BLASTX nr result
ID: Rehmannia24_contig00017020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00017020
(654 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABU45207.1| unknown [Solanum bulbocastanum] 94 4e-17
gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata] 93 8e-17
gb|ABU45188.1| unknown [Capsicum frutescens] 91 2e-16
ref|XP_006363148.1| PREDICTED: pentatricopeptide repeat-containi... 90 5e-16
gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora] 89 9e-16
gb|AAG01123.1|AF273333_8 BAC19.8 [Solanum lycopersicum] 88 3e-15
ref|XP_004233512.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
ref|XP_002327818.1| predicted protein [Populus trichocarpa] gi|5... 87 3e-15
gb|EMJ03569.1| hypothetical protein PRUPE_ppa009261mg [Prunus pe... 87 4e-15
ref|XP_004232380.1| PREDICTED: pentatricopeptide repeat-containi... 87 4e-15
gb|ABU45173.1| unknown [Solanum melongena] 86 7e-15
ref|XP_006425713.1| hypothetical protein CICLE_v10025762mg [Citr... 84 4e-14
gb|EOX91145.1| Tetratricopeptide repeat (TPR)-like superfamily p... 83 6e-14
ref|XP_004300620.1| PREDICTED: pentatricopeptide repeat-containi... 83 6e-14
ref|XP_002310210.2| pentatricopeptide repeat-containing family p... 82 2e-13
gb|EXB59125.1| hypothetical protein L484_014620 [Morus notabilis] 77 4e-12
ref|XP_002866998.1| pentatricopeptide repeat-containing protein ... 75 2e-11
emb|CAA05629.1| membrane-associated salt-inducible protein like ... 75 2e-11
ref|NP_195386.1| pentatricopeptide repeat-containing protein [Ar... 75 2e-11
ref|XP_006282615.1| hypothetical protein CARUB_v10004839mg, part... 74 5e-11
>gb|ABU45207.1| unknown [Solanum bulbocastanum]
Length = 405
Score = 94.0 bits (232), Expect = 4e-17
Identities = 45/68 (66%), Positives = 54/68 (79%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SVKV KIP+F+TLKYLVEGLAKK + +AK M RT+ KKFPP L+KAW KI EELG
Sbjct: 334 VFKESVKVQKIPDFDTLKYLVEGLAKKSKLKDAKGMCRTVKKKFPPNLIKAWTKIEEELG 393
Query: 472 LAHVDVEE 449
LA + +
Sbjct: 394 LAKAEAPD 401
>gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 92.8 bits (229), Expect = 8e-17
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SV+V K+P+FNTLK LVEGL K+ + +AK M RT+ KKFPP L+KAW K+ EELG
Sbjct: 332 VFKESVRVNKMPDFNTLKCLVEGLVKREKLKDAKGMSRTVKKKFPPNLVKAWAKLEEELG 391
Query: 472 LAHVDVEEV--NSTG 434
LA V+V +V N+TG
Sbjct: 392 LAKVEVGDVVANATG 406
>gb|ABU45188.1| unknown [Capsicum frutescens]
Length = 373
Score = 91.3 bits (225), Expect = 2e-16
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SV+V KIP+FNTL+YLVEGL K+ + EAK M +T+ KKFPP L+KAW K+ EELG
Sbjct: 297 VFKESVRVNKIPDFNTLEYLVEGLVKRSKLNEAKRMSKTVKKKFPPNLVKAWTKLEEELG 356
Query: 472 LAHVD 458
LA V+
Sbjct: 357 LAEVE 361
>ref|XP_006363148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Solanum tuberosum]
Length = 406
Score = 90.1 bits (222), Expect = 5e-16
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SVKV KIP+FNTLKYLVEGL KK + +AK M RT+ KKFPP L+K W K+ EELG
Sbjct: 335 VFKESVKVQKIPDFNTLKYLVEGLVKKSMLKDAKGMSRTVKKKFPPNLVKDWTKLEEELG 394
Query: 472 LAHVDVEE 449
LA + +
Sbjct: 395 LAKAEAPD 402
>gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
Length = 417
Score = 89.4 bits (220), Expect = 9e-16
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SV V KIP+FNTLK+L+EGL K+ EAK MIRT+ KKFPP ++KAW ++ +ELG
