BLASTX nr result
ID: Rehmannia24_contig00017799
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00017799
(1042 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS68498.1| hypothetical protein M569_06270, partial [Genlise... 300 8e-79
emb|CBI36057.3| unnamed protein product [Vitis vinifera] 297 4e-78
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ... 294 4e-77
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ... 280 5e-73
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ... 270 5e-70
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ... 270 5e-70
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr... 266 1e-68
gb|EOY26936.1| MMS19 nucleotide excision repair protein, putativ... 266 1e-68
gb|EOY26935.1| MMS19 nucleotide excision repair protein, putativ... 266 1e-68
gb|EOY26934.1| MMS19 nucleotide excision repair protein, putativ... 266 1e-68
gb|EOY26932.1| MMS19 nucleotide excision repair protein, putativ... 266 1e-68
gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus pe... 266 1e-68
gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis] 263 6e-68
ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304... 252 1e-64
ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Popu... 251 3e-64
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ... 250 7e-64
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19... 249 1e-63
ref|XP_006595125.1| PREDICTED: DNA repair/transcription protein ... 242 2e-61
ref|XP_006595124.1| PREDICTED: DNA repair/transcription protein ... 242 2e-61
ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair ... 239 2e-60
>gb|EPS68498.1| hypothetical protein M569_06270, partial [Genlisea aurea]
Length = 970
Score = 300 bits (767), Expect = 8e-79
Identities = 182/349 (52%), Positives = 224/349 (64%), Gaps = 4/349 (1%)
Frame = +2
Query: 2 AMLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKIL 181
+ML FS+ + AF SL+R D A++Y GVKGL+ LA FPESF PV + +Y KIL
Sbjct: 420 SMLQIFSEPMAAAFASLIRF---DNLNGAFLYLGVKGLETLAAFPESFSPVPELMYRKIL 476
Query: 182 LELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDS 361
+LV I+ ++ +K FLW LAL ALVEIG FI+ C S+KAV FE+ VVEKIVSLISSD+S
Sbjct: 477 AQLVIIIATEGNKKFLWKLALSALVEIGLFINCCWGSQKAVIFENEVVEKIVSLISSDNS 536
Query: 362 ALPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYS 541
AL SLKLQAAFE+G TR FML V +D+A+ + +DH N E+ L VKL D YS
Sbjct: 537 ALSVSLKLQAAFEVGKTRTNFMLLVIHTIDDAIEANLTAFHDHGNHEAIDLTVKLFDAYS 596
Query: 542 QKVLPWFLEIGGPEEIPLNFALSIWDRIENRR-SLNLNPLEPTS-DVLGATMTAMKKAVG 715
Q LPW + G EEIPLN ALSIW+ IEN L + +E S D+L A TAMK AVG
Sbjct: 597 QSFLPWAIGPDGSEEIPLNLALSIWEMIENGTVPLKHHTMEAGSQDLLRAITTAMKSAVG 656
Query: 716 SCSKESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGN--SSGRDEWLT 889
SCS SQ IINKA + + G + ++ + S RD+ L
Sbjct: 657 SCSTGSQNTIINKAAGVIFSSG-------------VFDSGFKSADSVMDVEFSSRDKCLV 703
Query: 890 SLFASVVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLP 1036
SL A+VVI L QT+IP G+MIL LFI L+NGH+PSAHALGSLVNKLP
Sbjct: 704 SLLAAVVIPLHSQTSIPRGEMILLLFIRGLINGHVPSAHALGSLVNKLP 752
>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
Length = 1146
Score = 297 bits (761), Expect = 4e-78
Identities = 166/343 (48%), Positives = 226/343 (65%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
ML FS L++AF S+L +S A +Y GVKGLQ+LATFP F P+SKSI++ +LL
Sbjct: 487 MLHSFSSLLMKAFSSVLDASTDKDAYEADIYSGVKGLQILATFPGEFLPISKSIFENVLL 546
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
+SI+ D +K LW LALKALV+IG FID+ +SEKA+S+ IVVEKIVSL+ DD
