BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00017975
         (2120 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                         1104   0.0  
gb|AFB73911.1| polyprotein [Citrus sinensis]                         1088   0.0  
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]             1033   0.0  
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]             1028   0.0  
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]             1026   0.0  
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]             1021   0.0  
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                 1007   0.0  
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             986   0.0  
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   669   0.0  
emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera]   640   0.0  
emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera]   636   0.0  
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]   633   0.0  
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]   631   0.0  
emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]   629   0.0  
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           647   0.0  
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]   644   0.0  
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         649   0.0  
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   649   0.0  
emb|CAN61435.1| hypothetical protein VITISV_033767 [Vitis vinifera]   629   0.0  
emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera]   616   0.0  

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 1104 bits (2856), Expect = 0.0
 Identities = 542/652 (83%), Positives = 571/652 (87%), Gaps = 1/652 (0%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + L  + ++ +         WAEA KTACY++NRSPSTAI LKT MEMWTGK ADYS LH
Sbjct: 590  RTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLH 649

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FG PVYVMYN QERTKLDPKSRKCIFLGYADGVKGYRLWDPT HK+VISRDVIF ED+L
Sbjct: 650  AFGCPVYVMYNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQL 709

Query: 526  QEK-GDSNTVKENQETTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERK 702
            Q K GD  TVKE  ET  V VENN +N DS  SEA PEH             RRSTRER+
Sbjct: 710  QRKDGDDGTVKEKSETVPVYVENNPENSDS--SEAAPEHEEQEPVESEAPEVRRSTRERR 767

Query: 703  PPAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLV 882
            PP W SEYV E NVAYCLLTEDGEPSTFHEA  S D + WMTAM EEIEALHKN+TW+LV
Sbjct: 768  PPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELV 827

Query: 883  PLPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXX 1062
            PLPHGRKAIGNKWVYKIKRD NDQVERYRARLVVKGYAQKEGIDFNEIFSP         
Sbjct: 828  PLPHGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRI 887

Query: 1063 XXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQA 1242
              AMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQA
Sbjct: 888  VLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQA 947

Query: 1243 PRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMK 1422
            PRCWYKRFDSFIMSL YNRLSSDHCAYYKRF+DNDFIILLLYVDDMLVAGPNKDRIQE+K
Sbjct: 948  PRCWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELK 1007

Query: 1423 AQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIP 1602
            AQLAREF+MKDLGPANKILGMQIHRDRNNRKIWLSQKNY +KILRRFNMQDCK +STP+P
Sbjct: 1008 AQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSISTPLP 1067

Query: 1603 INFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGRE 1782
            +NFKLSSSMCPSNEAER+EMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPG E
Sbjct: 1068 VNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGE 1127

Query: 1783 HWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVS 1962
            HW  +KR+LRYIRGTS+VALCYGGS+FTVRGYVDSDFAGDLDKRKSTTGYVFTLAG AVS
Sbjct: 1128 HWIAVKRILRYIRGTSNVALCYGGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVS 1187

Query: 1963 WVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            WVSKLQTVVALSTTEAEYMAATQACKEA+WIQRLLEELGHKQ+KI +FCDSQ
Sbjct: 1188 WVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQ 1239



 Score = 67.8 bits (164), Expect(2) = 1e-18
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTVA 128
           +ELESGKKIKCLRTDNGGEYT  EF +  +QEGI+RQFTVA
Sbjct: 536 VELESGKKIKCLRTDNGGEYTDSEFLAFCKQEGIQRQFTVA 576



 Score = 54.3 bits (129), Expect(2) = 1e-18
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = +2

Query: 131 TPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           TPQQNGVAERMNRTL ER RAMLRTA LP +
Sbjct: 578 TPQQNGVAERMNRTLTERIRAMLRTAGLPNS 608


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 1088 bits (2815), Expect = 0.0
 Identities = 535/652 (82%), Positives = 567/652 (86%), Gaps = 1/652 (0%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + L  + ++ +         WAEA KTACY++NRSPSTAI LKT MEMWTGK ADYS LH
Sbjct: 590  RTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLH 649

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FG P+YVMYN QERTKLD KSR+CIFLGYADGVKGYRLWDPT HK+VISRDVIF ED+L
Sbjct: 650  AFGCPMYVMYNAQERTKLDAKSRRCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQL 709

Query: 526  QEK-GDSNTVKENQETTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERK 702
            Q K GD  TVKE  ET  V VENN +N DS  SEA PEH             RRSTRER+
Sbjct: 710  QRKDGDDGTVKEKSETVPVYVENNPENSDS--SEAAPEHEEQEPVESEAPEVRRSTRERR 767

Query: 703  PPAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLV 882
            PP W SEYV E NVAYCLLTEDGEPSTFHEA  SSD + WMTAM EEIEALHKN+TW+LV
Sbjct: 768  PPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELV 827

Query: 883  PLPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXX 1062
            PLP GRKAIGNKWVYKIKRD NDQVERYRARLVVKGYAQKEGIDFNEIFSP         
Sbjct: 828  PLPRGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRI 887

Query: 1063 XXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQA 1242
              AMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQA
Sbjct: 888  VLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQA 947

Query: 1243 PRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMK 1422
            PR WYKRFDSFIMSL YNRLSSDHCAYYKRF+DNDFIILLLYVDDMLVAGPNKDRIQE+K
Sbjct: 948  PRYWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELK 1007

Query: 1423 AQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIP 1602
            AQLAREF+MKDLGPANKILGMQIHRDRNN KIWLSQKNY +KILRRFNMQDCK +ST +P
Sbjct: 1008 AQLAREFEMKDLGPANKILGMQIHRDRNNMKIWLSQKNYLKKILRRFNMQDCKSISTSLP 1067

Query: 1603 INFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGRE 1782
            +NFKLSSSMCPSNEAER+EMSRVPYASAVGSLMFAMICTRPDIAQAVG VSRYMANPG E
Sbjct: 1068 VNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGGE 1127

Query: 1783 HWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVS 1962
            HW  +KR+LRYIRGTSDVALCYGGS+FTVRGYVDSDFAGDLDKRKSTTGYVFTLAG AVS
Sbjct: 1128 HWIAVKRILRYIRGTSDVALCYGGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVS 1187

Query: 1963 WVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            WVSKLQTVVALSTTEAEYMAATQACK+A+WIQRLLEELGHKQ+KI++FCDSQ
Sbjct: 1188 WVSKLQTVVALSTTEAEYMAATQACKKAIWIQRLLEELGHKQQKILVFCDSQ 1239



 Score = 67.4 bits (163), Expect(2) = 2e-18
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTVA 128
           +ELESGKKIKCLRTDNGGEYT  EF +  +QEGI+RQFTVA
Sbjct: 536 VELESGKKIKCLRTDNGGEYTDGEFLAFCKQEGIQRQFTVA 576



 Score = 54.3 bits (129), Expect(2) = 2e-18
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = +2

Query: 131 TPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           TPQQNGVAERMNRTL ER RAMLRTA LP +
Sbjct: 578 TPQQNGVAERMNRTLTERIRAMLRTAGLPNS 608


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 1033 bits (2671), Expect(2) = 0.0
 Identities = 499/651 (76%), Positives = 560/651 (86%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + L+ + ++ ++     +  WAEAVKTACYVINRSPSTAIDLKTPMEMW GK  DYS LH
Sbjct: 590  RTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLH 649

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE++L
Sbjct: 650  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENEL 709

Query: 526  QEKGDSNTVKENQETTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERKP 705
            Q K  +++  +     T IV+   ++++S SSEA P H             RRSTR+ + 
Sbjct: 710  QSKQKNDSTSKE----TAIVQMEEKSKESDSSEAEPVHEEQEPDDVNNGV-RRSTRQTQK 764

Query: 706  PAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVP 885
            P+WQS+YVM S+ AYCL+TE+GEPSTFHEA   SDASQWMTAMHEE+EALH+N+TW+LV 
Sbjct: 765  PSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVE 824

Query: 886  LPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXX 1065
            LP GRKAIGNKWVYKIKRD NDQVERYRARLVVKGYAQKEGIDFNEIFSP          
Sbjct: 825  LPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVV 884

Query: 1066 XAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAP 1245
             AMCA  DLHLEQLDVKTAFLHGELEEEIYMLQPEGF E GKENLVCRL KSLYGLKQAP
Sbjct: 885  LAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAP 944

