BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00017929
         (661 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   236   5e-60
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...   236   6e-60
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   230   3e-58
gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]       228   1e-57
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   221   2e-55
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   221   2e-55
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...   217   3e-54
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...   214   2e-53
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...   214   2e-53
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   213   3e-53
gb|EOY15126.1| Pseudouridine synthase family protein isoform 2, ...   213   4e-53
gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [...   213   4e-53
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   210   3e-52
ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Caps...   206   7e-51
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl...   205   9e-51
ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata] ...   205   9e-51
ref|NP_177732.2| RNA pseudourine synthase 2 [Arabidopsis thalian...   204   2e-50
ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thalian...   204   2e-50
ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor...   202   1e-49
gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus...   201   2e-49

>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Solanum tuberosum]
          Length = 431

 Score =  236 bits (602), Expect = 5e-60
 Identities = 119/182 (65%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
 Frame = -1

Query: 544 DSDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVS 365
           DSDD  + + GR +N+SGVK+EETV+  + KLRLDSW+SSRI+G+SRARVQSSIRSGLVS
Sbjct: 40  DSDDSPDEIPGRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVS 99

Query: 364 VNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHP 185
           VNG + +KVSH+V+ GD V+C IA+L+PLRAEPEDIPLDIV+EDEHVLVVNKPAHMVVHP
Sbjct: 100 VNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHP 159

Query: 184 APGNATGTLVNGILNHCRLSTV-FLSPEALPETDDDSGDEASAFSVDQGHTVDIGFGLSE 8
           APGNATGTLV+GIL+HC L T+ FL  E L + +D S DE + FS ++    D    + E
Sbjct: 160 APGNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVMCE 219

Query: 7   AS 2
           +S
Sbjct: 220 SS 221


>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 436

 Score =  236 bits (601), Expect = 6e-60
 Identities = 127/209 (60%), Positives = 155/209 (74%), Gaps = 6/209 (2%)
 Frame = -1

Query: 610 PSLQKLISTARAYSTSISA-----ANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQKLR 446
           P   K IS +R  S    A      + DSDD  + + GR +N+SGVK+EETV+  + KLR
Sbjct: 13  PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLR 72

Query: 445 LDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEP 266
           LDSW+SSRI+G+SRARVQSSIRSGLVSVNG + +KVSH+V+ GD V+C IA+L+PLRAEP
Sbjct: 73  LDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEP 132

Query: 265 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPET 89
           EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV+GIL+HC L TV F   E L + 
Sbjct: 133 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDG 192

Query: 88  DDDSGDEASAFSVDQGHTVDIGFGLSEAS 2
           +D S DE + FS ++    D    + E+S
Sbjct: 193 EDASDDELNIFSPNRSPNYDDSSVMCESS 221


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  230 bits (586), Expect = 3e-58
 Identities = 130/205 (63%), Positives = 151/205 (73%), Gaps = 4/205 (1%)
 Frame = -1

Query: 646 HSVKPLSISLRNP-SLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETV 470
           H+ +   +  RNP S  ++    RA S S       +D+    VSGR  N++GV++EETV
Sbjct: 15  HTSQSALLFPRNPKSCSRVFRILRACSNS-------TDEPLVSVSGRRTNYAGVRLEETV 67

Query: 469 ---ELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCK 299
                DS KLRLDSW+SSRI GISRARVQSSIRSGLVSVN  I++KVSHV+R GD VNC 
Sbjct: 68  VDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGDKVNCT 127

Query: 298 IAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV 119
           I+ELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNA+GTLVNGIL+HC L TV
Sbjct: 128 ISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHCSLPTV 187

Query: 118 FLSPEALPETDDDSGDEASAFSVDQ 44
            L P    E DD S DE ++F+  Q
Sbjct: 188 AL-PNRDSEEDDISDDEFNSFAAGQ 211


>gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]
          Length = 1063

 Score =  228 bits (582), Expect = 1e-57
 Identities = 125/211 (59%), Positives = 151/211 (71%), Gaps = 2/211 (0%)
 Frame = -1

Query: 661 QSLSWHSVKPLS-ISLRNPSLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVK 485
           Q   W S KP   IS RN  L K ++ A   S S+  A  DSD      SG+    S ++
Sbjct: 6   QGRCWRSAKPRRVISRRNLCLLKFVTVACPRSNSLQNATSDSDSDDCAFSGQSAGHSRLR 65