Sbjct: 547 TFISIIVEDFNKTLLWKLALKALVQIGSFIDRFHESEKALSYNYIVVEKIVSLMFLDDFG 606
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
LP L+L+A +IG T ML + QGL++A+ SE H NL+S K+ V+LL+ YS
Sbjct: 607 LPFQLRLEAISDIGTTGLNVMLKIVQGLEDAIFANLSEVYVHGNLKSAKIAVQLLECYSN 666
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
K+LP G E++ FA++IW++IEN + ++ E +++L ATMTAMK AVGSCS
Sbjct: 667 KLLPGIHGAGDFEDVLSRFAVNIWNQIENSMAFSVGAQE--NELLNATMTAMKLAVGSCS 724
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
+ SQ II KA T++ EGLQ T +L S RD+W+ SLFAS
Sbjct: 725 EGSQGKIIKKAYSVLSSCPSFTLMESMPITGTVQLEGLQHTQDLECFSCRDKWVISLFAS 784
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKL 1033
+IA+RPQT+IPN +++L LF+ +LL GH+P+A ALGS+VNKL
Sbjct: 785 AIIAVRPQTHIPNIRVVLHLFMTNLLKGHVPAAQALGSMVNKL 827
>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
lycopersicum]
Length = 1153
Score = 294 bits (752), Expect = 4e-77
Identities = 172/346 (49%), Positives = 223/346 (64%), Gaps = 1/346 (0%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L FS SL F L+R+S + ++AYVY VKGL++LATFP SF VSK +Y+ ILL
Sbjct: 497 ILHSFSTSLCNVFFCLIRASCVESTRNAYVYAAVKGLEILATFPGSFISVSKLMYENILL 556
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
L SI+ S+ +K FLW ALKALVEI F++K + EKA SF SIV +KIVSLISSDD
Sbjct: 557 TLTSIIESEFNKKFLWKAALKALVEISLFVNKYHEDEKAASFNSIVKQKIVSLISSDDLN 616
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P SLKL+A F+IG T K FML+V L++ ++ SE H + L LL+ YS
Sbjct: 617 MPQSLKLEAVFDIGLTGKNFMLSVVSELEKTISANLSEILVHGDRRLAGLTAGLLECYSN 676
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KVLPWF GG +E+ L+FA++I+ ++E+ SL+L ++LGATM AMK+A+ CS
Sbjct: 677 KVLPWFHVNGGADEVSLSFAVNIFTKMEHNTSLSLE--AEGKELLGATMAAMKQAMTCCS 734
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTI-KEEGLQQTHNLGNSSGRDEWLTSLFA 901
ESQE ++ KA K+ L QT S +DEW+ SLFA
Sbjct: 735 VESQEKVLQKAIDVMETNSFFFSNNLILGTDLFNKKTQLGQTSE--GLSCQDEWIISLFA 792
Query: 902 SVVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPL 1039
SVVIALRPQT IPN +++LQL ++LL GHIPSA ALGSLVNKLPL
Sbjct: 793 SVVIALRPQTQIPNIRLLLQLLAMTLLEGHIPSAQALGSLVNKLPL 838
>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
tuberosum]
Length = 1170
Score = 280 bits (717), Expect = 5e-73
Identities = 172/376 (45%), Positives = 223/376 (59%), Gaps = 31/376 (8%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L F SL F L+R+S + +AYVY VKGL++L TFP SF VSK +Y+ ILL
Sbjct: 484 ILRSFCTSLCNVFFCLIRASCVESTWNAYVYAAVKGLEILGTFPGSFISVSKLMYENILL 543
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
L SI+ SD +K FLW ALKALVEI F++K + EKA F SIV +KIVSLISSDD
Sbjct: 544 TLTSIIESDFNKKFLWKAALKALVEISLFVNKYHEDEKAAIFNSIVKQKIVSLISSDDLN 603
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVK------- 523
+P SLKL+A F+IG T K FM +V L++ ++ SE +E+ +L++
Sbjct: 604 MPQSLKLEAIFDIGLTGKSFMHSVVSELEKTISANLSEILVRVLIETSRLLLTYHMHRLF 663
Query: 524 -----------------------LLDTYSQKVLPWFLEIGGPEEIPLNFALSIWDRIENR 634
LL+ YS KVLPWF GG +E+ L+FA++I+ ++EN
Sbjct: 664 NFGALFLLLQVHGDRRLAGLTPGLLECYSNKVLPWFHGNGGADEVSLSFAINIFTKMENN 723
Query: 635 RSLNLNPLEPTSDVLGATMTAMKKAVGSCSKESQEIIINKAXXXXXXXXXXXXXXXXXXX 814
SL+L ++LGATM AMK+A+ CS ESQE ++ KA
Sbjct: 724 SSLSLE--AKGKELLGATMAAMKQAMTGCSVESQEKVLQKAIDVMETSSFFLSNDLILGT 781
Query: 815 XTI-KEEGLQQTHNLGNSSGRDEWLTSLFASVVIALRPQTNIPNGKMILQLFIISLLNGH 991
K+ L QT S RDEW+TSLFASVVIALRPQT IPN +++LQL ++LL GH
Sbjct: 782 DLFNKKTQLGQTSE--GLSCRDEWITSLFASVVIALRPQTQIPNIRLLLQLLAMTLLEGH 839
Query: 992 IPSAHALGSLVNKLPL 1039
IPSA ALGSLVNKLPL
Sbjct: 840 IPSAQALGSLVNKLPL 855