Query: 1246 RCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKA 1425
            RCWYKRFDSFI+SL+Y+RLSSDHC YYKRFD NDFIILLLYVDDMLV GPNKDR+QE+KA
Sbjct: 945  RCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKA 1004

Query: 1426 QLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPI 1605
            QLAREFDMKDLGPANKILGMQIHRDR +RKIWLSQKNY RK+LRRFNMQDCKP+STP+P+
Sbjct: 1005 QLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPV 1064

Query: 1606 NFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREH 1785
            NFKLSS M PSNEAER EMSRVPYASAVGSLM+AMICTRPDIAQAVG VSR+MA+PG+EH
Sbjct: 1065 NFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEH 1124

Query: 1786 WDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSW 1965
            W+ +KR++RYI+GTS VA+C+GGS+ TVRGYVDSDFAGD DKRKSTTGYVFTLAGGAVSW
Sbjct: 1125 WNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSW 1184

Query: 1966 VSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            +SKLQTVVALSTTEAEYMAATQACKEA+W+QRL+EELGHKQE+I ++CDSQ
Sbjct: 1185 LSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQ 1235



 Score = 65.5 bits (158), Expect(2) = 0.0
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = +3

Query: 3   QIELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTVA 128
           QIELE+GKKIKCLRTDNGGEY   EF +  +QEGI RQFTVA
Sbjct: 535 QIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVA 576


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 1028 bits (2658), Expect(2) = 0.0
 Identities = 499/653 (76%), Positives = 558/653 (85%), Gaps = 2/653 (0%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + L+ + ++ ++     +  WAEAVKTACYVINRSPSTAIDLKTPMEMW GK  DYS LH
Sbjct: 590  RTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLH 649

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE++L
Sbjct: 650  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENEL 709

Query: 526  Q--EKGDSNTVKENQETTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRER 699
            Q  +K DS +    +ET  V +E   +  DS  +E+V E              RRSTR+ 
Sbjct: 710  QSEQKNDSTS----KETAIVQMEEKSKESDSSEAESVHEEQEPDDVNDGV---RRSTRQT 762

Query: 700  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKL 879
            + P+WQS+YVM S+ AYCL+TE+GEPSTFHEA   SDASQWMTAMHEE+EALH+N+TW+L
Sbjct: 763  QKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWEL 822

Query: 880  VPLPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXX 1059
            V LP GRKAIGNKWVYKIKRD NDQVERYRARLVVKGYAQKEGIDFNEIFSP        
Sbjct: 823  VELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIR 882

Query: 1060 XXXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQ 1239
               AMCA  DLHLEQLDVKTAFLHGELEEEIYMLQPEGF E GKENLVCRL KSLYGLKQ
Sbjct: 883  VVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQ 942

Query: 1240 APRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEM 1419
            APRCWYKRFDSFI+SL+Y+RLSSDHC YYKRFD NDFIILLLYVDDMLV GPNKDR+QE+
Sbjct: 943  APRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQEL 1002

Query: 1420 KAQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPI 1599
            KAQLAREFDMKDLGPANKILGMQIHRDR + KIWLSQKNY RK+LRRFNMQDCKP+STP+
Sbjct: 1003 KAQLAREFDMKDLGPANKILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNMQDCKPISTPL 1062

Query: 1600 PINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGR 1779
            P+NFKLSS M PSNEAER EMSRVPYASAVGSLM+AMICTRPDIAQAVG VSR+MA+PG+
Sbjct: 1063 PVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGK 1122

Query: 1780 EHWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAV 1959
            EHW+ +KR++RYI+GTS VA+C+GGS+ TVRGYVDSDFAGD DKRKSTTGYVFTLAGGAV
Sbjct: 1123 EHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAV 1182

Query: 1960 SWVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            SW+SKLQTVVALSTTEAEYMAATQACKEA+W+QRL+EELGHKQE+I ++CDSQ
Sbjct: 1183 SWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQ 1235



 Score = 62.0 bits (149), Expect(2) = 0.0
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = +3

Query: 3   QIELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTVA 128
           QIELE+ KKIKCLRTDNGGEY   EF +  +QEGI RQFTVA
Sbjct: 535 QIELETRKKIKCLRTDNGGEYIDGEFLAFCKQEGIVRQFTVA 576


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 1026 bits (2654), Expect(2) = 0.0
 Identities = 498/653 (76%), Positives = 557/653 (85%), Gaps = 2/653 (0%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + L+ + ++ ++     +  WAEA KTACYVINRSPSTAIDLKTPMEMW GK  DYS LH
Sbjct: 590  RTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLH 649

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FG PVYVMYN QE+TKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE++L
Sbjct: 650  VFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENEL 709

Query: 526  Q--EKGDSNTVKENQETTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRER 699
            Q  +K DS +    +ET  V +E   +  DS  +E+V E              RRSTR+ 
Sbjct: 710  QSEQKNDSTS----KETAIVQMEEKSKESDSSEAESVHEEQEPDDVNDGV---RRSTRQT 762

Query: 700  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKL 879
            + P+WQS+YVM S+ AYCL+TE+GEPSTFHEA   SDASQWMTAMHEE+EALH+N+TW+L
Sbjct: 763  QKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWEL 822

Query: 880  VPLPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXX 1059
            V LP GRKAIGNKWVYKIKRD NDQVERYRARLVVKGYAQKEGIDFNEIFSP        
Sbjct: 823  VELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIR 882

Query: 1060 XXXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQ 1239
               AMCA  DLHLEQLDVKTAFLHGELEEEIYMLQPEGF E GKENLVCRL KSLYGLKQ
Sbjct: 883  VVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQ 942

Query: 1240 APRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEM 1419
            APRCWYKRFDSFI+SL+YNRLSSDHC YYKRFD NDFIILLLYVDDMLV GPNKDR+QE+
Sbjct: 943  APRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQEL 1002

Query: 1420 KAQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPI 1599
            KAQLAREFDMKDLGPANKILGMQIHRDR +RKIWLSQKNY RK+LRRFNMQDCKP+STP+
Sbjct: 1003 KAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPL 1062

Query: 1600 PINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGR 1779
            P+NFKLSS M PSNEAER EMSRVPYASAVGSLM+AMICTRPDIAQAVG VSR+MA+PG+
Sbjct: 1063 PVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGK 1122

Query: 1780 EHWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAV 1959
            EHW+ +KR++RYI+GTS VA+C+GGS+ TV GYVDSDFAGD DKRKSTTGYVFTLAGGAV
Sbjct: 1123 EHWNAVKRIMRYIKGTSGVAVCFGGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAV 1182

Query: 1960 SWVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            SW+SKLQTVVALSTTEAEYMAATQACKEA+W+QRL+EELGHKQE+I ++CDSQ
Sbjct: 1183 SWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQ 1235



 Score = 62.4 bits (150), Expect(2) = 0.0
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = +3

Query: 3   QIELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTVA 128
           QIELE+ KKIKCLRTDNGGEY   EF +  +QEGI RQFTVA
Sbjct: 535 QIELETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVA 576


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 1021 bits (2639), Expect(2) = 0.0
 Identities = 494/652 (75%), Positives = 555/652 (85%), Gaps = 1/652 (0%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + L+ + ++ ++  +  +  WAEAVKTACYVINRSPST IDLKTPMEMW GK  DYS LH
Sbjct: 590  RTLLERTRAMLKTAEMAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLH 649

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE++L
Sbjct: 650  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENEL 709

Query: 526  Q-EKGDSNTVKENQETTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERK 702
            Q E+ + +T KE   T  + +E   +  DS  +E+V E              RRSTR+ +
Sbjct: 710  QSEQKNDSTFKE---TAILQIEEKSKESDSSEAESVHEEQEPDDVNNGV---RRSTRQTQ 763

Query: 703  PPAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLV 882
             P+WQS+YVM  + AYCL+ E+GEPSTFHEA   SDASQWMTA+HEE+EAL KN+TW+LV
Sbjct: 764  KPSWQSDYVMTGHDAYCLIAEEGEPSTFHEALNGSDASQWMTAIHEEMEALRKNKTWELV 823

Query: 883  PLPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXX 1062
             LP GRKAIGNKWVYKIKRD NDQVERYRARLVVKGYAQKEGIDFNEIFSP         
Sbjct: 824  ELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRV 883

Query: 1063 XXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQA 1242
              AMCA  DLHLEQLDVKTAFLHGELEEEIYMLQPEGF E GKENLVCRL KSLYGLKQA
Sbjct: 884  VLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQA 943