Query: 484 IEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVN 305
           IEE V L+S+K+RLDSW+SSRI GISRARVQSSIRSG VSVNG ++NKVS++VR GDVVN
Sbjct: 66  IEEAVCLESEKVRLDSWISSRIGGISRARVQSSIRSGFVSVNGSVVNKVSYLVRHGDVVN 125

Query: 304 CKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRL- 128
           C + EL+PLRAEPEDIPLDIV+EDEH+LV+NKP HMVVHPAPGNA GTLVNGIL HC+L 
Sbjct: 126 CSVPELRPLRAEPEDIPLDIVHEDEHILVLNKPPHMVVHPAPGNANGTLVNGILGHCQLP 185

Query: 127 STVFLSPEALPETDDDSGDEASAFSVDQGHT 35
            +   SP+   E ++DS D +   S+D  HT
Sbjct: 186 PSSSFSPDV--EIEEDSSDGSCIDSLDH-HT 213


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  221 bits (563), Expect = 2e-55
 Identities = 115/188 (61%), Positives = 140/188 (74%), Gaps = 1/188 (0%)
 Frame = -1

Query: 610 PSLQKLISTARAYSTSISA-ANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSW 434
           P+ +++ S     S++ S   + D D++    S R  N++G ++EETV+++  K+RLDSW
Sbjct: 23  PNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSW 82

Query: 433 LSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIP 254
           +S RINGISRARVQSSIR+GLVSVNG +I+KVSH V+ GDV+NC I+ELQPLRAEPEDI 
Sbjct: 83  ISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDID 142

Query: 253 LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTVFLSPEALPETDDDSG 74
           LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN ILNHC L  V  S        D S 
Sbjct: 143 LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSD 202

Query: 73  DEASAFSV 50
           DE S+  V
Sbjct: 203 DEFSSIGV 210


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  221 bits (563), Expect = 2e-55
 Identities = 115/188 (61%), Positives = 140/188 (74%), Gaps = 1/188 (0%)
 Frame = -1

Query: 610 PSLQKLISTARAYSTSISA-ANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSW 434
           P+ +++ S     S++ S   + D D++    S R  N++G ++EETV+++  K+RLDSW
Sbjct: 23  PNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSW 82

Query: 433 LSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIP 254
           +S RINGISRARVQSSIR+GLVSVNG +I+KVSH V+ GDV+NC I+ELQPLRAEPEDI 
Sbjct: 83  ISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDID 142

Query: 253 LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTVFLSPEALPETDDDSG 74
           LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN ILNHC L  V  S        D S 
Sbjct: 143 LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSD 202

Query: 73  DEASAFSV 50
           DE S+  V
Sbjct: 203 DEFSSIGV 210


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
           gi|222843675|gb|EEE81222.1| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 444

 Score =  217 bits (552), Expect = 3e-54
 Identities = 117/173 (67%), Positives = 138/173 (79%)
 Frame = -1

Query: 586 TARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSWLSSRINGIS 407
           TA    T  S++  + +  QNP  G+  N+SGVK+EE+V+  S K RLDSW+SSRI+GIS
Sbjct: 51  TASRLLTVHSSSTREPNSNQNP--GQRINYSGVKLEESVDSKSGKSRLDSWISSRISGIS 108

Query: 406 RARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEH 227
           RARVQSSI+SGLVSVNG +I+KVSH V+ GD VNC I+ELQPLRAEPE+IPLDIVYEDE+
Sbjct: 109 RARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKVNCVISELQPLRAEPENIPLDIVYEDEN 168

Query: 226 VLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTVFLSPEALPETDDDSGDE 68
           VLVVNKPAHMVVHPAPGNATGTLVNGIL+HC L TV  S E L   +D S D+
Sbjct: 169 VLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTV-SSQEVLSGAEDVSDDD 220


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537377|gb|ESR48495.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score =  214 bits (544), Expect = 2e-53
 Identities = 107/152 (70%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
 Frame = -1

Query: 502 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVR 323
           N++GV++EETV+  + KLRLD+W+SSRI+GISRARVQSSIRSGLVSVNG +++KVSH V+
Sbjct: 54  NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNVK 113

Query: 322 DGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGIL 143
            GD+VNC I+ELQPLRAE EDIPLDIVYED++VLVVNKPAHMVVHPAPGNATGTLVNGIL
Sbjct: 114 GGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGIL 173

Query: 142 NHCRLSTVFLS-PEALPETDDDSGDEASAFSV 50
           +HC L T+  S  EA  + +D S DE  + S+
Sbjct: 174 HHCSLPTLASSNQEAFSDAEDISDDEEFSSSI 205