>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Citrus sinensis]
Length = 1151
Score = 270 bits (691), Expect = 5e-70
Identities = 157/346 (45%), Positives = 215/346 (62%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L +S SL +A S L +S + VYFGVKGL +L TF +S SI++ ILL
Sbjct: 484 LLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFRGGSLIISNSIFENILL 543
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
SI+ S+ LW LALKALV IG FID+ +SEKA+S+ +V+EKIVSL SS D +
Sbjct: 544 TFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVSLASSHDFS 603
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P LKL+A EIGAT + ++L + QGL+EA+ E H N +S +++V+LL+ YS
Sbjct: 604 MPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVVQLLECYSN 663
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KVLP EIGG EE+ L FA++IW+ IE +S+ + +L ATM AMK AVGSCS
Sbjct: 664 KVLPRIHEIGGFEEVLLRFAVNIWNLIE--KSVTFSSQVHEKGLLDATMKAMKLAVGSCS 721
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
ESQ I+ KA + E Q T SS R+ W+ SLFAS
Sbjct: 722 VESQNIVFQKAFTVLSLGTYFPLEDAASNIPILLNE-FQLTQETSISSSREAWICSLFAS 780
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
V+IA RPQT+IPN +++++LF+ +LL G++P+A ALGS+VNKL L+
Sbjct: 781 VIIAARPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLGLK 826
>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Citrus sinensis]
Length = 1155
Score = 270 bits (691), Expect = 5e-70
Identities = 157/346 (45%), Positives = 215/346 (62%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L +S SL +A S L +S + VYFGVKGL +L TF +S SI++ ILL
Sbjct: 484 LLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFRGGSLIISNSIFENILL 543
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
SI+ S+ LW LALKALV IG FID+ +SEKA+S+ +V+EKIVSL SS D +
Sbjct: 544 TFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVSLASSHDFS 603
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P LKL+A EIGAT + ++L + QGL+EA+ E H N +S +++V+LL+ YS
Sbjct: 604 MPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVVQLLECYSN 663
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KVLP EIGG EE+ L FA++IW+ IE +S+ + +L ATM AMK AVGSCS
Sbjct: 664 KVLPRIHEIGGFEEVLLRFAVNIWNLIE--KSVTFSSQVHEKGLLDATMKAMKLAVGSCS 721
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
ESQ I+ KA + E Q T SS R+ W+ SLFAS
Sbjct: 722 VESQNIVFQKAFTVLSLGTYFPLEDAASNIPILLNE-FQLTQETSISSSREAWICSLFAS 780
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
V+IA RPQT+IPN +++++LF+ +LL G++P+A ALGS+VNKL L+
Sbjct: 781 VIIAARPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLGLK 826
>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
gi|557528866|gb|ESR40116.1| hypothetical protein
CICLE_v10024743mg [Citrus clementina]
Length = 1155
Score = 266 bits (680), Expect = 1e-68
Identities = 156/346 (45%), Positives = 214/346 (61%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L +S SL +A S L +S + VYFGVKGL +L TF +S SI++ ILL
Sbjct: 484 LLQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFSGGSLIISNSIFENILL 543
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
SI+ S+ LW LALKALV IG FID+ +SEKA+S+ +V+EKIVSL SS D +
Sbjct: 544 TFTSIIISEFENTLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVSLASSHDFS 603
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P LKL+A EIGAT + ++L + QGL+EA+ E H N +S +++V+LL+ YS
Sbjct: 604 MPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVVQLLECYSN 663
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KVLP EIGG EE+ L FA++IW+ IE +S+ + +L ATM AMK AVGSCS