Query: 1243 PRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMK 1422
            PRCWYKRFDSFI+SL+YNRLSSDHC YYKRFD NDFIILLLYVDD+LV GPNKDR+QE+K
Sbjct: 944  PRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDILVVGPNKDRVQELK 1003

Query: 1423 AQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIP 1602
            AQLAREFDMKDLGPANKILGMQIHRDR +RKIWLSQKNY RK+LRRFNMQDCKP+STP+P
Sbjct: 1004 AQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLP 1063

Query: 1603 INFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGRE 1782
            +NFKLSS M PSNEAER EMSRVPYASAVGSLM+AMICTRPDIAQAVG VSR+MA+PG+E
Sbjct: 1064 VNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKE 1123

Query: 1783 HWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVS 1962
            HW+ +KR++RYI+GTS VA+C+GGS+ TVRGYVDSDFAGD DKRKSTTGYVFTL GGAVS
Sbjct: 1124 HWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLTGGAVS 1183

Query: 1963 WVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            W+SKLQTVVALSTTEAEYMAATQACKEA+W+QRL+EELGHKQE+I ++CDSQ
Sbjct: 1184 WLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQ 1235



 Score = 65.5 bits (158), Expect(2) = 0.0
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = +3

Query: 3   QIELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTVA 128
           QIELE+GKKIKCLRTDNGGEY   EF +  +QEGI RQFTVA
Sbjct: 535 QIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVA 576


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 1007 bits (2603), Expect(2) = 0.0
 Identities = 491/652 (75%), Positives = 546/652 (83%), Gaps = 2/652 (0%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + L+ + ++ ++     +  WAEA KTACYVINRSPSTAI LKTPMEMW GK  DYS L 
Sbjct: 590  RTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLR 649

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FG PVYVMYN QERTKLDPKSR+C FLGYAD VKGYRLWDPT  K+ +SRDVIF E++L
Sbjct: 650  VFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENEL 709

Query: 526  Q--EKGDSNTVKENQETTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRER 699
            Q  +K D  T    +ET TV +E   +    ++SEA PEH             RR+TR+ 
Sbjct: 710  QKEQKNDGTT----KETATVEIE---EKSGEENSEAEPEHEEQEPNEVNDAEPRRTTRQI 762

Query: 700  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKL 879
            + P+W SEYVM S+ AYCLL+EDGEPSTFHEA   SDAS WM AM EEIEALH+N TW+L
Sbjct: 763  RKPSWHSEYVMASHDAYCLLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWEL 822

Query: 880  VPLPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXX 1059
            V LP GRKAIGNKWV+KIKRD NDQVERYRARLVVKGYAQKEGIDFNEIFSP        
Sbjct: 823  VELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIR 882

Query: 1060 XXXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQ 1239
               AMCA F+LHLEQLDVKTAFLHGELEEEIYMLQPEGF E  +ENLVCRL KSLYGLKQ
Sbjct: 883  IVLAMCAAFELHLEQLDVKTAFLHGELEEEIYMLQPEGFEEKERENLVCRLTKSLYGLKQ 942

Query: 1240 APRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEM 1419
            APRCWYKRFDSFIMSL YNRLSSDHC YYKRFDD DFIILLLYVDDMLV GPNKDR+QE+
Sbjct: 943  APRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQEL 1002

Query: 1420 KAQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPI 1599
            KAQLAREFDMKDLGPANKILGMQIHRDR +RKIWLSQKNY +K+LRRFNMQD  P+STP+
Sbjct: 1003 KAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPL 1062

Query: 1600 PINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGR 1779
            P+N+KLSSSM PS+EAER EMSRVPYASAVGSLM+AMICTRPDIAQAVG VSR+MA+PG+
Sbjct: 1063 PVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGK 1122

Query: 1780 EHWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAV 1959
            EHW+ +KR+LRYIRGTS  ALC+GGS+FT+RGYVDSDFAGDLDKRKSTTGYVFTLAGGAV
Sbjct: 1123 EHWNAVKRILRYIRGTSGAALCFGGSEFTIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAV 1182

Query: 1960 SWVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDS 2115
            SW+SKLQTVVALSTTEAEYMAATQACKEA+W QRLLEELGHKQ+KI ++CDS
Sbjct: 1183 SWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLLEELGHKQQKITVYCDS 1234



 Score = 65.1 bits (157), Expect(2) = 0.0
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   QIELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTVA 128
           Q+ELE+GK+IKCLRTDNGGEYT  +F +  +QEGI RQFTVA
Sbjct: 535 QVELETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVA 576


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  986 bits (2548), Expect(2) = 0.0
 Identities = 484/652 (74%), Positives = 537/652 (82%), Gaps = 1/652 (0%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + L+ + ++ +      +  WAEAV TACY++NR+PSTAI+LKTPMEMWTGK  DYS LH
Sbjct: 580  RTLLERTRAMLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLH 639

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FGS VY MYN QE TKLDPKSRKC FLGYADGVKGYRLWDPT HKVVISRDVIF ED+L
Sbjct: 640  IFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRL 699

Query: 526  QE-KGDSNTVKENQETTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERK 702
            Q  + D +T KE  ETT + VE   + +   SSEA P H             R+S RE++
Sbjct: 700  QRGEVDDSTEKEKPETTQIQVEEEFEQD---SSEAEPAHEEPEPESSGAPTTRQSDREKR 756

Query: 703  PPAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLV 882
             P W S+YVME NVAYCLLTEDGEPSTF EA  SSD SQW  AM EEIEALHKN TW LV
Sbjct: 757  RPTWHSDYVMEGNVAYCLLTEDGEPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLV 816

Query: 883  PLPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXX 1062
            PLP GRK IGNKWV+KIKR+ +DQVERYRARLVVKGYAQKEGIDFNEIFSP         
Sbjct: 817  PLPQGRKPIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRV 876

Query: 1063 XXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQA 1242
              AMCATF+LHLEQLDVKTAFLHG+LEEEIYMLQPEGF +   +NLVCRLNKSLYGLKQA
Sbjct: 877  VLAMCATFNLHLEQLDVKTAFLHGDLEEEIYMLQPEGFEDKENQNLVCRLNKSLYGLKQA 936

Query: 1243 PRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMK 1422
            PRCWYKRFDSFIM L YNRL++D CAY+KRF  ++F+ILLLYVDDMLVAGPNKD I E+K
Sbjct: 937  PRCWYKRFDSFIMCLGYNRLNADPCAYFKRFGKDNFVILLLYVDDMLVAGPNKDHIDELK 996

Query: 1423 AQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIP 1602
            AQLAREF+MKDLGPANKILGMQIHRDR NRKIWLSQKNY +KIL RF+MQDCK +STP+P
Sbjct: 997  AQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLP 1056

Query: 1603 INFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGRE 1782
            IN K+SSSM PSNE  R EMSRVPYASAVGSLMFAMICTRPDIAQAVG VSRYMANPGRE
Sbjct: 1057 INLKVSSSMSPSNEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGRE 1116

Query: 1783 HWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVS 1962
            HW+ +KR+LRYI+GTSDVALCYGGSDF + GYVDSD+AGDLDK KSTTGYVF +AGGAVS
Sbjct: 1117 HWNCVKRILRYIKGTSDVALCYGGSDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVS 1176

Query: 1963 WVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            WVSKLQ VVA STTEAEY+AATQA KEA+W++ LLEELGHKQE + LFCDSQ
Sbjct: 1177 WVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQ 1228



 Score = 69.3 bits (168), Expect(2) = 0.0
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   QIELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTVA 128
           ++EL+SGKKIKC RTDNGGEYTS+EF+   ++EGIKRQFTVA
Sbjct: 525 RVELDSGKKIKCFRTDNGGEYTSEEFDDFCKKEGIKRQFTVA 566


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  669 bits (1726), Expect(2) = 0.0
 Identities = 335/675 (49%), Positives = 448/675 (66%), Gaps = 24/675 (3%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + +V K +S +   K  +  W EAV+TACY+INRSPS  +  + P  +WT K   YS L 
Sbjct: 590  RTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLK 649

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 525
             FG   +     ++RTKLD KS  CIF+GY D   GYRLWDP   KV+ SRDV+F E ++
Sbjct: 650  VFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEV 709

Query: 526  QEKGD-------------------SNTVKENQETTTVIVENNLQ-----NEDSKSSEAVP 633
            +   D                   SN     + TT  + E   Q      +  +  E V 
Sbjct: 710  RTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVE 769

