BLASTX nr result
ID: Rehmannia24_contig00017934
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00017934
(378 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353939.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 85 9e-15
ref|XP_004235401.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 85 9e-15
ref|XP_006493415.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 65 7e-09
ref|XP_006441411.1| hypothetical protein CICLE_v10020902mg [Citr... 65 7e-09
ref|XP_002317728.2| hypothetical protein POPTR_0012s03370g [Popu... 63 5e-08
gb|EMJ10532.1| hypothetical protein PRUPE_ppa008345mg [Prunus pe... 62 8e-08
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|5... 62 1e-07
emb|CBI35278.3| unnamed protein product [Vitis vinifera] 60 2e-07
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 60 2e-07
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera] 60 2e-07
ref|XP_004299466.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 57 2e-06
ref|XP_003592721.1| RING finger protein [Medicago truncatula] gi... 57 2e-06
ref|XP_003555841.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 56 4e-06
gb|ACT21194.1| zinc finger protein [Carica papaya] 55 7e-06
gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 55 9e-06
>ref|XP_006353939.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
tuberosum]
Length = 387
Score = 85.1 bits (209), Expect = 9e-15
Identities = 56/141 (39%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Frame = -2
Query: 377 FLEESDSAPPDNPIPN--PFF----TDNLPAATSLXXXXXXXXXXXXXXXXXXXXXXXXX 216
FLEES++APP NP PN PFF TD+LP
Sbjct: 48 FLEESETAPPSNPNPNTHPFFSAATTDDLPFGGGFPIVFSSNAASPAGGAVGF------- 100
Query: 215 XXXXFEDLSSLFGA----------RSPDEFNPFAFLNNYINNLQARGANIQVVFESPXXX 66
+DLS+LFG RSP++F+PFAFLNNY +++ RG NIQ++FE+
Sbjct: 101 -----DDLSALFGGMAGGSAALPGRSPNQFDPFAFLNNYFSSM--RGGNIQLIFENHPDG 153
Query: 65 XXXXXGVDFRLPSNLGDYFIG 3
G DFR+P NLGDYF+G
Sbjct: 154 GGGGAGGDFRIPGNLGDYFLG 174
>ref|XP_004235401.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Solanum lycopersicum] gi|460379301|ref|XP_004235402.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Solanum lycopersicum]
Length = 383
Score = 85.1 bits (209), Expect = 9e-15
Identities = 56/141 (39%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Frame = -2
Query: 377 FLEESDSAPPDNPIPN--PFF----TDNLPAATSLXXXXXXXXXXXXXXXXXXXXXXXXX 216
FLEES++APP NP PN PFF TD+LP
Sbjct: 48 FLEESETAPPSNPNPNTHPFFSAATTDDLPFGGGFPIVFSSNAASPAGGAVGF------- 100
Query: 215 XXXXFEDLSSLFGA----------RSPDEFNPFAFLNNYINNLQARGANIQVVFESPXXX 66
+DLS+LFG RSP++F+PFAFLNNY +++ RG NIQ++FE+
Sbjct: 101 -----DDLSALFGGMAGGSAALPGRSPNQFDPFAFLNNYFSSM--RGGNIQLIFENHPDG 153
Query: 65 XXXXXGVDFRLPSNLGDYFIG 3
G DFR+P NLGDYF+G
Sbjct: 154 GGGGAGGDFRIPGNLGDYFLG 174
>ref|XP_006493415.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Citrus sinensis]
Length = 352
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Frame = -2
Query: 200 EDLSSLFGA------RSPDEFNPFAFLNNYINNLQARGANIQVVFE--SPXXXXXXXXGV 45
+DLS+L G P EFNPF FL NY+ NL+A GA+IQ V E S G
Sbjct: 76 DDLSTLLGMGPTRSFTDPSEFNPFVFLQNYLQNLRANGASIQFVVENNSNVDPAAGGAGA 135
Query: 44 DFRLPSNLGDYFIG 3
FRLP+NLGDYFIG
Sbjct: 136 AFRLPANLGDYFIG 149
>ref|XP_006441411.1| hypothetical protein CICLE_v10020902mg [Citrus clementina]
gi|557543673|gb|ESR54651.1| hypothetical protein
CICLE_v10020902mg [Citrus clementina]