Sbjct: 664 KVLPRIHEIGGFEEVLLRFAVNIWNLIE--KSVTFSSQVHEKGLLDATMKAMKLAVGSCS 721
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
ESQ I+ KA I+ Q T SS R+ W+ SLFAS
Sbjct: 722 VESQNIVFQKA-FTVLSLGTYFPLEDAASNIPIQLNEFQLTQETSISSSREAWICSLFAS 780
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
V+IA PQT+IPN +++++LF+ +LL G++P+A ALGS+VNKL L+
Sbjct: 781 VIIAACPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLGLK 826
>gb|EOY26936.1| MMS19 nucleotide excision repair protein, putative isoform 5
[Theobroma cacao]
Length = 1157
Score = 266 bits (680), Expect = 1e-68
Identities = 157/346 (45%), Positives = 212/346 (61%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L FS SL +AF S + D A VYFGVKGL +LATFPE + +SK +++KIL+
Sbjct: 486 LLRSFSSSLTKAFCSASICTSEDS-HDADVYFGVKGLLILATFPEGYLLISKPVFEKILM 544
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
VSIVT D S LW LALKALV+IG FI+KC +SEK S+ +VVEKIVS S D +
Sbjct: 545 TFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPSYLGLVVEKIVSFSSLGDFS 604
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P L+L+A EIG + K +ML V +GL+EA+ SE H + S +++ +LL YS
Sbjct: 605 IPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYVHGSSNSAEIVTQLLKCYSD 664
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KV+PW G +E+PL FA+ IW++IE N +VL M AMK AV SCS
Sbjct: 665 KVIPWIQCAKGFDEVPLQFAIHIWNQIELSMVFNATQTNKI-EVLDVMMKAMKLAVASCS 723
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
+E+Q II+ K+ ++E Q + NSS RDEW+ SLFA+
Sbjct: 724 EENQNIIVQKS------YHILSSSTSFPLKELFRQESFQIV-QVDNSSSRDEWILSLFAA 776
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
VVIA+ P+T +PN K +L LF+ +LL G++ +A ALGS+VNKL LE
Sbjct: 777 VVIAVHPETYVPNIKPLLYLFMTTLLKGNVVTAQALGSVVNKLGLE 822
>gb|EOY26935.1| MMS19 nucleotide excision repair protein, putative isoform 4
[Theobroma cacao]
Length = 1136
Score = 266 bits (680), Expect = 1e-68
Identities = 157/346 (45%), Positives = 212/346 (61%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L FS SL +AF S + D A VYFGVKGL +LATFPE + +SK +++KIL+
Sbjct: 486 LLRSFSSSLTKAFCSASICTSEDS-HDADVYFGVKGLLILATFPEGYLLISKPVFEKILM 544
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
VSIVT D S LW LALKALV+IG FI+KC +SEK S+ +VVEKIVS S D +
Sbjct: 545 TFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPSYLGLVVEKIVSFSSLGDFS 604
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P L+L+A EIG + K +ML V +GL+EA+ SE H + S +++ +LL YS
Sbjct: 605 IPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYVHGSSNSAEIVTQLLKCYSD 664
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KV+PW G +E+PL FA+ IW++IE N +VL M AMK AV SCS
Sbjct: 665 KVIPWIQCAKGFDEVPLQFAIHIWNQIELSMVFNATQTNKI-EVLDVMMKAMKLAVASCS 723
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
+E+Q II+ K+ ++E Q + NSS RDEW+ SLFA+
Sbjct: 724 EENQNIIVQKS------YHILSSSTSFPLKELFRQESFQIV-QVDNSSSRDEWILSLFAA 776
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
VVIA+ P+T +PN K +L LF+ +LL G++ +A ALGS+VNKL LE
Sbjct: 777 VVIAVHPETYVPNIKPLLYLFMTTLLKGNVVTAQALGSVVNKLGLE 822
>gb|EOY26934.1| MMS19 nucleotide excision repair protein, putative isoform 3
[Theobroma cacao]
Length = 1062
Score = 266 bits (680), Expect = 1e-68
Identities = 157/346 (45%), Positives = 212/346 (61%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L FS SL +AF S + D A VYFGVKGL +LATFPE + +SK +++KIL+
Sbjct: 486 LLRSFSSSLTKAFCSASICTSEDS-HDADVYFGVKGLLILATFPEGYLLISKPVFEKILM 544
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
VSIVT D S LW LALKALV+IG FI+KC +SEK S+ +VVEKIVS S D +
Sbjct: 545 TFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPSYLGLVVEKIVSFSSLGDFS 604