Query: 634  EHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATKSSDA 813
            E              RRS R R       E     +  Y L+++D EP +  E     + 
Sbjct: 770  EVEHPTQGEEQHQPLRRSERPRV------ESRRYPSTEYVLISDDREPESLKEVLSHPEK 823

Query: 814  SQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWVYKIKRDSNDQVERYRARLVVKGY 993
            +Q M AM EE+E+L KN T+KLV LP G++ +  KWV+K+K+D + ++ RY+ARLVVKG+
Sbjct: 824  NQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGF 883

Query: 994  AQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEG 1173
             QK+GIDF+EIFSP           ++ A+ DL +EQLDVKTAFLHG+LEEEIYM QPEG
Sbjct: 884  EQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEG 943

Query: 1174 FAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFI 1353
            F   GK+++VC+LNKSLYGLKQAPR WY +FDSF+ S  Y +  SD C Y+KRF +N+FI
Sbjct: 944  FEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFI 1003

Query: 1354 ILLLYVDDMLVAGPNKDRIQEMKAQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQK 1533
            ILLLYVDDML+ G +K  I ++K  L++ FDMKDLGPA +ILGM+I R+R +RK+WLSQ+
Sbjct: 1004 ILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQE 1063

Query: 1534 NYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMI 1713
             Y  ++L RFNM++ KPVSTP+  + KLS  MCP+   E+  M++VPY+SAVGSLM+AM+
Sbjct: 1064 KYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMV 1123

Query: 1714 CTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDF 1893
            CTRPDIA AVG VSR++ NPG+EHW+ +K +LRY+RGT+   LC+GGSD  ++GY D+D 
Sbjct: 1124 CTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADM 1183

Query: 1894 AGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEE 2073
            AGD+D RKS+TGY+FT +GGA+SW SKLQ  VALSTTEAEY+AAT+  KE +W++R L+E
Sbjct: 1184 AGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQE 1243

Query: 2074 LGHKQEKIVLFCDSQ 2118
            LG  Q++ V++CDSQ
Sbjct: 1244 LGLHQKEYVVYCDSQ 1258



 Score = 47.8 bits (112), Expect(2) = 0.0
 Identities = 22/40 (55%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E E+G+K+K LR+DNGGEYTS EFE      GI+ + TV
Sbjct: 536 VERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTV 575


>emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera]
          Length = 1261

 Score =  640 bits (1652), Expect(3) = 0.0
 Identities = 323/638 (50%), Positives = 434/638 (68%), Gaps = 7/638 (1%)
 Frame = +1

Query: 226  WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLHTFGSPVYVMYNDQERTKLDP 405
            WA+AV TA Y+INR PS  ++ + P E+W+GK   +S L  FG   YV  +   R+KLD 
Sbjct: 564  WADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDA 623

Query: 406  KSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKLQEKGDSNTVK------ENQE 567
            KS+ C F+GY D   GYR WD    K++ SR+VIF E  + +  D +TV       + ++
Sbjct: 624  KSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYK--DRSTVTSDVTEIDQKK 681

Query: 568  TTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXX-RRSTRERKPPAWQSEYVMESNV 744
            +  V ++   ++   K  E   E+              RRS+R  +PP   S  +     
Sbjct: 682  SEFVNLDELTESTVQKGGEEDKENVNSQVDLSTPIVEVRRSSRNTRPPQRYSPVLN---- 737

Query: 745  AYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWV 924
             Y LLT+ GEP  + EA +  ++S+W  AM +E+++L  NQTW+L  LP G+KA+ NKWV
Sbjct: 738  -YLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLLGNQTWZLTELPVGKKALHNKWV 796

Query: 925  YKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQ 1104
            Y+IK + +D  +RY+ARLVVKG+ QKEGID+ EIFSP            M A  +LHLEQ
Sbjct: 797  YRIKNE-HDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQ 855

Query: 1105 LDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMS 1284
            LDVKTAFLHG+LEE++YM+QPEGF   G+ENLVC+L KSLYGLKQAPR WYK+FD+F+  
Sbjct: 856  LDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHR 915

Query: 1285 LEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLAREFDMKDLGP 1464
            + + R  +DHC Y+K FD N +IILLLYVDDML+AG + ++I  +K QL+++F MKDLG 
Sbjct: 916  IGFKRCEADHCCYFKSFD-NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGA 974

Query: 1465 ANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPSNE 1644
            A +ILGM+I RD+ N  + LSQ  Y +K+L RFNM + KPVSTP+  +FKLS    P  E
Sbjct: 975  AKQILGMRIIRDKANGTLKLSQSEYVKKVLXRFNMNEAKPVSTPLGSHFKLSKEQSPKTE 1034

Query: 1645 AERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYIRG 1824
             ER  MS+VPYASA+GSLM+AM+CTR DIA AVG VSR+M+ PG++HW+ +K +LRY++G
Sbjct: 1035 EERDXMSKVPYASAIGSLMYAMVCTRLDIAHAVGVVSRFMSXPGKQHWEAVKWILRYLKG 1094

Query: 1825 TSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTT 2004
            + D  LC+ G+   ++GYVD+DFAGD+D RKSTTG+VFTL G A+SW S LQ +V LSTT
Sbjct: 1095 SLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTT 1154

Query: 2005 EAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            EAEY+AAT+A KE +W+   L+ELG KQE  +L  DSQ
Sbjct: 1155 EAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQ 1192



 Score = 52.0 bits (123), Expect(3) = 0.0
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +2

Query: 101 RHQKTVHGGDTPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           R +KT+ G  TPQQNGVAERMNRTL ER R+M   A LPKT
Sbjct: 524 RMEKTIPG--TPQQNGVAERMNRTLNERARSMRLHAGLPKT 562



 Score = 42.7 bits (99), Expect(3) = 0.0
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E E+G K+KCLR+DNGGEY    F      +GI+ + T+
Sbjct: 490 VETETGLKVKCLRSDNGGEYIDGGFSEYCXAQGIRMEKTI 529


>emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera]
          Length = 1298

 Score =  636 bits (1640), Expect(3) = 0.0
 Identities = 326/647 (50%), Positives = 434/647 (67%), Gaps = 16/647 (2%)
 Frame = +1

Query: 226  WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLHTFGSPVYVMYNDQERTKLDP 405
            WA+AV TA Y+INR PS  ++ + P E+W+GK   +S L  FG   YV  +   R+KLD 
Sbjct: 601  WADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDA 660

Query: 406  KSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAE-----DKL----------QEKGD 540
            KS+ C F+GY D   GYR WD    K++ SR+VIF E     D+L          Q+K +
Sbjct: 661  KSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRLTVTSXVTEIDQKKSE 720

Query: 541  SNTVKENQETTTVIV-ENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQ 717
               + E  E+T     E + +N +SK     P               RRS+R  +PP   
Sbjct: 721  FVNLDELTESTVQKRGEEDKENVNSKVDLRTP-----------VVEVRRSSRNIRPPQRY 769

Query: 718  SEYVMESNVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHG 897
            S  +      Y LLT+ GEP  ++EA +  ++S+W  AM +E+++L  NQTW+L  LP G
Sbjct: 770  SPVLN-----YLLLTDGGEPECYNEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVG 824

Query: 898  RKAIGNKWVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMC 1077
            +KA+ NKWVY+IK + +D  +RY+ARLVVKG+ QKEGID+ EIFSP            M 
Sbjct: 825  KKALHNKWVYRIKNE-HDGSKRYKARLVVKGFQQKEGIDYIEIFSPVVKMSTIRLVLGMV 883

Query: 1078 ATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWY 1257
            A  +LHLEQLDVKT FLHG+LEE++YM+QPEGF   G+ENLVC+L KSLYGLKQAPR WY
Sbjct: 884  AVENLHLEQLDVKTTFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWY 943

Query: 1258 KRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLAR 1437
            K+FD+F+  + + R  +DHC Y K FD N +IILLLYVDDML+AG + ++I  +K QL++
Sbjct: 944  KKFDNFMHRIGFKRCEADHCCYVKSFD-NSYIILLLYVDDMLIAGSDIEKINNLKKQLSK 1002

Query: 1438 EFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKL 1617
            +F MKDLG A +ILGM+I RD+ N  + LSQ  Y +K+L RFNM + KPVSTP+  +FKL
Sbjct: 1003 QFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKL 1062

Query: 1618 SSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTL 1797
            S    P  E ER  MS+VPYAS +GSLM+AM+CTRPDIA AVG VSR+M+ PG+++W+ +
Sbjct: 1063 SKEQSPKTEEERDHMSKVPYASTIGSLMYAMVCTRPDIAHAVGIVSRFMSRPGKQNWEAV 1122

