCNPYNADFDG 608
LRFNESVCNPYNADFDG
Sbjct: 487 LRFNESVCNPYNADFDG 503
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 310 bits (795), Expect = 2e-82
Identities = 154/198 (77%), Positives = 168/198 (84%)
Frame = +3
Query: 15 NRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 194
N+ L SWD LQ VA Y+NSDVR VP + +PLSGFVQRLKGKQGRFRGNLSGKRVE+
Sbjct: 277 NKYLDSWDGLQAAVALYMNSDVR-VPNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEF 335
Query: 195 TGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQ 374
TGRTVISPDPNLKI +VAIPI MARIL+YPERVSHHNIEKLRQ V NGP KYPGA +R
Sbjct: 336 TGRTVISPDPNLKITEVAIPIHMARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRY 395
Query: 375 PDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 554
PDG+ L+ + RK A+EL +G IVDRHLEDGD+VLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 396 PDGSSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 455
Query: 555 TLRFNESVCNPYNADFDG 608
TLRFNESVCNPYNADFDG
Sbjct: 456 TLRFNESVCNPYNADFDG 473
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 308 bits (789), Expect = 7e-82
Identities = 156/207 (75%), Positives = 169/207 (81%), Gaps = 12/207 (5%)
Frame = +3
Query: 24 LTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGR 203
L +WD LQ VA YINSDVRG+P + SGF+QRLKGKQGRFRGNLSGKRVEYTGR
Sbjct: 75 LENWDALQAHVALYINSDVRGIPPPKPGEKQYSGFIQRLKGKQGRFRGNLSGKRVEYTGR 134
Query: 204 TVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQPDG 383
TVISPDPNLKI +VAIPI MARILTYPERVSHHNIEKLRQCV NGP+KYPGA+ +R+ DG
Sbjct: 135 TVISPDPNLKITEVAIPIRMARILTYPERVSHHNIEKLRQCVSNGPDKYPGARMLRRADG 194
Query: 384 T----LISL--------MNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMS 527
+ LI + RKR ADELKYG IV+RHLEDGDIVLFNRQPSLHRMSIM
Sbjct: 195 STWQGLICFYYLCGHVSIRVSRKRLADELKYGDIVERHLEDGDIVLFNRQPSLHRMSIMC 254
Query: 528 HRARIMPWRTLRFNESVCNPYNADFDG 608
HRAR+MPWRTLRFNESVCNPYNADFDG
Sbjct: 255 HRARVMPWRTLRFNESVCNPYNADFDG 281
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 307 bits (786), Expect = 2e-81
Identities = 150/197 (76%), Positives = 169/197 (85%)
Frame = +3
Query: 18 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 197
+++ WD +Q EVA+YINS+VRGV ++P+SG +QRLKGKQGRFR NLSGKRVEYT
Sbjct: 307 KNMQVWDTVQSEVAKYINSEVRGVQ-NQPDSKPMSGILQRLKGKQGRFRANLSGKRVEYT 365
Query: 198 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 377
GRTVISPDPNLKI +V IPILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ +R P
Sbjct: 366 GRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVRYP 425
Query: 378 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 557
DG+ +L+ + RKR ADEL G IVDRHLE+GD VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 426 DGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPWRT 485
Query: 558 LRFNESVCNPYNADFDG 608
LRFNESVCNPYNADFDG
Sbjct: 486 LRFNESVCNPYNADFDG 502