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P L+L+A EIG + K +ML V +GL+EA+ SE H + S +++ +LL YS
Sbjct: 605 IPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYVHGSSNSAEIVTQLLKCYSD 664
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KV+PW G +E+PL FA+ IW++IE N +VL M AMK AV SCS
Sbjct: 665 KVIPWIQCAKGFDEVPLQFAIHIWNQIELSMVFNATQTNKI-EVLDVMMKAMKLAVASCS 723
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
+E+Q II+ K+ ++E Q + NSS RDEW+ SLFA+
Sbjct: 724 EENQNIIVQKS------YHILSSSTSFPLKELFRQESFQIV-QVDNSSSRDEWILSLFAA 776
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
VVIA+ P+T +PN K +L LF+ +LL G++ +A ALGS+VNKL LE
Sbjct: 777 VVIAVHPETYVPNIKPLLYLFMTTLLKGNVVTAQALGSVVNKLGLE 822
>gb|EOY26932.1| MMS19 nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao]
Length = 1149
Score = 266 bits (680), Expect = 1e-68
Identities = 157/346 (45%), Positives = 212/346 (61%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L FS SL +AF S + D A VYFGVKGL +LATFPE + +SK +++KIL+
Sbjct: 486 LLRSFSSSLTKAFCSASICTSEDS-HDADVYFGVKGLLILATFPEGYLLISKPVFEKILM 544
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
VSIVT D S LW LALKALV+IG FI+KC +SEK S+ +VVEKIVS S D +
Sbjct: 545 TFVSIVTVDYSNTLLWKLALKALVQIGSFIEKCHESEKEPSYLGLVVEKIVSFSSLGDFS 604
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P L+L+A EIG + K +ML V +GL+EA+ SE H + S +++ +LL YS
Sbjct: 605 IPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYVHGSSNSAEIVTQLLKCYSD 664
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KV+PW G +E+PL FA+ IW++IE N +VL M AMK AV SCS
Sbjct: 665 KVIPWIQCAKGFDEVPLQFAIHIWNQIELSMVFNATQTNKI-EVLDVMMKAMKLAVASCS 723
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
+E+Q II+ K+ ++E Q + NSS RDEW+ SLFA+
Sbjct: 724 EENQNIIVQKS------YHILSSSTSFPLKELFRQESFQIV-QVDNSSSRDEWILSLFAA 776
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
VVIA+ P+T +PN K +L LF+ +LL G++ +A ALGS+VNKL LE
Sbjct: 777 VVIAVHPETYVPNIKPLLYLFMTTLLKGNVVTAQALGSVVNKLGLE 822
>gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
Length = 1158
Score = 266 bits (680), Expect = 1e-68
Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 10/353 (2%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
ML F+ SLV AF S L ++ + A +YF VKGLQ+LATFP F P+SK ++ IL
Sbjct: 487 MLQSFADSLVNAFSSSLATNANEVAHGADIYFKVKGLQILATFPGDFLPISKFLFANILT 546
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
L+SI+ D +K LW L LKALV IG F+D +SEKA+ + VV+K VSL+S DD
Sbjct: 547 ILMSIILVDFNKILLWKLVLKALVHIGSFVDVYHESEKALGYMGAVVDKTVSLVSRDDVK 606
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P SLKL+AA EIGA+ + ML + QG++EA+ S+ H NL+S + ++LL+ Y
Sbjct: 607 MPFSLKLEAASEIGASGRNHMLKIVQGMEEAIVAKLSD-YVHGNLKSAEKTIQLLECYCN 665
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
K+L W E GG EE+ L F ++IW+ +E+ + ++ E ++L ATM AMK A+GSCS
Sbjct: 666 KILSWINETGGLEEVLLRFVINIWNCVESCKDFSIQVQE--EELLDATMMAMKLAIGSCS 723
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSG----------R 874
+ESQ III+KA +I+ E L + + NSS R
Sbjct: 724 EESQNIIIHKAYSVISSSISIPFKESLDATSSIQLEELSVSEQIDNSSHRDDQIDKFSLR 783
Query: 875 DEWLTSLFASVVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKL 1033
DEW+ S FASV+IA+RP+ I N K IL LF+ ++L G +P+A ALGS++NKL
Sbjct: 784 DEWILSHFASVIIAVRPKAQIVNVKGILHLFMTTVLKGCVPAAQALGSVINKL 836
>gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]
Length = 1210
Score = 263 bits (673), Expect = 6e-68
Identities = 151/342 (44%), Positives = 211/342 (61%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L F SL++A S+L ++ + +Y V+ LQ+LATFPE +S +++ IL