Query: 1798 KRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKL 1977
            K +LRY++G+ D  LC+ G+   ++GYVD+DFAGD+D RKSTTG+VFTL G A+SW S L
Sbjct: 1123 KWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNL 1182

Query: 1978 QTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            Q +V LSTTEAEY+AAT+A KE +W+   L+ELG KQE  +L  DSQ
Sbjct: 1183 QKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQ 1229



 Score = 52.0 bits (123), Expect(3) = 0.0
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +2

Query: 101 RHQKTVHGGDTPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           R +KT+ G  TPQQNGVAERMNRTL ER R+M   A LPKT
Sbjct: 561 RMEKTIPG--TPQQNGVAERMNRTLNERARSMRLHAGLPKT 599



 Score = 42.7 bits (99), Expect(3) = 0.0
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E E+G K+KCLR+DNGGEY    F      +GI+ + T+
Sbjct: 527 VETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTI 566


>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
          Length = 1286

 Score =  633 bits (1633), Expect(3) = 0.0
 Identities = 321/640 (50%), Positives = 428/640 (66%), Gaps = 9/640 (1%)
 Frame = +1

Query: 226  WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLHTFGSPVYVMYNDQERTKLDP 405
            WA+AV TA Y+INR PS  ++ + P E+W+GK   +S L  FG   YV  +   R+KLD 
Sbjct: 589  WADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCISYVYIDSDARSKLDA 648

Query: 406  KSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKLQEKGDSNTVKENQE------ 567
            KS+ C F+ Y D   GYR WD    K++ SR+VIF E ++  K  S+ V +  E      
Sbjct: 649  KSKICFFIDYGDEKFGYRFWDKQNRKIIRSRNVIFNE-QVMYKDRSSVVSDVTEIDQKKS 707

Query: 568  ---TTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMES 738
                   + E+ +Q    +  E V                RRS+R  +PP   S  +   
Sbjct: 708  EFVNLDELTESTVQKGGEEDKENVNSQVDLSTXVVEV---RRSSRNXRPPQRYSPVLN-- 762

Query: 739  NVAYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNK 918
               Y LLT+ G P  + EA +  ++S+W  AM +E+++L  NQTW+L  LP G+KA+ NK
Sbjct: 763  ---YLLLTDGGXPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNK 819

Query: 919  WVYKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHL 1098
            WVY IK + +D  +RY+ RLVVKG+ Q EGID+ EIFSP            M A  +LHL
Sbjct: 820  WVYXIKNE-HDGSKRYKXRLVVKGFQQXEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHL 878

Query: 1099 EQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFI 1278
            EQLDVKTAFLHG+LEE++YM+QPEGF   G+ENLVC+L KSLYGLKQAPR WYK+FD+F+
Sbjct: 879  EQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFM 938

Query: 1279 MSLEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLAREFDMKDL 1458
              + + R  +DHC Y+K FD N +IILLLYVDDML+AG + ++I  +K QL+++F MKDL
Sbjct: 939  HRIGFKRCEADHCCYFKSFD-NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDL 997

Query: 1459 GPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPS 1638
            G A +ILGM+I RD+ N  + LSQ  Y +K+L RFNM + KPVSTP+  +FKLS    P 
Sbjct: 998  GAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPK 1057

Query: 1639 NEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYI 1818
             E +R  MS+VPYASA+GSLM+AM+CTRPDIA AVG VSR+M+ PG++HW+ +K +LRY+
Sbjct: 1058 TEEKRDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEVVKWILRYL 1117

Query: 1819 RGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALS 1998
            +G+ D  LC+ G+   ++GYVD+DFAGD+D RKSTTG+VFTL G A+SW S LQ +V LS
Sbjct: 1118 KGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWASNLQKIVTLS 1177

Query: 1999 TTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            TTEAEY+AAT+A KE +W+   L+ELG KQE  +L  DSQ
Sbjct: 1178 TTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQ 1217



 Score = 52.0 bits (123), Expect(3) = 0.0
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +2

Query: 101 RHQKTVHGGDTPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           R +KT+ G  TPQQNGVAERMNRTL ER R+M   A LPKT
Sbjct: 549 RMEKTIPG--TPQQNGVAERMNRTLNERARSMRLHAGLPKT 587



 Score = 42.7 bits (99), Expect(3) = 0.0
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E E+G K+KCLR+DNGGEY    F      +GI+ + T+
Sbjct: 515 VETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTI 554


>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
          Length = 1279

 Score =  631 bits (1627), Expect(3) = 0.0
 Identities = 320/638 (50%), Positives = 431/638 (67%), Gaps = 7/638 (1%)
 Frame = +1

Query: 226  WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLHTFGSPVYVMYNDQERTKLDP 405
            WA+AV TA Y+INR PS  ++ + P E+W+GK   +S L  FG   Y+  +   R+KLD 
Sbjct: 582  WADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYIHIDSDARSKLDA 641

Query: 406  KSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKLQEKGDSNTVK------ENQE 567
            KS+ C F+GY D   GYR WD    K++ SR+VIF E  + +  D +TV       + ++
Sbjct: 642  KSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYK--DRSTVTSDVTEIDQKK 699

Query: 568  TTTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXX-RRSTRERKPPAWQSEYVMESNV 744
            +  V ++   ++   K  E   E+              RRS+R  +PP   S  +     
Sbjct: 700  SEFVNLDELTESTVQKGGEEXKENVNSQVDLSTPXXEVRRSSRNXRPPQRYSPVLN---- 755

Query: 745  AYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWV 924
             Y LLT+ GEP  + E  +  ++S+   AM +E+++L  NQTW+L  LP G+KA+ NKWV
Sbjct: 756  -YLLLTBGGEPECYBEXLQDENSSKXELAMKDEMDSLLGNQTWZLTELPVGKKALHNKWV 814

Query: 925  YKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQ 1104
            Y+IK + +D  +RY+ARLVVKG+ QKEGID+ EIFSP            M A  +LHLEQ
Sbjct: 815  YRIKNE-HDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLILGMVAAENLHLEQ 873

Query: 1105 LDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMS 1284
            LDVKTAFLH +LEE++YM+QPEGF   G+ENLVC+L KSLY LKQAPR WYK+FD+F+  
Sbjct: 874  LDVKTAFLHSDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYDLKQAPRQWYKKFDNFMHR 933

Query: 1285 LEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLAREFDMKDLGP 1464
            + + R  +DHC Y K FD N +IILLLYVDDML+ G + ++I  +K QL+++F MKDLG 
Sbjct: 934  IGFKRCEADHCCYVKSFD-NSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGA 992

Query: 1465 ANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPSNE 1644
            A +ILGM+I RD+ N  + LSQ  Y +K+L RFNM + KPVSTP+  +FKLS    P  E
Sbjct: 993  AKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTE 1052

Query: 1645 AERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYIRG 1824
             ER  MS+VPYASA+GSLM+AM+CTRPDIA AVG VSR+M+ PG++HW+ +K +LRY++G
Sbjct: 1053 EERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKG 1112

Query: 1825 TSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTT 2004
            + D  LC+ G+   ++GYVD+DFAGD+D RKSTTG+VFTL G A+SW S LQ +V LSTT
Sbjct: 1113 SLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWASNLQKIVTLSTT 1172

Query: 2005 EAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            EAEY+AAT+A KE +W+   L+ELG KQE  +L  DSQ
Sbjct: 1173 EAEYVAATEARKEMIWLHGFLDELGKKQEMGILHSDSQ 1210



 Score = 52.0 bits (123), Expect(3) = 0.0
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +2

Query: 101 RHQKTVHGGDTPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           R +KT+ G  TPQQNGVAERMNRTL ER R+M   A LPKT
Sbjct: 542 RMEKTIPG--TPQQNGVAERMNRTLNERARSMRLHAGLPKT 580



 Score = 42.7 bits (99), Expect(3) = 0.0
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E E+G K+KCLR+DNGGEY    F      +GI+ + T+
Sbjct: 508 VETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTI 547


>emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]
          Length = 1287

 Score =  629 bits (1622), Expect(3) = 0.0
 Identities = 320/642 (49%), Positives = 427/642 (66%), Gaps = 11/642 (1%)
 Frame = +1