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537376|gb|ESR48494.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score =  214 bits (544), Expect = 2e-53
 Identities = 107/152 (70%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
 Frame = -1

Query: 502 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVR 323
           N++GV++EETV+  + KLRLD+W+SSRI+GISRARVQSSIRSGLVSVNG +++KVSH V+
Sbjct: 54  NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNVK 113

Query: 322 DGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGIL 143
            GD+VNC I+ELQPLRAE EDIPLDIVYED++VLVVNKPAHMVVHPAPGNATGTLVNGIL
Sbjct: 114 GGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGIL 173

Query: 142 NHCRLSTVFLS-PEALPETDDDSGDEASAFSV 50
           +HC L T+  S  EA  + +D S DE  + S+
Sbjct: 174 HHCSLPTLASSNQEAFSDAEDISDDEEFSSSI 205


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score =  213 bits (543), Expect = 3e-53
 Identities = 106/152 (69%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
 Frame = -1

Query: 502 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVR 323
           N++GV++EETV+  + KLRLD+W+SSRI+GISRARVQSSIRSGLVS+NG +++KVSH V+
Sbjct: 54  NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVK 113

Query: 322 DGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGIL 143
            GD+VNC I+ELQPLRAE EDIPLDIVYED++VLVVNKPAHMVVHPAPGNATGTLVNGIL
Sbjct: 114 GGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGIL 173

Query: 142 NHCRLSTVFLS-PEALPETDDDSGDEASAFSV 50
           +HC L T+  S  EA  + +D S DE  + S+
Sbjct: 174 HHCSLPTLASSNQEAFSDAEDISDDEEFSSSI 205


>gb|EOY15126.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
           cacao]
          Length = 409

 Score =  213 bits (542), Expect = 4e-53
 Identities = 124/201 (61%), Positives = 148/201 (73%), Gaps = 11/201 (5%)
 Frame = -1

Query: 592 ISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQ-KLRLDSWLSSRIN 416
           I  ARA  +S  AA       Q P+     +++GV++EETV+   Q KLRLDSW+SSRI 
Sbjct: 27  ILRARARPSSGCAAKT-----QEPIR---TSYTGVQLEETVDGTKQGKLRLDSWISSRIQ 78

Query: 415 GISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYE 236
           GISRARVQSSI+SGLV+VNG +++KVSH +R GD VNC I+ELQPLRAEPEDIPLDIVYE
Sbjct: 79  GISRARVQSSIKSGLVTVNGRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYE 138

Query: 235 DEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTVFLS-PEALPETDDDSGDE--- 68
           D+HVLVVNKP HMVVHPAPGNATGTLVNGIL+HC L TV LS  E L +T+D S D+   
Sbjct: 139 DDHVLVVNKPPHMVVHPAPGNATGTLVNGILHHCSLPTVALSEKEVLSDTEDVSDDDEGF 198

Query: 67  ----ASAFSVDQG--HTVDIG 23
               ++A SV  G  H +D G
Sbjct: 199 CYGASAAASVRPGIVHRLDKG 219


>gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  213 bits (542), Expect = 4e-53
 Identities = 124/201 (61%), Positives = 148/201 (73%), Gaps = 11/201 (5%)
 Frame = -1

Query: 592 ISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQ-KLRLDSWLSSRIN 416
           I  ARA  +S  AA       Q P+     +++GV++EETV+   Q KLRLDSW+SSRI 
Sbjct: 40  ILRARARPSSGCAAKT-----QEPIR---TSYTGVQLEETVDGTKQGKLRLDSWISSRIQ 91

Query: 415 GISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYE 236
           GISRARVQSSI+SGLV+VNG +++KVSH +R GD VNC I+ELQPLRAEPEDIPLDIVYE
Sbjct: 92  GISRARVQSSIKSGLVTVNGRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYE 151

Query: 235 DEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTVFLS-PEALPETDDDSGDE--- 68
           D+HVLVVNKP HMVVHPAPGNATGTLVNGIL+HC L TV LS  E L +T+D S D+   
Sbjct: 152 DDHVLVVNKPPHMVVHPAPGNATGTLVNGILHHCSLPTVALSEKEVLSDTEDVSDDDEGF 211

Query: 67  ----ASAFSVDQG--HTVDIG 23
               ++A SV  G  H +D G
Sbjct: 212 CYGASAAASVRPGIVHRLDKG 232


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  210 bits (534), Expect = 3e-52
 Identities = 105/154 (68%), Positives = 128/154 (83%), Gaps = 4/154 (2%)
 Frame = -1