Sbjct: 517 ILQSFCVSLIDALCSILETTANEGADDVDIYLRVRSLQILATFPEDLLAISDNVFKNILT 576
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
L+SI+ D ++ FLW LALKALV IG F+ + +SEKA S+ SIVVEK+VS +S D+
Sbjct: 577 TLMSIIFKDFNQKFLWKLALKALVHIGSFVSRY-ESEKAQSYNSIVVEKMVSWVSVDNCT 635
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
LP LKL+A EIGA+ + ML + QGL+ A+ + S+ H N+ S ++ ++LL YS+
Sbjct: 636 LPFPLKLEAVSEIGASGRNHMLNIVQGLEGAIFSYVSDFYVHGNVSSAEVAIQLLQFYSE 695
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
KV+PW E G EEI L FA +IWD +E+ S N+ E +L A M AMK VGSCS
Sbjct: 696 KVIPWIHETEGLEEILLRFATNIWDHVESWISCNVEVQE--KGLLDAIMMAMKLTVGSCS 753
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
+E Q II+ KA ++ E Q ++ N S RDE + SLFAS
Sbjct: 754 EEIQYIILQKAYTVLSSNTSLLLKKSSLTSIPVQLEESQLIQHVDNISHRDELVLSLFAS 813
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNK 1030
V+IA+RP+T IPN K IL LF+ +LL GH+PSA ALGS++NK
Sbjct: 814 VIIAVRPRTEIPNMKEILYLFLTTLLRGHVPSAQALGSMINK 855
>ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304108 [Fragaria vesca
subsp. vesca]
Length = 1149
Score = 252 bits (644), Expect = 1e-64
Identities = 150/346 (43%), Positives = 206/346 (59%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
ML + +L+ AF + L + A +YF VKGLQ+LATFP F + K++++ +L
Sbjct: 487 MLQSSAPTLITAFCTTLAQISCNVADDADIYFKVKGLQMLATFPGYFLQIPKAMFENVLK 546
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
L+SI+ D K LW LALKAL IG F+D +SEKA S+ S VVEK +SL DD
Sbjct: 547 TLMSIILVDFDKPLLWKLALKALAHIGSFVDVHLESEKAQSYTSFVVEKTISL-PQDDFD 605
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P LKL+A FEIGA+R ML + QGL++A+ S+ H +L++ + ++LL+ YS
Sbjct: 606 VPFPLKLEAVFEIGASRPNHMLRIIQGLEDAIVANLSKTFIHGDLKAAEKTIQLLECYSN 665
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
K++ W E GG EE+ F +SIW+ +E R + + +L ATMTAMK AVGSCS
Sbjct: 666 KIISWIDENGGLEEVLCRFVISIWNCLE--RCKDSSNQVQDKGLLDATMTAMKLAVGSCS 723
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
+ESQ III KA K E L L S RDEW+ SLFAS
Sbjct: 724 EESQNIIIQKAYGALSSGISIPFKDSTDDSSLAKLETLHLFEQLDKLSPRDEWIFSLFAS 783
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
V+IA+RP+T I N K IL LF+ +L+ G P+A ALGS++NKL ++
Sbjct: 784 VIIAMRPRTPIANAKGILHLFMTALVKGCTPAAQALGSVINKLGIQ 829
>ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
gi|550342418|gb|ERP63247.1| hypothetical protein
POPTR_0003s04720g [Populus trichocarpa]
Length = 913
Score = 251 bits (642), Expect = 3e-64
Identities = 151/346 (43%), Positives = 206/346 (59%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L FS SL + F S L +S A VY GVKGLQ+LATFP + VSKS + IL+
Sbjct: 255 LLQRFSTSLSKIFSSTLATSTDKPAHDADVYLGVKGLQILATFPGGYLLVSKSTCESILM 314
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
VSI+T D +K LW L++KALV+IG FI +SEK++S+ IVV+KIVS+ISSD+
Sbjct: 315 TFVSIITVDFNKTLLWKLSVKALVQIGLFIHGSNESEKSMSYMDIVVQKIVSMISSDNHD 374
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
+P L+L+A +IG + +ML + GL E + +E N++S K+++ LL+ YS
Sbjct: 375 IPFQLQLEAISDIGTSGLQYMLKIVTGLQEVIRANLAEVQG--NVKSAKVIIHLLECYSN 432
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
++LPW + EE+ L F +SIW++IEN + E ++L ATM MK AV SCS
Sbjct: 433 ELLPWIQKYEVFEEVLLQFVVSIWNQIENCMAFPDGIFE--KELLDATMKVMKLAVASCS 490
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFAS 904
ESQ III+KA EE L+ T S RDEW+ SLF S
Sbjct: 491 VESQNIIIDKAYTVLSSSTFLSTKDSLSSLQAQLEE-LEDTQETNKFSSRDEWIHSLFIS 549
Query: 905 VVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