Query: 226  WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLHTFGSPVYVMYNDQERTKLDP 405
            WA+AV TA Y+INR PS  ++ + P E+W+GK   +S L  FG   YV  +   R+KLD 
Sbjct: 584  WADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCISYVHIDSDARSKLDA 643

Query: 406  KSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKLQEKGDSN----TVKENQETT 573
            KS+ C F+GY D   GYR WD    K++ SR+VIF E  + +   S     T  + +++ 
Sbjct: 644  KSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSSVVSDVTEIDQKKSE 703

Query: 574  TVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXX-RRSTRERKPPAWQSEYVMESNVAY 750
             V ++   ++   K  E   E+              RRS+R  +PP   S  +      Y
Sbjct: 704  FVNLDELTKSTVQKGGEEDKENVNSQVDLSTPVVEVRRSSRNTRPPQRYSPVLN-----Y 758

Query: 751  CLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWVYK 930
             LLT+ GEP  + EA +  ++S+W  AM +E+++L  NQTW+L  LP G+KA+ NKWVY+
Sbjct: 759  LLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYR 818

Query: 931  IKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQLD 1110
            IK + +D  +RY+ARLVVKG+ QKEGID+ EIFSP            M A  +LHLEQLD
Sbjct: 819  IKNE-HDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLD 877

Query: 1111 VKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLE 1290
            VKTAFLHG+LEE++YM+QPEGF   G+ENLVC+L KSLYGLKQAPR WYK+FD+ +  + 
Sbjct: 878  VKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNXMHRIG 937

Query: 1291 YNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGP------NKDRIQEMKAQLAREFDMK 1452
            + R  +DHC Y K FD N +IILLLYVDDML+ G       N  +I  +K QL+++F MK
Sbjct: 938  FKRCEADHCCYVKSFD-NSYIILLLYVDDMLIVGSDIEKINNLKKINNLKKQLSKQFAMK 996

Query: 1453 DLGPANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMC 1632
            DLG A +ILGM+I RD+ N  + LSQ  Y +K+L RFNM + KPV TP+  +FKLS    
Sbjct: 997  DLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVXTPLGSHFKLSKEQS 1056

Query: 1633 PSNEAERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLR 1812
            P  E ER  MS+VPYASA+GSLM+AM+CTRPDIA AVG VSR+M+ PG++HW+ +K +LR
Sbjct: 1057 PKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILR 1116

Query: 1813 YIRGTSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVA 1992
            Y++G+ D  LC+ G+   ++GYVD+DFAGD+D RKSTTG+VFTL G  +SW S LQ +V 
Sbjct: 1117 YLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTXISWTSNLQKIVT 1176

Query: 1993 LSTTEAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            LSTTEAEY+AAT+A KE +W+   L+ELG KQE  +L  DSQ
Sbjct: 1177 LSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQ 1218



 Score = 52.0 bits (123), Expect(3) = 0.0
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +2

Query: 101 RHQKTVHGGDTPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           R +KT+ G  TPQQNGVAERMNRTL ER R+M   A LPKT
Sbjct: 544 RMEKTIPG--TPQQNGVAERMNRTLNERARSMRLHAGLPKT 582



 Score = 40.4 bits (93), Expect(3) = 0.0
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E E+  K+KCLR+DNGGEY    F      +GI+ + T+
Sbjct: 510 VETETSLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTI 549


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  647 bits (1669), Expect(2) = 0.0
 Identities = 327/687 (47%), Positives = 449/687 (65%), Gaps = 30/687 (4%)
 Frame = +1

Query: 148  SGRANEQN--LVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGK 321
            +G A   N  L+ + +  + + K  +  W EA+ TA YV+N SP   +  K P ++W G+
Sbjct: 579  NGLAERMNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGR 638

Query: 322  HADYSRLHTFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRD 501
               Y +L  FG   YV     ER+KLD K+R+C+F+GY   + GY+ +DP   K+V SRD
Sbjct: 639  DISYDQLRVFGCKAYVHVPKDERSKLDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRD 698

Query: 502  VIFAEDKLQEKGDS-----------------------NTVKENQ-ETTTVIVENNLQ--- 600
            V+F ED+  E  D                        + V++NQ E   +  E+ L    
Sbjct: 699  VVFVEDQTIEDIDKVEKSTDDSAEFELPPTVVPRQVGDDVQDNQPEAPGLPNEDELADTE 758

Query: 601  -NEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMESNVAYCLLTEDGEP 777
             NED+   +A  E               RS R  +     S +       Y LLT+ GEP
Sbjct: 759  GNEDNGDDDADEEDQPQPPILNNPPYHTRSGRVVQQSTRYSPH------EYVLLTDGGEP 812

Query: 778  STFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWVYKIKRDSNDQV 957
             +F EA       +W+ AM +EI++LH+N+T++LV LP G++A+ NKWV+K+K D ++ +
Sbjct: 813  DSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKMKHDEHNSL 872

Query: 958  ERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQLDVKTAFLHGE 1137
             R++ARLVVKG+ Q++GIDF+EIFSP            + A+ +L +EQ+DVKTAFLHG+
Sbjct: 873  PRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQMDVKTAFLHGD 932

Query: 1138 LEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLEYNRLSSDHC 1317
            LEEEIYM QP+GF + GKE+ VCRL KSLYGLKQAPR WYK+F+S +    Y + +SDHC
Sbjct: 933  LEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKTTSDHC 992

Query: 1318 AYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLAREFDMKDLGPANKILGMQIHR 1497
             + ++F D+DFIILLLYVDDML+ G N  RI  +K QL++ F MKDLGPA +ILGM+I R
Sbjct: 993  VFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPAKQILGMRIMR 1052

Query: 1498 DRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPSNEAERREMSRVPY 1677
            DR  +K+WLSQ+ Y  K+L+RFNM+  K VS P+  +F+LS+   PS + ERR+M R+PY
Sbjct: 1053 DREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPY 1112

Query: 1678 ASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYIRGTSDVALCYGGS 1857
            ASAVGSLM+AM+CTRPDIA AVG VSR+++NPG+EHWD +K +LRY+RGTS + LC+G  
Sbjct: 1113 ASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGED 1172

Query: 1858 DFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQAC 2037
            +  + GY D+D AGD+D RKST+GY+   +GGAVSW SKLQ  VALSTTEAE++AAT+AC
Sbjct: 1173 NPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEAC 1232

Query: 2038 KEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            KE +W+++ L ELG  Q+   LFCDSQ
Sbjct: 1233 KELIWMKKFLTELGFSQDGYQLFCDSQ 1259



 Score = 48.9 bits (115), Expect(2) = 0.0
 Identities = 21/39 (53%), Positives = 31/39 (79%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFT 122
           +E E+GKK+KC+RTDNGGEY   +F++  ++ GI+ QFT
Sbjct: 534 VERETGKKLKCIRTDNGGEY-QGQFDAYCKEHGIRHQFT 571


>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
          Length = 1222

 Score =  644 bits (1661), Expect(2) = 0.0
 Identities = 323/631 (51%), Positives = 429/631 (67%)
 Frame = +1

Query: 226  WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLHTFGSPVYVMYNDQERTKLDP 405
            WA+AV TA Y+INR PS  ++ + P E+W+GK   +S L  FG   YV  +   R+KLD 
Sbjct: 551  WADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCXSYVHIDSDARSKLDA 610

Query: 406  KSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKLQEKGDSNTVKENQETTTVIV 585
            KS+ C F+GY D   GYR WD    K++ SR+VIF E  + +  DS   K  +E      
Sbjct: 611  KSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYK--DSTVQKGGEED----- 663

Query: 586  ENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMESNVAYCLLTE 765
            + N+ ++   S+  V                RRS+R  +PP   S  +      Y LLT+
Sbjct: 664  KENVNSQVDLSTPVVE--------------VRRSSRNTRPPQRYSPVLN-----YLLLTD 704

Query: 766  DGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWVYKIKRDS 945
             GEP  + EA +  ++S+W  AM +E+++L  NQTW+L  LP G+KA+ NKWVY+IK + 
Sbjct: 705  GGEPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYRIKNE- 763

Query: 946  NDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQLDVKTAF 1125
            +D  +RY+ARLVVKG+ QKEGID+ EIFSP            M A  +LHLEQLDVKTAF
Sbjct: 764  HDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAF 823

Query: 1126 LHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLEYNRLS 1305
            LHG+LEE++YM+QPEGF   G+ENLVC+L KSLYGLKQAPR WYK+FD+F+  + + R  
Sbjct: 824  LHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCE 883

