BLASTX nr result

ID: Rehmannia24_contig00017037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00017037
         (1066 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    45   2e-07
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    44   4e-07
ref|XP_003605183.1| Cytochrome P450 [Medicago truncatula] gi|355...    46   1e-06
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    46   9e-06

>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 44.7 bits (104), Expect(2) = 2e-07
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +1

Query: 508 KPSFPYFKCNVDVALCSAKYSTSIRIILRDDLGKFVVAQTISFRSLFEIRETEAVGLERL 687
           KPS   F CNVD +   A+    I + +RD+ G+FV+A+T     L ++   EA+GL   
Sbjct: 530 KPSPGRFTCNVDASFSQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSA 589

Query: 688 YH 693
            H
Sbjct: 590 MH 591



 Score = 38.5 bits (88), Expect(2) = 2e-07
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
 Frame = +3

Query: 672 GVRAALSRIRRLGLRQVLVETDTKYVADSLSSSVNDESEYDTVLQECRVLLQGEPDLLV- 848
           G+ +A+  +R L L  V  E D+K V DSL  S +  S +  V+ ECR LL    DL+  
Sbjct: 585 GLLSAMHWVRDLQLGIVDFELDSKSVVDSLYGSTSGVSNFSAVINECRRLLAS--DLVTS 642

Query: 849 ---FLHHGGNMVSYELAK 893
              F+    N V++  A+
Sbjct: 643 DVRFIRRQANEVAHSFAR 660


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 44.3 bits (103), Expect(2) = 4e-07
 Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +3

Query: 672 GVRAALSRIRRLGLRQVLVETDTKYVADSLSSSVNDESEYDTVLQECRVLLQGEPDLLV- 848
           G+R A+  + +L L  V +E D K V DS+    N+++E+ +++ +CR LLQ   +  + 
Sbjct: 114 GLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKIS 173

Query: 849 FLHHGGNMVSYELAK 893
           F+    N+V++  A+
Sbjct: 174 FVRRQANVVAHSFAR 188



 Score = 37.4 bits (85), Expect(2) = 4e-07
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +1

Query: 511 PSFPYFKCNVDVALCSAKYSTSIRIILRDDLGKFVVAQTISFRSLFEIRETEAVGL 678
           P+  + KCNVD A+ S +      + +RD  G+F+ A T  +      +E EAVGL
Sbjct: 60  PAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGL 115


>ref|XP_003605183.1| Cytochrome P450 [Medicago truncatula] gi|355506238|gb|AES87380.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 348

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 23/57 (40%), Positives = 35/57 (61%)
 Frame = +1

Query: 508 KPSFPYFKCNVDVALCSAKYSTSIRIILRDDLGKFVVAQTISFRSLFEIRETEAVGL 678
           KPS   FKCNVD +   A+    I + +RD+ G++V+A+T     LF++   EA+GL
Sbjct: 207 KPSPGRFKCNVDASFSQAQNRVDIGVCIRDEEGRYVLAKTEWMSPLFDVDLGEALGL 263



 Score = 34.3 bits (77), Expect(2) = 1e-06
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +3

Query: 672 GVRAALSRIRRLGLRQVLVETDTKYVADSLSSSVNDESEYDTVLQECRVLLQGE 833
           G+ +A+  +R L L  V  E D+K V DSL  S    S +  V+ +CR LL  +
Sbjct: 262 GLLSAMYWVRNLQLGIVDFELDSKIVVDSLYGSKIGVSNFSAVINDCRRLLASD 315


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 45.8 bits (107), Expect(2) = 9e-06
 Identities = 24/57 (42%), Positives = 31/57 (54%)
 Frame = +1

Query: 508  KPSFPYFKCNVDVALCSAKYSTSIRIILRDDLGKFVVAQTISFRSLFEIRETEAVGL 678
            KP   +FKCNVD A         I I +RDD G+ V A+T     L ++ E EA+GL
Sbjct: 1566 KPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGL 1622



 Score = 31.2 bits (69), Expect(2) = 9e-06
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +3

Query: 672  GVRAALSRIRRLGLRQVLVETDTKYVADSLSSSVNDESEYDTVLQECRVLLQG--EPDLL 845
            G+  A+   +   L  +  E D+K V  S  ++ ND S+   +++ECR           +
Sbjct: 1621 GLLYAIRWAKEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSRV 1680

Query: 846  VFLHHGGNMVSYELAK 893
             F+    N V + LA+
Sbjct: 1681 EFIRRQANEVVHSLAR 1696


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