Length = 350
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Frame = -2
Query: 200 EDLSSLFGA------RSPDEFNPFAFLNNYINNLQARGANIQVVFE--SPXXXXXXXXGV 45
+DLS+L G P EFNPF FL NY+ NL+A GA+IQ V E S G
Sbjct: 76 DDLSTLLGMGPTRSFTDPSEFNPFVFLQNYLQNLRANGASIQFVVENNSNVDPAAGGAGA 135
Query: 44 DFRLPSNLGDYFIG 3
FRLP+NLGDYFIG
Sbjct: 136 AFRLPANLGDYFIG 149
>ref|XP_002317728.2| hypothetical protein POPTR_0012s03370g [Populus trichocarpa]
gi|550326298|gb|EEE95948.2| hypothetical protein
POPTR_0012s03370g [Populus trichocarpa]
Length = 269
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -2
Query: 173 RSPDEFNPFAFLNNYINNLQARGANIQVVFESPXXXXXXXXGVDFRLPSNLGDYFIG 3
+ PD FNPFAFL NY+ ++A GANIQ V E+ FRLP+NLGDYFIG
Sbjct: 98 QDPDGFNPFAFLQNYLQTMRAGGANIQFVIEN-NSGMGGMDTTGFRLPANLGDYFIG 153
>gb|EMJ10532.1| hypothetical protein PRUPE_ppa008345mg [Prunus persica]
Length = 336
Score = 62.0 bits (149), Expect = 8e-08
Identities = 49/139 (35%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Frame = -2
Query: 377 FLEESDSAPPDNPIPNPFFT----DNLPAATSLXXXXXXXXXXXXXXXXXXXXXXXXXXX 210
F+EE +++ P+ PNPFF+ D P A+S
Sbjct: 49 FVEEMEASNPNPFPPNPFFSVPSSDAPPFASS----------------GFPLLFSAPGPG 92
Query: 209 XXFEDLSSLFG---ARS-----PDEFNPFAFLNNYINNLQARGANIQVVFESPXXXXXXX 54
+DLS+LFG ARS PD FNPF FL NY+ L+A GAN+Q V ++
Sbjct: 93 NFSDDLSALFGGAPARSSPFQDPDAFNPFVFLQNYLQTLRANGANVQFVIDN--NPGAGG 150
Query: 53 XGVDFRLPS--NLGDYFIG 3
FR+P NLGDYF G
Sbjct: 151 DPAGFRVPPNLNLGDYFFG 169
>ref|XP_002329726.1| predicted protein [Populus trichocarpa]
gi|566206023|ref|XP_006374275.1| hypothetical protein
POPTR_0015s05600g [Populus trichocarpa]
gi|118486397|gb|ABK95038.1| unknown [Populus
trichocarpa] gi|550322032|gb|ERP52072.1| hypothetical
protein POPTR_0015s05600g [Populus trichocarpa]
Length = 345
Score = 61.6 bits (148), Expect = 1e-07
Identities = 46/125 (36%), Positives = 53/125 (42%)
Frame = -2
Query: 377 FLEESDSAPPDNPIPNPFFTDNLPAATSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFE 198
FLEE DS NP PNPF PA
Sbjct: 39 FLEELDSP---NPSPNPFDAGLGPALL-----LDDFASIFGGMNPTPRSSTTSTTATNSS 90
Query: 197 DLSSLFGARSPDEFNPFAFLNNYINNLQARGANIQVVFESPXXXXXXXXGVDFRLPSNLG 18
S LF + PD FNPF FL NY+ ++A GANIQ V E+ FR+P+NLG
Sbjct: 91 SASPLF--QDPDGFNPFVFLQNYLQTMRAGGANIQFVIEN-NPGMGGMDPTGFRVPANLG 147
Query: 17 DYFIG 3
DYFIG
Sbjct: 148 DYFIG 152
>emb|CBI35278.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 60.5 bits (145), Expect = 2e-07
Identities = 49/132 (37%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Frame = -2
Query: 377 FLEESDSAPPDN---PIPNPF--FTDNLPAATSLXXXXXXXXXXXXXXXXXXXXXXXXXX 213
FLEE ++ P+ PIPNPF F+D LP+ ++
Sbjct: 97 FLEEVENPNPNPIPVPIPNPFLGFSD-LPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV 155
Query: 212 XXXFEDLSSLFGARSPDEFNPFAFLNNYINNLQARGANIQVVFE--SPXXXXXXXXGVDF 39
D LFGA PD F+PFAFL NY+ L+A G N+Q V + SP F
Sbjct: 156 -----DFPGLFGA-DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEG--------TF 201
Query: 38 RLPSNLGDYFIG 3
RL NLGDYFIG
Sbjct: 202 RLSPNLGDYFIG 213
>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
ubiquitin-protein ligase RING1 isoform 2 [Vitis
vinifera]
Length = 369
Score = 60.5 bits (145), Expect = 2e-07
Identities = 49/132 (37%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Frame = -2
Query: 377 FLEESDSAPPDN---PIPNPF--FTDNLPAATSLXXXXXXXXXXXXXXXXXXXXXXXXXX 213
FLEE ++ P+ PIPNPF F+D LP+ ++