Sbjct: 344 VFKESVAVHKIPDFNTLKHLLEGLVKRSKFKEAKGMIRTVKKKFPPNVVKAWERLQKELG 403
Query: 472 LAHVDVEEVN 443
L V+ EV+
Sbjct: 404 LVSVEANEVD 413
>gb|AAG01123.1|AF273333_8 BAC19.8 [Solanum lycopersicum]
Length = 167
Score = 87.8 bits (216), Expect = 3e-15
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SVKV KIP+F+TL YLVEGL KK + +AK M RT+ KKFPP L+KAW K+ EELG
Sbjct: 98 VFKESVKVQKIPDFDTLTYLVEGLVKKSKLKDAKGMSRTVKKKFPPNLVKAWTKLEEELG 157
Query: 472 LA 467
LA
Sbjct: 158 LA 159
>ref|XP_004233512.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Solanum lycopersicum]
Length = 416
Score = 87.4 bits (215), Expect = 3e-15
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VF++SV+ KIP+ NTLKYLV GLAK EAK MIRTM KKFP ++K W KI EELG
Sbjct: 339 VFRESVRANKIPDVNTLKYLVHGLAKSSKAKEAKEMIRTMKKKFPANVVKVWTKIEEELG 398
Query: 472 LAHVDVEEVNS 440
LA V++ ++ S
Sbjct: 399 LAKVELGDIKS 409
>ref|XP_002327818.1| predicted protein [Populus trichocarpa]
gi|566171087|ref|XP_006383229.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550338811|gb|ERP61026.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 397
Score = 87.4 bits (215), Expect = 3e-15
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
+FK+SV+V +IP+FNTLKYL EGLA+K M EAK +IRTM KKFPP LL AW K+ E LG
Sbjct: 323 LFKESVRVHRIPDFNTLKYLAEGLAEKKKMKEAKGLIRTMKKKFPPNLLNAWKKVEESLG 382
Query: 472 L 470
L
Sbjct: 383 L 383
>gb|EMJ03569.1| hypothetical protein PRUPE_ppa009261mg [Prunus persica]
Length = 299
Score = 87.0 bits (214), Expect = 4e-15
Identities = 45/87 (51%), Positives = 60/87 (68%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
+FK+SV+V KIP+FNT+++LVEGL KK M EAK +IRT+ KKFPP LL AW K+ E LG
Sbjct: 218 IFKRSVEVHKIPDFNTMRHLVEGLVKKKKMKEAKGLIRTIKKKFPPNLLVAWKKVEEGLG 277
Query: 472 LAHVDVEEVNSTGIEKVVDSDKIEKAS 392
LA D V D+D+ ++A+
Sbjct: 278 LASSD------RNASSVPDNDEAKEAT 298
>ref|XP_004232380.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Solanum lycopersicum]
Length = 405
Score = 87.0 bits (214), Expect = 4e-15
Identities = 41/68 (60%), Positives = 52/68 (76%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SVKV KIP+F+TL YLVEGL KK + +AK M RT+ KKFPP L+KAW K+ +ELG
Sbjct: 334 VFKESVKVQKIPDFDTLTYLVEGLVKKSKLKDAKGMSRTVKKKFPPNLVKAWTKLEKELG 393
Query: 472 LAHVDVEE 449
LA + +
Sbjct: 394 LAKAEAPD 401
>gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 86.3 bits (212), Expect = 7e-15
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VF++SV V KIP+F TLKYLVEGL KK +AK M RT+ KKFPP L+KAW K+ E+LG
Sbjct: 332 VFRESVSVHKIPDFITLKYLVEGLVKKSRWRDAKGMSRTVKKKFPPNLVKAWIKLEEDLG 391
Query: 472 LAHVDVEE---VNSTGIEKVVDSD 410
LA V+ + V ++ KV SD
Sbjct: 392 LAKVEASDNAKVEASDNAKVEASD 415
>ref|XP_006425713.1| hypothetical protein CICLE_v10025762mg [Citrus clementina]
gi|568824774|ref|XP_006466769.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Citrus sinensis]
gi|557527703|gb|ESR38953.1| hypothetical protein
CICLE_v10025762mg [Citrus clementina]
Length = 403
Score = 84.0 bits (206), Expect = 4e-14
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SV V KIP+FNT+K LVEGL KK + EAK +IRT+ KKFPP +L+AW K+ EELG
Sbjct: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELG 388
Query: 472 L 470
L
Sbjct: 389 L 389