Query: 1306 SDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLAREFDMKDLGPANKILGM 1485
            +DHC Y K FD N +IILLLYVDDML+ G + ++I  +K QL+++F MKDLG A +ILGM
Sbjct: 884  ADHCCYVKSFD-NSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGM 942

Query: 1486 QIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPSNEAERREMS 1665
            +I RD+ N  + LSQ  Y +K+L RFNM + KPVSTP+  +FKLS    P  E ER  MS
Sbjct: 943  RIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMS 1002

Query: 1666 RVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYIRGTSDVALC 1845
            +VPYASA+GSLM+AM+CTRPDIA AVG VSR+M+ PG++HW+ +K +LRY++G+ D  LC
Sbjct: 1003 KVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLC 1062

Query: 1846 YGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAA 2025
            + G+   ++GYVD+DFAGD+D RKSTTG+VFTL G A+SW S LQ +V LSTTEAEY+AA
Sbjct: 1063 FTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAA 1122

Query: 2026 TQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            T+A KE +W+   L+ELG KQE  +L  DSQ
Sbjct: 1123 TEAGKEMIWLHGFLDELGKKQEMGILHSDSQ 1153



 Score = 52.0 bits (123), Expect(2) = 0.0
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +2

Query: 101 RHQKTVHGGDTPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           R +KT+ G  TPQQNGVAERMNRTL ER R+M   A LPKT
Sbjct: 511 RMEKTIPG--TPQQNGVAERMNRTLNERARSMRLHAGLPKT 549


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  649 bits (1675), Expect(2) = 0.0
 Identities = 327/678 (48%), Positives = 444/678 (65%), Gaps = 29/678 (4%)
 Frame = +1

Query: 148  SGRANEQN--LVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGK 321
            +G A   N  ++ + +  +++ K     WAEAV TA +VIN SP  A+  + P ++W GK
Sbjct: 577  NGLAERMNRTIMERVRCMLDDAKLPSSFWAEAVSTAVHVINLSPVIALKNEVPDKVWCGK 636

Query: 322  HADYSRLHTFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRD 501
               Y  L  FG   +V     ER+KLD K+R+CIF+GY     GYRL+DP   K+V SRD
Sbjct: 637  DVSYDHLRVFGCKAFVHVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRD 696

Query: 502  VIFAEDKLQEKGDSNTVKENQETTTVI---------------VENNLQNED--------- 609
            V+F E++  E  D     E++++ +++               V+ N+QN D         
Sbjct: 697  VVFFENQTIEDIDKVKQPESRDSGSLVDIEPVSRRYTDDVDEVQENVQNGDPVPDYQGDT 756

Query: 610  ---SKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMESNVAYCLLTEDGEPS 780
                  ++ V                RRS RER+P    + Y   S   Y LLT+ GEP 
Sbjct: 757  VDVDGHADDVVHQEQEVPSQVPVDLPRRSDRERRP---STRY---SPSQYVLLTDGGEPE 810

Query: 781  TFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWVYKIKRDSNDQVE 960
            ++ EA +S    QW  AM EE+ +L+ N T++LV  P  RKA+ N+WVY++K +    V 
Sbjct: 811  SYEEAMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRVKHEEGTSVP 870

Query: 961  RYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQLDVKTAFLHGEL 1140
            R++ARLVVKG++QK+GIDF+EIFSP            + A  D+ +EQ+DVKTAFLHG+L
Sbjct: 871  RFKARLVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDL 930

Query: 1141 EEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLEYNRLSSDHCA 1320
            +EEIYM QPEGF   GKE+ VCRL KSLYGLKQAPR WYK+F S +    Y + SSDHC 
Sbjct: 931  DEEIYMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCV 990

Query: 1321 YYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLAREFDMKDLGPANKILGMQIHRD 1500
            +  R+ D+DF+ILLLYVDDML+ G N  RIQE+K +L++ F MKD+GPA +ILGM+I RD
Sbjct: 991  FVNRYSDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRD 1050

Query: 1501 RNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPSNEAERREMSRVPYA 1680
            R N+K+WLSQ+ Y  K+L RF+M + KPVSTP+ ++FKL    CPS+E E+ EM RVPY+
Sbjct: 1051 RQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYS 1110

Query: 1681 SAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYIRGTSDVALCYGGSD 1860
            SAVGSLM+AM+CTRPDIA AVG VSR+++NPGREHWD +K +LRY+RGTS ++LC+G   
Sbjct: 1111 SAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGK 1170

Query: 1861 FTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQACK 2040
              + GY DSD AGD+D RKST+GY+ T AGGAVSW S+LQ  V LSTTEAE++A+ +A K
Sbjct: 1171 PILTGYTDSDMAGDIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLSTTEAEFIASVEASK 1230

Query: 2041 EAVWIQRLLEELGHKQEK 2094
            E +W+++ L+ELG  Q++
Sbjct: 1231 EMLWMKKFLQELGFVQDR 1248



 Score = 41.6 bits (96), Expect(2) = 0.0
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFT 122
           +E ++GKK+KC+RTDNGGEY    F+   ++ GI+ Q T
Sbjct: 532 VERQTGKKLKCIRTDNGGEYCG-PFDEYCRRYGIRHQKT 569


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  649 bits (1673), Expect(2) = 0.0
 Identities = 343/670 (51%), Positives = 449/670 (67%), Gaps = 19/670 (2%)
 Frame = +1

Query: 166  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLH 345
            + ++ K +  + N    +  WAEAV TACY+INRSPS AID KTP+E+W+G  A+YS L 
Sbjct: 808  RTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLR 867

Query: 346  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAED-K 522
             FG   Y   ++    KL+P++ KCIFLGY  GVKGY+LW P T KVVISR+V+F E   
Sbjct: 868  VFGCTAYAHVDNG---KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVM 924

Query: 523  LQEKGDSNTVKENQETTTVIVENNL------QNEDSKSSEAVPEHXXXXXXXXXXXXXRR 684
            L +K  +N   E+QE  +V VE+ +      + ED   ++  P               R 
Sbjct: 925  LHDKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRS 984

Query: 685  STRER-----KPPAWQSEYVMESN-VAYCL-----LTEDGEPSTFHEATKSSDASQWMTA 831
              ++R     KPP     Y+ E+N VAY L     +  + EPST+ EA  S D ++W+TA
Sbjct: 985  IAKDRPKRNIKPP---QRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITA 1041

Query: 832  MHEEIEALHKNQTWKLVPLPHGRKAIGNKWVYKIKRD-SNDQVERYRARLVVKGYAQKEG 1008
            MH+E+E+L KN TW+LV LP  +K I  KW++K K   S+    RY+ARL+ KGY+Q  G
Sbjct: 1042 MHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPG 1101

Query: 1009 IDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETG 1188
            IDFN++FSP           ++ A  D  LEQ+DVKTAFLHGELEE+IYM QP+GF   G
Sbjct: 1102 IDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPG 1161

Query: 1189 KENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLEYNRLSSDHCAYYKRFDDNDFIILLLY 1368
            KENLVCRL KSLYGLKQ+PR WYKRFDSF++S ++ R + D C Y K  D +  I LLLY
Sbjct: 1162 KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSA-IYLLLY 1220

Query: 1369 VDDMLVAGPNKDRIQEMKAQLAREFDMKDLGPANKILGMQIHRDRNNRKIWLSQKNYFRK 1548
            VDDML+A  +K  I ++KAQL+ EF+MKDLG A KILGM+I R R++ K++LSQK Y  K
Sbjct: 1221 VDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEK 1280

Query: 1549 ILRRFNMQDCKPVSTPIPINFKLSSSMCPSNEAERREMSRVPYASAVGSLMFAMICTRPD 1728
            +LRRFNM D KPVSTP+  +F+LSS +CP ++ +   MSRVPY+SAVGSLM+AM+C+RPD
Sbjct: 1281 VLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVCSRPD 1340

Query: 1729 IAQAVGAVSRYMANPGREHWDTLKRVLRYIRGTSDVALCYGGSDFTVRGYVDSDFAGDLD 1908
            ++ A+  VSRYMANPG+EHW  ++ + RY+RGTS   L +G S   + GYVDSDFAGDLD
Sbjct: 1341 LSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRDGLVGYVDSDFAGDLD 1400

Query: 1909 KRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQACKEAVWIQRLLEELGHKQ 2088
            + +S  GYVFT+ G AVSW + LQ  VALSTTEAEYMA ++ACKEA+W++ L   L    
Sbjct: 1401 RGRSLAGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTVLCAVT 1460

