BLASTX nr result

ID: Rehmannia24_contig00017186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00017186
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245215.1| PREDICTED: carbon catabolite repressor prote...    59   5e-07
ref|XP_004969137.1| PREDICTED: carbon catabolite repressor prote...    57   3e-06
ref|XP_006483303.1| PREDICTED: carbon catabolite repressor prote...    56   4e-06
ref|XP_006450507.1| hypothetical protein CICLE_v10007580mg [Citr...    56   4e-06
ref|XP_003588706.1| Carbon catabolite repressor protein-like pro...    55   1e-05
ref|XP_002514362.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>ref|XP_004245215.1| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
           [Solanum lycopersicum]
          Length = 873

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 47/144 (32%), Positives = 59/144 (40%), Gaps = 17/144 (11%)
 Frame = +2

Query: 8   GRRGYSDRPLGPASGDQTELVSGDSHFRAVRETNRGFRPSYNAVP-----PPPQYVTGQQ 172
           GRR +S RP G  S D  ++V+GDSHF +VRETNR  RPS N  P     P P       
Sbjct: 41  GRRNFSHRPSGERSED--DIVTGDSHFNSVRETNRNLRPSPNFRPFRPRAPSPNIHPTHH 98

Query: 173 FYG------------PGSQSHRTCPPVFQHFPGPRPYRHPQQVGPALGNYXXXXXXXXXX 316
            YG            P  QS+R  PP    +   +  R   Q  P    Y          
Sbjct: 99  NYGQLPHPQPRQQFHPNQQSYRAMPPPAGFYQNQQFNRAVPQ-PPLRPQYYQNQQLNRPN 157

Query: 317 XSRHPRQVGPAFGNYQQFRPQQMP 388
              + +   P F   Q FRP+ +P
Sbjct: 158 FYENQKFNRPNFYENQPFRPRPLP 181


>ref|XP_004969137.1| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
           [Setaria italica]
          Length = 862

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/93 (40%), Positives = 40/93 (43%)
 Frame = +2

Query: 2   PHGRRGYSDRPLGPASGDQTELVSGDSHFRAVRETNRGFRPSYNAVPPPPQYVTGQQFYG 181
           P  RRGYS RP  P      ELVSGD H  AVR  N   R       PPP Y  G Q + 
Sbjct: 27  PRPRRGYSARPSPPPPDAGAELVSGDFHHSAVRAANESLR---RGGGPPPPYRQGPQPHQ 83

Query: 182 PGSQSHRTCPPVFQHFPGPRPYRHPQQVGPALG 280
           P     R   P   +   P  Y HPQQ  P  G
Sbjct: 84  PHYGYGRPQHPAPAYGAVPYNYGHPQQQQPPPG 116


>ref|XP_006483303.1| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
           [Citrus sinensis]
          Length = 732

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/100 (41%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
 Frame = +2

Query: 11  RRGYSDRPLGPASGDQTELVSGDSHFRAVRETNRGFRP-SYNAVPP-----------PPQ 154
           RRG+SDRP   A+G     VSGDSH  +V  +NRG R  +Y AVPP           PP 
Sbjct: 31  RRGFSDRPFNGANG---RFVSGDSHISSVSNSNRGVRQGNYTAVPPAPFYQNQPFRQPPP 87

Query: 155 YVTGQQF-----YGPGSQSHRTCPP-----VFQHFPGPRP 244
           Y   QQF     Y    Q  R  PP       Q  P PRP
Sbjct: 88  YNQNQQFRPPPLYNRNPQFRRPRPPFDQNQAVQSRPRPRP 127


>ref|XP_006450507.1| hypothetical protein CICLE_v10007580mg [Citrus clementina]
           gi|557553733|gb|ESR63747.1| hypothetical protein
           CICLE_v10007580mg [Citrus clementina]
          Length = 732

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/100 (41%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
 Frame = +2

Query: 11  RRGYSDRPLGPASGDQTELVSGDSHFRAVRETNRGFRP-SYNAVPP-----------PPQ 154
           RRG+SDRP   A+G     VSGDSH  +V  +NRG R  +Y AVPP           PP 
Sbjct: 31  RRGFSDRPFNGANG---RFVSGDSHISSVSNSNRGVRQGNYTAVPPAPFYQNQPFRQPPP 87

Query: 155 YVTGQQF-----YGPGSQSHRTCPP-----VFQHFPGPRP 244
           Y   QQF     Y    Q  R  PP       Q  P PRP
Sbjct: 88  YNQNQQFRPPPLYNRNPQFRRPRPPFDQNQAVQSRPRPRP 127


>ref|XP_003588706.1| Carbon catabolite repressor protein-like protein [Medicago
           truncatula] gi|355477754|gb|AES58957.1| Carbon
           catabolite repressor protein-like protein [Medicago
           truncatula]
          Length = 848

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 43/137 (31%), Positives = 56/137 (40%), Gaps = 13/137 (9%)
 Frame = +2

Query: 11  RRGYSDRPLGPASGDQTELVSGDSHFRAVRETNRGFRP----------SYNAVP-PPPQY 157
           RRGYS R     SG + +L +GD H R+VR+ N   R            YN  P PPPQY
Sbjct: 25  RRGYSGRSY---SGGRDQLATGDDHLRSVRDANSAIRRGESENVANQIQYNPRPYPPPQY 81

Query: 158 VTGQQFYGPGSQSHRTCPPVFQHFP--GPRPYRHPQQVGPALGNYXXXXXXXXXXXSRHP 331
                +  P        PP + H P   PRP+  PQ   P+                  P
Sbjct: 82  PPYDVYRHPP-------PPFYHHNPLYNPRPHPPPQYQNPSYNTRPHPP----------P 124

Query: 332 RQVGPAFGNYQQFRPQQ 382
            +  P + N ++FRP Q
Sbjct: 125 LRFRPPYDNRREFRPPQ 141


>ref|XP_002514362.1| conserved hypothetical protein [Ricinus communis]
           gi|223546818|gb|EEF48316.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
 Frame = +2

Query: 11  RRGYSDRPLGPASGDQTELVSGDSHFRAVRETNRGFRPS-----YNAV---PPPPQYVTG 166
           RRG+SDRP   + G   +LV+GDSHFR+V+ETN G R +     YN     P PP+Y   
Sbjct: 32  RRGFSDRPQYSSGGRGPQLVTGDSHFRSVQETNSGIRQAAGPQPYNQSQHRPQPPRYYPN 91

Query: 167 QQFYGPGSQSHRTCPPVFQHFPGPRP 244
             F  P            Q F  PRP
Sbjct: 92  PHFRRPPFDQS-------QGFQRPRP 110


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