Query: 502 NFSGVKIEETVEL---DSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSH 332
           N+ G+++EETV++    S KLRLDSW+SSRI+GISRARVQSSI+SGLVSVNG +++KVSH
Sbjct: 52  NYGGIRLEETVQVVHAKSVKLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVSH 111

Query: 331 VVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN 152
            V+ GD V C I+ELQPLRAEPED+PLDIVYEDEH+LVVNKP HMVVHPAPGN TGTLVN
Sbjct: 112 NVKFGDKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPGNPTGTLVN 171

Query: 151 GILNHCRLSTVFL-SPEALPETDDDSGDEASAFS 53
           GIL+HC L TV + S E L + +D S D+  ++S
Sbjct: 172 GILHHCNLPTVAISSQEVLSDAEDRSDDDERSYS 205


>ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Capsella rubella]
           gi|482570987|gb|EOA35175.1| hypothetical protein
           CARUB_v10020321mg [Capsella rubella]
          Length = 432

 Score =  206 bits (523), Expect = 7e-51
 Identities = 105/147 (71%), Positives = 123/147 (83%), Gaps = 1/147 (0%)
 Frame = -1

Query: 502 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVR 323
           N +G++IEETV+    K+RLDSW+SSRING+SRARVQSSIR GLV+VNG +++KVSH V+
Sbjct: 65  NNAGLRIEETVDDLKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVK 124

Query: 322 DGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGIL 143
            GD VNC I+ELQPL+AE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN TGTLVNGIL
Sbjct: 125 AGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGIL 184

Query: 142 NHCRL-STVFLSPEALPETDDDSGDEA 65
           +HC L S  + SPE     DDDS DE+
Sbjct: 185 HHCSLPSVAYSSPE-----DDDSDDES 206


>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
           X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
           PREDICTED: RNA pseudouridine synthase 2,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 450

 Score =  205 bits (522), Expect = 9e-51
 Identities = 113/181 (62%), Positives = 138/181 (76%), Gaps = 4/181 (2%)
 Frame = -1

Query: 586 TARAYSTSISAANFDSDDFQNPVSGRPN-NFSGVKIEETVE--LDSQKLRLDSWLSSRIN 416
           +A A + S SA + DSD       G P  NFSGV++EE V+  + S KLRLD+W+SSRIN
Sbjct: 41  SATASAASGSAGDSDSD-------GEPKLNFSGVRLEEAVDSRIGSGKLRLDNWISSRIN 93

Query: 415 GISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYE 236
           GISRARVQSSI+SGLV VNG +++KVS  V+ GD + C IAELQ LRA P++IPLDIVYE
Sbjct: 94  GISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNIPLDIVYE 153

Query: 235 DEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPETDDDSGDEASA 59
           DEHVLV+NKPAHMVVHPAPGN +GTLVNGIL+HC L  V F   EAL +T +DS DE ++
Sbjct: 154 DEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDT-EDSDDEFNS 212

Query: 58  F 56
           +
Sbjct: 213 Y 213


>ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata]
            gi|297333465|gb|EFH63883.1| T4O12.25 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 930

 Score =  205 bits (522), Expect = 9e-51
 Identities = 122/217 (56%), Positives = 145/217 (66%), Gaps = 9/217 (4%)
 Frame = -1

Query: 658  SLSWHSVKPLSISLRNPSLQKLISTARAYSTSISAANF--DSDDFQNPVSGRPN------ 503
            S S  SVK    SLR PS     S +  +S     +NF   S    N V+  P       
Sbjct: 510  SFSLISVK----SLRYPSSSPSSSLSLFFSFFPRVSNFVRASSGIPNLVACGPTEIIIPR 565

Query: 502  -NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVV 326
             N +G++IEETV+    K+RLDSW+SSR+NG+SRARVQSSIR GLV+VNG +++KVSH V
Sbjct: 566  VNNAGLRIEETVDALKGKIRLDSWISSRVNGVSRARVQSSIRLGLVTVNGRVVDKVSHNV 625

Query: 325  RDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGI 146
            + GD VNC I+ELQPL+AE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN TGTLVNGI
Sbjct: 626  KAGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGI 685

Query: 145  LNHCRLSTVFLSPEALPETDDDSGDEASAFSVDQGHT 35
            L+HC L  V  S       +DD  DE   FS D+  T
Sbjct: 686  LHHCSLPCVSYS-----NAEDDDSDE-ETFSDDEEMT 716