V+IAL PQT IPN + +L +I L G++ +A ALGSLVNKL L+
Sbjct: 550 VIIALHPQTRIPNIRTVLHFLMIVFLKGYVTAAQALGSLVNKLDLK 595
>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 1147
Score = 250 bits (638), Expect = 7e-64
Identities = 144/347 (41%), Positives = 204/347 (58%)
Frame = +2
Query: 2 AMLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKIL 181
+ML FS S+V+ S V A Y VKGL L+TFP PVS+ I++ IL
Sbjct: 478 SMLQIFSCSVVQLLSSTFSGIVKRDLHDAEFYCAVKGLLNLSTFPVGSSPVSRVIFEDIL 537
Query: 182 LELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDS 361
LE +S +T + LW ALKAL IG F+DK P S ++ S+ IVVEKI + S D
Sbjct: 538 LEFMSFITVNFKFGSLWNHALKALQHIGSFVDKYPGSVESQSYMHIVVEKIALMFSPHDE 597
Query: 362 ALPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYS 541
LP LKL+ A +IG T + +ML + G++E + SE + N +S ++++ LLD YS
Sbjct: 598 VLPLMLKLEMAVDIGRTGRSYMLKIVGGIEETIFYNLSEVYVYGNSKSVEIVLSLLDCYS 657
Query: 542 QKVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSC 721
K+LPWF E G EE+ L FAL+IWD+IE + + + + +L ATM A+K +V SC
Sbjct: 658 TKILPWFDEAGDFEEVILRFALNIWDQIEKCSTFSTSMDKCIQVLLDATMMALKLSVRSC 717
Query: 722 SKESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLGNSSGRDEWLTSLFA 901
SKESQ II+ KA ++ EGLQ N + RDEW+ SLFA
Sbjct: 718 SKESQNIIVQKAFNVLLTSSFSPLKVTLSNTIPVQMEGLQFLQQKDNPTSRDEWILSLFA 777
Query: 902 SVVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKLPLE 1042
SV IALRPQ ++P+ ++I++L ++S G +P+A ALGS++NKL ++
Sbjct: 778 SVTIALRPQVHVPDVRLIIRLLMLSTTRGCVPAAQALGSMINKLSVK 824
>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
communis] gi|223544868|gb|EEF46383.1| DNA
repair/transcription protein met18/mms19, putative
[Ricinus communis]
Length = 1174
Score = 249 bits (636), Expect = 1e-63
Identities = 147/358 (41%), Positives = 211/358 (58%), Gaps = 15/358 (4%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
+L FS SL E F + L +S + Q +Y GVKGLQ+LATFP + +SK +D IL+
Sbjct: 486 LLQRFSTSLTETFSAALATSTSGPAQDVDMYLGVKGLQILATFPGGYLFLSKLTFDNILM 545
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
+SI+T D +K LW ALKALV+IG F+ C +S+K +S+ IVV K++ L SS D +
Sbjct: 546 TFLSIITVDFNKTLLWNQALKALVQIGSFVHGCNESDKEMSYVDIVVGKMILLASSPDFS 605
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSE------KNDHW---------NL 499
+P SLKL A IG + + +ML V GL+EA+ +E K + NL
Sbjct: 606 MPWSLKLTAISSIGMSGQKYMLKVFLGLEEAIRANLAEIYVCMIKKKIYVLYSCLVQGNL 665
Query: 500 ESDKLMVKLLDTYSQKVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVL 679
+S K++++LL+ YS ++LPW + G EE+ + F +++W++IEN + + +L
Sbjct: 666 KSAKILLQLLECYSDELLPWIQKTEGFEEVLMQFVVNLWNQIENFNAFTV-AFHGKESLL 724
Query: 680 GATMTAMKKAVGSCSKESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKEEGLQQTHNLG 859
A M MK AV CS ESQ +II KA +++ E + +
Sbjct: 725 DAIMKVMKDAVAFCSVESQNVIIYKA-YGVLSSSTFLPLKESLSENSVQLECFRAIQQMD 783
Query: 860 NSSGRDEWLTSLFASVVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKL 1033
S RDEW+ SLFASV+IALRPQT+IPN +++L LFI +LL GH+ +A ALGSLVNKL
Sbjct: 784 RLSSRDEWIHSLFASVIIALRPQTHIPNTRIVLHLFITALLKGHVTTAEALGSLVNKL 841
>ref|XP_006595125.1| PREDICTED: DNA repair/transcription protein mms19-like isoform X2
[Glycine max]
Length = 1013
Score = 242 bits (617), Expect = 2e-61
Identities = 150/345 (43%), Positives = 204/345 (59%), Gaps = 2/345 (0%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
ML FS L AF S+L S P Y GVKGLQ+LA F P+ KS+++ IL
Sbjct: 361 MLHRFSTPLFNAFGSVLAVSADRCPLDPDTYIGVKGLQILAMFGSDVFPIQKSVFENILK 420
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
+ +SI+ D +K LW ALKAL ++G F+ K +SEKA+S+ ++VVEKIV ++S DD
