BLASTX nr result
ID: Rehmannia24_contig00017993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00017993
(500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp... 62 6e-08
emb|CBI27903.3| unnamed protein product [Vitis vinifera] 62 6e-08
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp... 62 8e-08
ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp... 62 8e-08
gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative i... 57 3e-06
ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Ar... 56 4e-06
tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays] 55 1e-05
ref|XP_001764678.1| predicted protein [Physcomitrella patens] gi... 55 1e-05
ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|... 55 1e-05
>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 884
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNNDD 320
NYQRP A RP+NLLTKRQALARSIELQR EA E+M + N D
Sbjct: 773 NYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGID 832
Query: 319 AETLDLRTSAACDFSDDEDLEMDE 248
+ R +S DED+E DE
Sbjct: 833 DKAFYSRLDGT--YSTDEDMEEDE 854
>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNNDD 320
NYQRP A RP+NLLTKRQALARSIELQR EA E+M + N D
Sbjct: 770 NYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGID 829
Query: 319 AETLDLRTSAACDFSDDEDLEMDE 248
+ R +S DED+E DE
Sbjct: 830 DKAFYSRLDGT--YSTDEDMEEDE 851
>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565382761|ref|XP_006357700.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 820
Score = 62.0 bits (149), Expect = 8e-08
Identities = 41/79 (51%), Positives = 42/79 (53%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNNDD 320
NYQRP FRP+NLLTKRQALARSIELQRREA ED D
Sbjct: 734 NYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITALQDKIQNLKSELEDTNMVEEID 793
Query: 319 AETLDLRTSAACDFSDDED 263
ETL R D SDDED
Sbjct: 794 EETLFSR----LDASDDED 808
>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Solanum lycopersicum]
Length = 812
Score = 62.0 bits (149), Expect = 8e-08
Identities = 41/79 (51%), Positives = 42/79 (53%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNNDD 320
NYQRP FRP+NLLTKRQALARSIELQRREA ED D
Sbjct: 726 NYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITELQDKIQNLKSELEDTEMVEEID 785
Query: 319 AETLDLRTSAACDFSDDED 263
ETL R D SDDED
Sbjct: 786 EETLFSR----LDASDDED 800
>gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
domain-containing protein, putative isoform 1 [Theobroma
cacao]
Length = 873
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNNDD 320
NY RP RP+NLLT+RQALARS+ELQRREA E+M + D
Sbjct: 768 NYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKSELEEMKTGKEID 827
Query: 319 AE-TLDLRTSAACDFSDDEDLEMDEWSD 239
+ T R + A F DED+E EW +
Sbjct: 828 VDKTSYSRLNKAPLF--DEDIEEGEWEE 853
>ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM)
domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 56.2 bits (134), Expect = 4e-06
Identities = 38/88 (43%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNN-- 326
NYQ P RP NLLT+++A ARSIELQRREA +D M N
Sbjct: 737 NYQMPFRLRPSNLLTRKKAFARSIELQRREALKYHVADLEERIELLKTGQDDDMETRNKS 796
Query: 325 -DDAETLDLRTSAACDFSDDEDLEMDEW 245
++ E L LR + DFS DED E EW
Sbjct: 797 DEEEENLYLRVDES-DFSSDED-ESLEW 822
>tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 55.1 bits (131), Expect = 1e-05
Identities = 35/88 (39%), Positives = 44/88 (50%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNNDD 320
NY+RP + RPRNLL+KR+ALARSIELQR +A M
Sbjct: 1355 NYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAELVQMEDVKEQG 1414
Query: 319 AETLDLRTSAACDFSDDEDLEMDEWSDY 236
E L + AA SDDED+E ++ Y
Sbjct: 1415 DEELYAKLDAAYS-SDDEDMEDEDDEAY 1441
>ref|XP_001764678.1| predicted protein [Physcomitrella patens]
gi|162683972|gb|EDQ70377.1| predicted protein
[Physcomitrella patens]
Length = 625
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/87 (35%), Positives = 45/87 (51%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNNDD 320
NYQRP RPR+LLTKRQAL RS+E+QR E+ D S +
Sbjct: 531 NYQRPSELRPRHLLTKRQALKRSLEMQRMESLEKHIRVLKKEIETMQAGLVDGRSATSSV 590
Query: 319 AETLDLRTSAACDFSDDEDLEMDEWSD 239
+E L+++ D D++D +D W++
Sbjct: 591 SE-LEIKKDDVEDDDDEDDFGIDNWTE 616
>ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|gb|ABU96081.1| CRM
family member 3 [Zea mays]
Length = 842
Score = 55.1 bits (131), Expect = 1e-05
Identities = 35/88 (39%), Positives = 44/88 (50%)
Frame = -2
Query: 499 NYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXXXXXXXXXXXXXEDMMSPNNDD 320
NY+RP + RPRNLL+KR+ALARSIELQR +A M
Sbjct: 674 NYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAELVQMEDVKEQG 733
Query: 319 AETLDLRTSAACDFSDDEDLEMDEWSDY 236
E L + AA SDDED+E ++ Y
Sbjct: 734 DEELYAKLDAAYS-SDDEDMEDEDDEAY 760