Query: 2089 EKIVLFCDSQ 2118
              I +FCDSQ
Sbjct: 1461 SCINIFCDSQ 1470



 Score = 40.4 bits (93), Expect(2) = 0.0
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E ++ +K+K LRTDNG E+ S  F+S  + EGI R +TV
Sbjct: 754 VERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTV 793


>emb|CAN61435.1| hypothetical protein VITISV_033767 [Vitis vinifera]
          Length = 1298

 Score =  629 bits (1623), Expect(3) = 0.0
 Identities = 322/638 (50%), Positives = 426/638 (66%), Gaps = 8/638 (1%)
 Frame = +1

Query: 229  AEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLHTFGSPVYVMYNDQERTKLDPK 408
            A+AV TA Y+INR PS  ++ + P E+W+GK   +S L  FG   YV  +    +KLD K
Sbjct: 602  ADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDAXSKLDAK 661

Query: 409  SRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKLQEKGDSNT--VKENQETTTVI 582
            S+ C F+GY D   GYR WD    K++ SR+VIF E  + +   + T  V E  +  +  
Sbjct: 662  SKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTXDVTEIDQKKSEF 721

Query: 583  V------ENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMESNV 744
            V      E+ +Q    K+ E V                RRS R  +PP   S  +     
Sbjct: 722  VNLDEXTESTVQKGGEKNKENVNSQVXLSTPVAEV---RRSXRNIRPPQRYSPVLN---- 774

Query: 745  AYCLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWV 924
             Y LLT+ GEP  + EA +  ++S+W  AM +E+++L  NQTW+L  LP G+KA+ NKWV
Sbjct: 775  -YLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWV 833

Query: 925  YKIKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQ 1104
            Y+IK + +D  +RY+ARLVVKG+ QKEGID+ EIFSP            M A  +LHLEQ
Sbjct: 834  YRIKNE-HDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQ 892

Query: 1105 LDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMS 1284
            LDVKTAFLHG+LEE++YM+QPEGF   G+ENLVC+L KSLYGLKQAPR WYK+FD+F+  
Sbjct: 893  LDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHR 952

Query: 1285 LEYNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLAREFDMKDLGP 1464
            + + R  +DHC Y K FD N +IILLLYVDDML+ G + ++I  +K QL+++F MKDLG 
Sbjct: 953  IGFKRCEADHCCYXKSFD-NSYIILLLYVDDMLIXGSDIEKINNLKKQLSKQFAMKDLGA 1011

Query: 1465 ANKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPSNE 1644
            A +ILGM+I RD+ N  + LSQ  Y +K+L RFNM + KPVSTP+  +FKLS    P  E
Sbjct: 1012 AKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTE 1071

Query: 1645 AERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYIRG 1824
             ER  MS+VPYASA+GSLM+AM+CTRPDIA AVG VSR+M+ PG+ HW+ +K +LRY++G
Sbjct: 1072 EERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKXHWEAVKWILRYLKG 1131

Query: 1825 TSDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTT 2004
            + D  LC+ G+   ++GYVD+DFAGD+D RKST G+VFTL G A+SW S LQ +V LSTT
Sbjct: 1132 SLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTXGFVFTLGGTAISWTSNLQKIVTLSTT 1191

Query: 2005 EAEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            E EY+AAT+A KE +W+   L+ELG KQE  +L  DSQ
Sbjct: 1192 EXEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQ 1229



 Score = 44.3 bits (103), Expect(3) = 0.0
 Identities = 24/39 (61%), Positives = 27/39 (69%)
 Frame = +2

Query: 107 QKTVHGGDTPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           +KT+ G  TPQQNGV ER N TL ER R+M   A LPKT
Sbjct: 563 EKTIPG--TPQQNGVXERXNXTLNERARSMRLHAGLPKT 599



 Score = 37.4 bits (85), Expect(3) = 0.0
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E E+  K KCLR+DNGGEY    F      +GI  + T+
Sbjct: 527 VETETXLKXKCLRSDNGGEYIDGGFSEYCAAQGIXMEKTI 566


>emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera]
          Length = 1299

 Score =  616 bits (1588), Expect(3) = 0.0
 Identities = 313/637 (49%), Positives = 418/637 (65%), Gaps = 6/637 (0%)
 Frame = +1

Query: 226  WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKHADYSRLHTFGSPVYVMYNDQERTKLDP 405
            WA+ V T  Y+INR PS  ++ + P E+W+GK   +S L  F    YV  +   R+KLD 
Sbjct: 601  WADVVSTTTYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFCCVSYVHIDSDARSKLDA 660

Query: 406  KSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAE-----DKLQEKGDSNTVKENQET 570
            KS+ C F+GY D   GYR WD    K++ SR+VIF E     D+L    D   + + +  
Sbjct: 661  KSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRLTVTSDVTEIDQKKSE 720

Query: 571  TTVIVENNLQNEDSKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMESNVAY 750
               + E        +  E                  RRS+R  +PP   S  +      Y
Sbjct: 721  FVNLDELTESTVQKRGEEDKENVNSKVDLRTPIVEVRRSSRNIRPPQRYSPVLN-----Y 775

Query: 751  CLLTEDGEPSTFHEATKSSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWVYK 930
             LLT+ GEP  ++EA +  ++S+W  AM +E+++L  NQTW+L  LP G+KA+ NKWVY+
Sbjct: 776  LLLTDGGEPECYNEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYR 835

Query: 931  IKRDSNDQVERYRARLVVKGYAQKEGIDFNEIFSPXXXXXXXXXXXAMCATFDLHLEQLD 1110
            IK + +D  +RY+ARLVVKG+ QKEGI + EIFS             M A  +LHLEQLD
Sbjct: 836  IKNE-HDGSKRYKARLVVKGFQQKEGIGYIEIFSSVVKMSTIRLVLGMVAVENLHLEQLD 894

Query: 1111 VKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLE 1290
            VKTAFLHG+LEE++YM+QPEGF   G+ENLVC++ KSLYGLKQAPR WYK+FD+F+  + 
Sbjct: 895  VKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKMRKSLYGLKQAPRQWYKKFDNFMHRIG 954

Query: 1291 YNRLSSDHCAYYKRFDDNDFIILLLYVDDMLVAGPNKDRIQEMKAQLARE-FDMKDLGPA 1467
            + R  +DHC Y K FD N +IILLLYVDDML+AG + ++I  +K QL++  F MKDLG A
Sbjct: 955  FKRCEADHCCYVKSFD-NSYIILLLYVDDMLIAGSDIEKINNLKKQLSQTVFAMKDLGAA 1013

Query: 1468 NKILGMQIHRDRNNRKIWLSQKNYFRKILRRFNMQDCKPVSTPIPINFKLSSSMCPSNEA 1647
             +ILGM+I RD+ N  + LS   Y +K+L RFNM + K VSTP+  +FKLS    P  E 
Sbjct: 1014 KQILGMRIIRDKANGTLKLSHSEYVKKVLSRFNMNEAKLVSTPLGSHFKLSKEQSPKTEE 1073

Query: 1648 ERREMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWDTLKRVLRYIRGT 1827
            ER  MS+VPYASA+GSLM+AM+CTRPDIA AVG VSR+M+ PG++HW+ +K +LRY++G+
Sbjct: 1074 ERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGS 1133

Query: 1828 SDVALCYGGSDFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTE 2007
             D  LC+ G+   ++GYVD+DFAGD+D RKSTT +VFTL G A+SW S LQ +V LSTTE
Sbjct: 1134 LDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTEFVFTLGGTAISWTSNLQKIVTLSTTE 1193

Query: 2008 AEYMAATQACKEAVWIQRLLEELGHKQEKIVLFCDSQ 2118
            AEY+AAT+A KE +W+   L+ELG KQE  +L  DSQ
Sbjct: 1194 AEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQ 1230



 Score = 52.0 bits (123), Expect(3) = 0.0
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +2

Query: 101 RHQKTVHGGDTPQQNGVAERMNRTLLERTRAMLRTASLPKT 223
           R +KT+ G  TPQQNGVAERMNRTL ER R+M   A LPKT
Sbjct: 561 RMEKTIPG--TPQQNGVAERMNRTLNERARSMRLHAGLPKT 599



 Score = 42.7 bits (99), Expect(3) = 0.0
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +3

Query: 6   IELESGKKIKCLRTDNGGEYTSDEFESS*QQEGIKRQFTV 125
           +E E+G K+KCLR+DNGGEY    F      +GI+ + T+
Sbjct: 527 VETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTI 566