Sbjct: 421 KFMSIIVEDFNKTILWEAALKALYQVGSFVQKFHESEKAMSYRNLVVEKIVEILSLDDIT 480
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
LP SL+L+A IG T MLT+ QGL A+ + S+ + H NL S + V+LL+ YS
Sbjct: 481 LPFSLELEALSNIGMTGMKNMLTILQGLGRAVFSNLSKVHVHRNLRSSDIAVQLLECYSC 540
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
++LPW E GG E+ + F + IW + N ++ + L +L A M AMK +VGSC+
Sbjct: 541 QLLPWIHENGGSEDFVMQFVVDIWSQAGN--CMDFSTLFEEKGLLDAIMKAMKLSVGSCA 598
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKE-EGLQQTHNLGNSSGRDEWLTSLFA 901
ESQ +II KA +KE E L T N S RDE L SLFA
Sbjct: 599 VESQNLIIQKA---------YCVLSSHTNFQQLKEVERLPLTPGNYNISLRDEGLISLFA 649
Query: 902 SVVIALRPQTNIPNGKMILQLFIISLLNGH-IPSAHALGSLVNKL 1033
SVVIA+ P+T IPN ++++ LFII+LL G +P A ALGS++NKL
Sbjct: 650 SVVIAVFPKTYIPNKRVLMHLFIITLLRGGVVPVAQALGSILNKL 694
>ref|XP_006595124.1| PREDICTED: DNA repair/transcription protein mms19-like isoform X1
[Glycine max]
Length = 1132
Score = 242 bits (617), Expect = 2e-61
Identities = 150/345 (43%), Positives = 204/345 (59%), Gaps = 2/345 (0%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
ML FS L AF S+L S P Y GVKGLQ+LA F P+ KS+++ IL
Sbjct: 480 MLHRFSTPLFNAFGSVLAVSADRCPLDPDTYIGVKGLQILAMFGSDVFPIQKSVFENILK 539
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
+ +SI+ D +K LW ALKAL ++G F+ K +SEKA+S+ ++VVEKIV ++S DD
Sbjct: 540 KFMSIIVEDFNKTILWEAALKALYQVGSFVQKFHESEKAMSYRNLVVEKIVEILSLDDIT 599
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
LP SL+L+A IG T MLT+ QGL A+ + S+ + H NL S + V+LL+ YS
Sbjct: 600 LPFSLELEALSNIGMTGMKNMLTILQGLGRAVFSNLSKVHVHRNLRSSDIAVQLLECYSC 659
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
++LPW E GG E+ + F + IW + N ++ + L +L A M AMK +VGSC+
Sbjct: 660 QLLPWIHENGGSEDFVMQFVVDIWSQAGN--CMDFSTLFEEKGLLDAIMKAMKLSVGSCA 717
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKE-EGLQQTHNLGNSSGRDEWLTSLFA 901
ESQ +II KA +KE E L T N S RDE L SLFA
Sbjct: 718 VESQNLIIQKA---------YCVLSSHTNFQQLKEVERLPLTPGNYNISLRDEGLISLFA 768
Query: 902 SVVIALRPQTNIPNGKMILQLFIISLLNGH-IPSAHALGSLVNKL 1033
SVVIA+ P+T IPN ++++ LFII+LL G +P A ALGS++NKL
Sbjct: 769 SVVIAVFPKTYIPNKRVLMHLFIITLLRGGVVPVAQALGSILNKL 813
>ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Glycine max]
Length = 1135
Score = 239 bits (609), Expect = 2e-60
Identities = 151/344 (43%), Positives = 201/344 (58%), Gaps = 1/344 (0%)
Frame = +2
Query: 5 MLSDFSKSLVEAFISLLRSSVADKPQSAYVYFGVKGLQVLATFPESFPPVSKSIYDKILL 184
ML FS L AF S+L S P Y GVKGLQ+LA F P+ KSI++ IL
Sbjct: 481 MLHSFSTPLFNAFGSVLAVSADRGPLDPDTYVGVKGLQILAMFHSDVFPIQKSIFENILK 540
Query: 185 ELVSIVTSDCSKAFLWTLALKALVEIGCFIDKCPDSEKAVSFESIVVEKIVSLISSDDSA 364
+ +SI+ D +K LW ALKAL +G F K +SEKA+S+ ++VVEKIV ++S DD
Sbjct: 541 KFMSIIIEDFNKTILWEAALKALHHVGSFFQKFCESEKAMSYRNLVVEKIVEILSLDDIT 600
Query: 365 LPSSLKLQAAFEIGATRKVFMLTVAQGLDEAMNTIFSEKNDHWNLESDKLMVKLLDTYSQ 544
L SLK++A IG T MLT+ QGL A+ S+ H NL S ++ V+LL+ YS
Sbjct: 601 LSFSLKVEALLNIGKTGMKNMLTILQGLGRAVFANLSKVYVHRNLRSSEIAVQLLECYSC 660
Query: 545 KVLPWFLEIGGPEEIPLNFALSIWDRIENRRSLNLNPLEPTSDVLGATMTAMKKAVGSCS 724
++LPW E GG E+ + FA+ IW + N L+ P E +L A M AM+ +VGSCS
Sbjct: 661 QLLPWIHENGGSEDFVMQFAVDIWSQAGNCMDLS-TPFE-GKGLLDAMMKAMRLSVGSCS 718
Query: 725 KESQEIIINKAXXXXXXXXXXXXXXXXXXXXTIKE-EGLQQTHNLGNSSGRDEWLTSLFA 901
ESQ +II KA +KE E L T + S RDE + SLFA
Sbjct: 719 VESQNLIIRKA----------YSVLSSHTNFQLKEVERLPLTPGKYDISLRDEGIISLFA 768
Query: 902 SVVIALRPQTNIPNGKMILQLFIISLLNGHIPSAHALGSLVNKL 1033
SVVIA+ P+T IPN ++++ LFII+LL G +P A ALGS++NKL
Sbjct: 769 SVVIAVCPKTYIPNIRVLVHLFIITLLRGVVPVAQALGSILNKL 812