>ref|NP_177732.2| RNA pseudourine synthase 2 [Arabidopsis thaliana]
           gi|332197668|gb|AEE35789.1| RNA pseudourine synthase 2
           [Arabidopsis thaliana]
          Length = 313

 Score =  204 bits (519), Expect = 2e-50
 Identities = 106/156 (67%), Positives = 124/156 (79%)
 Frame = -1

Query: 502 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVR 323
           N +G++IEE V+    K+RLDSW+SSRING+SRARVQSSIR GLV+VNG +++KVSH V+
Sbjct: 65  NNAGLRIEEIVDAAKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVK 124

Query: 322 DGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGIL 143
            GD VNC I+ELQPL+AE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN TGTLVNGIL
Sbjct: 125 SGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGIL 184

Query: 142 NHCRLSTVFLSPEALPETDDDSGDEASAFSVDQGHT 35
           +HC L  V  S     E DDDS +E   FS D+  T
Sbjct: 185 HHCSLPCVDYSNS---EEDDDSDEE--TFSDDEEMT 215


>ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thaliana]
           gi|122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA
           pseudouridine synthase 2, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 2; AltName:
           Full=RNA-uridine isomerase 2; Flags: Precursor
           gi|332197669|gb|AEE35790.1| RNA pseudourine synthase 2
           [Arabidopsis thaliana]
          Length = 430

 Score =  204 bits (519), Expect = 2e-50
 Identities = 106/156 (67%), Positives = 124/156 (79%)
 Frame = -1

Query: 502 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVR 323
           N +G++IEE V+    K+RLDSW+SSRING+SRARVQSSIR GLV+VNG +++KVSH V+
Sbjct: 65  NNAGLRIEEIVDAAKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVK 124

Query: 322 DGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGIL 143
            GD VNC I+ELQPL+AE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN TGTLVNGIL
Sbjct: 125 SGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGIL 184

Query: 142 NHCRLSTVFLSPEALPETDDDSGDEASAFSVDQGHT 35
           +HC L  V  S     E DDDS +E   FS D+  T
Sbjct: 185 HHCSLPCVDYSNS---EEDDDSDEE--TFSDDEEMT 215


>ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer
           arietinum]
          Length = 438

 Score =  202 bits (513), Expect = 1e-49
 Identities = 109/179 (60%), Positives = 135/179 (75%), Gaps = 3/179 (1%)
 Frame = -1

Query: 580 RAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETV--ELDSQKLRLDSWLSSRINGIS 407
           R  + ++S    DS+    P S    N++GV++EE V  E+ S KLRLD+W+SSRINGIS
Sbjct: 41  RGVARAVSGLADDSNSNGEPKS----NYAGVRLEEIVDGEIKSGKLRLDTWISSRINGIS 96

Query: 406 RARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEH 227
           RARVQSSI++GLV VNG +++KVS  VR GD + C IAELQ LRA PE+IPLDIVYEDEH
Sbjct: 97  RARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEH 156

Query: 226 VLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPETDDDSGDEASAFS 53
           +LV+NKPAHMVVHPAPGN +GTLVNGIL+HC L  V F   EAL +T +DS DE + F+
Sbjct: 157 LLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDT-EDSDDELNGFT 214


>gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 447

 Score =  201 bits (511), Expect = 2e-49
 Identities = 106/188 (56%), Positives = 135/188 (71%), Gaps = 2/188 (1%)
 Frame = -1

Query: 613 NPSLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETVE--LDSQKLRLD 440
           +PS   L +T+  + ++I++A        +    R  NFSG+++EE V+  + S KLRLD
Sbjct: 25  SPSSLFLYATSYKFRSTIASACSGFTGDSDSDGERKLNFSGLRLEEAVDSRIGSAKLRLD 84

Query: 439 SWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPED 260
           SW+SSRINGISRARVQSSI+SGLV VNG +++K S  V+ GD + C IAELQ LRA PE+
Sbjct: 85  SWISSRINGISRARVQSSIKSGLVHVNGRVVDKASFNVKAGDQIKCTIAELQKLRAVPEN 144

Query: 259 IPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTVFLSPEALPETDDD 80
           IPLDIVYEDEHVLV+NKPAHMVVHPAPGN +GTLVNGIL+HC L  V  S E      +D
Sbjct: 145 IPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEGLSDTED 204

Query: 79  SGDEASAF 56
             DE +++
Sbjct: 205 CDDEVNSY 212