Sbjct: 53 FLEEVENPNPNPIPVPIPNPFLGFSD-LPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV 111
Query: 212 XXXFEDLSSLFGARSPDEFNPFAFLNNYINNLQARGANIQVVFE--SPXXXXXXXXGVDF 39
D LFGA PD F+PFAFL NY+ L+A G N+Q V + SP F
Sbjct: 112 -----DFPGLFGA-DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEG--------TF 157
Query: 38 RLPSNLGDYFIG 3
RL NLGDYFIG
Sbjct: 158 RLSPNLGDYFIG 169
>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
Length = 371
Score = 60.5 bits (145), Expect = 2e-07
Identities = 49/132 (37%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Frame = -2
Query: 377 FLEESDSAPPDN---PIPNPF--FTDNLPAATSLXXXXXXXXXXXXXXXXXXXXXXXXXX 213
FLEE ++ P+ PIPNPF F+D LP+ ++
Sbjct: 55 FLEEVENPNPNPIPVPIPNPFLGFSD-LPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV 113
Query: 212 XXXFEDLSSLFGARSPDEFNPFAFLNNYINNLQARGANIQVVFE--SPXXXXXXXXGVDF 39
D LFGA PD F+PFAFL NY+ L+A G N+Q V + SP F
Sbjct: 114 -----DFPGLFGA-DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEG--------TF 159
Query: 38 RLPSNLGDYFIG 3
RL NLGDYFIG
Sbjct: 160 RLSPNLGDYFIG 171
>ref|XP_004299466.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Fragaria vesca
subsp. vesca]
Length = 379
Score = 57.4 bits (137), Expect = 2e-06
Identities = 44/137 (32%), Positives = 55/137 (40%), Gaps = 12/137 (8%)
Frame = -2
Query: 377 FLEESDSAPPDNPIPNPFFTDNLPAATSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFE 198
FLEE +S+ P NPIPNPFF + P S E
Sbjct: 48 FLEEMESSNP-NPIPNPFFPSDGPPFPSAGFPTFLFGAPTAAAGPRNLA----------E 96
Query: 197 DLSSLFGA------------RSPDEFNPFAFLNNYINNLQARGANIQVVFESPXXXXXXX 54
DLS++ G PD F+PF FL +Y+ L+A GAN+Q V +
Sbjct: 97 DLSAILGGAGSRSTSRASPFHDPDAFDPFRFLESYLQGLRADGANVQFVIDHTGGDGGRD 156
Query: 53 XGVDFRLPSNLGDYFIG 3
F NLGDYF G
Sbjct: 157 FS-GFPTNVNLGDYFFG 172
>ref|XP_003592721.1| RING finger protein [Medicago truncatula]
gi|355481769|gb|AES62972.1| RING finger protein
[Medicago truncatula]
Length = 315
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = -2
Query: 164 DEFNPFAFLNNYINNLQARGANIQVVFESPXXXXXXXXGVDFRLPSNLGDYFIG 3
D F+PFAFL N++N L A GANIQ +P FR+PSNLGDYF+G
Sbjct: 98 DSFDPFAFLQNHLNGLHADGANIQFEINNPSESEP-----GFRVPSNLGDYFLG 146
>ref|XP_003555841.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 298
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -2
Query: 194 LSSLFGAR-SPDEFNPFAFLNNYINNLQARGANIQVVFESPXXXXXXXXGVDFRLPSNLG 18
LSS+ +R PD F+P FL N+I L+A GANIQV F P FRLP+N+G
Sbjct: 73 LSSVSRSRPEPDMFDPMVFLQNHIQGLRADGANIQVDFGHPSEQQ------GFRLPANIG 126
Query: 17 DYFIG 3
DYF+G
Sbjct: 127 DYFMG 131
>gb|ACT21194.1| zinc finger protein [Carica papaya]
Length = 340
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Frame = -2
Query: 200 EDLSSLFGARSP-----------DEFNPFAFLNNYINNLQARGANIQVVFESPXXXXXXX 54
+DLS+ FG P + FNPF FL NY+ L+A GANIQ V E+
Sbjct: 74 DDLSAFFGGMVPPPSATARPNDTEVFNPFLFLQNYLQTLRANGANIQFVIENNSPGGSGP 133
Query: 53 XGVDFRLPS--NLGDYFIG 3
G FRLP NLGDYF+G
Sbjct: 134 SGA-FRLPGSLNLGDYFLG 151
>gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 378
Score = 55.1 bits (131), Expect = 9e-06
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Frame = -2
Query: 200 EDLSSLFG--------ARSPDEFNPFAFLNNYINNLQARGANIQVVFESPXXXXXXXXGV 45
+DL +LFG + D FNPFAFL NY+ L+A GAN+Q V +
Sbjct: 101 DDLPALFGGPLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDG-----NPGDPA 155
Query: 44 DFRLPS--NLGDYFIG 3
FR+P+ NLGDYF G
Sbjct: 156 GFRVPTNLNLGDYFFG 171