>gb|EOX91145.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 411
Score = 83.2 bits (204), Expect = 6e-14
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SV++ KIP+FNTLK+LVEGL K + EAK +IRT+ KKFPP L AW K+ EELG
Sbjct: 333 VFKESVRLHKIPDFNTLKHLVEGLVKNKKIKEAKGLIRTVKKKFPPNFLNAWKKLEEELG 392
Query: 472 L 470
L
Sbjct: 393 L 393
>ref|XP_004300620.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 461
Score = 83.2 bits (204), Expect = 6e-14
Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 12/87 (13%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SV++ KIP+FNTL++L EGL KK EAK +IRT+ KKFPP +L AW K+ E LG
Sbjct: 326 VFKKSVEMRKIPDFNTLRFLAEGLMKKNMRKEAKGLIRTVKKKFPPNVLNAWKKVEEGLG 385
Query: 472 LA----------HVDVEEV--NSTGIE 428
L H D EEV +STGI+
Sbjct: 386 LVPDELDSSCVPHDDGEEVTSSSTGID 412
>ref|XP_002310210.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334733|gb|EEE90660.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 396
Score = 81.6 bits (200), Expect = 2e-13
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
+FK SVKV +IP+FNTLKYLV+GL +K + EAK +IRTM KKFP LL AW K+ E LG
Sbjct: 322 IFKDSVKVHRIPDFNTLKYLVKGLVEKKKIKEAKGLIRTMKKKFPLNLLNAWKKVEENLG 381
Query: 472 L 470
L
Sbjct: 382 L 382
>gb|EXB59125.1| hypothetical protein L484_014620 [Morus notabilis]
Length = 400
Score = 77.0 bits (188), Expect = 4e-12
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
VFK+SV + KIP+FNT+K LVEGL KK + EA+ M+RT+ KKFP +L +W K+ E LG
Sbjct: 322 VFKKSVMMHKIPDFNTIKILVEGLVKKKKIREARGMLRTIKKKFPANVLNSWKKVEESLG 381
Query: 472 LA 467
LA
Sbjct: 382 LA 383
>ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312834|gb|EFH43257.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 411
Score = 75.1 bits (183), Expect = 2e-11
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
+FK+SV + KIP+FNTLK+L GL +K + +AK +IRT+ KKFPP + AW K+ EELG
Sbjct: 335 IFKKSVYMHKIPDFNTLKHLAVGLVEKKKIDDAKGLIRTVKKKFPPSFMNAWKKLEEELG 394
Query: 472 L 470
L
Sbjct: 395 L 395
>emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 74.7 bits (182), Expect = 2e-11
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
+FK+SV + KIP+FNTLK+LV GL + +AK +IRT+ KKFPP L AW K+ EELG
Sbjct: 351 IFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELG 410
Query: 472 L 470
L
Sbjct: 411 L 411
>ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein
[Arabidopsis thaliana] gi|7270616|emb|CAB80334.1|
salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680
[Arabidopsis thaliana] gi|24111267|gb|AAN46757.1|
At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 74.7 bits (182), Expect = 2e-11
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
+FK+SV + KIP+FNTLK+LV GL + +AK +IRT+ KKFPP L AW K+ EELG
Sbjct: 335 IFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELG 394
Query: 472 L 470
L
Sbjct: 395 L 395
>ref|XP_006282615.1| hypothetical protein CARUB_v10004839mg, partial [Capsella rubella]
gi|482551320|gb|EOA15513.1| hypothetical protein
CARUB_v10004839mg, partial [Capsella rubella]
Length = 435
Score = 73.6 bits (179), Expect = 5e-11
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = -3
Query: 652 VFKQSVKVGKIPEFNTLKYLVEGLAKKGHMTEAKAMIRTMNKKFPPELLKAWGKIMEELG 473
+FK+SV + KIP+FNTLK+L GL + +AK +IRT+ KKFPP + AW K+ EELG
Sbjct: 362 IFKKSVYMNKIPDFNTLKHLAAGLVANKKIDDAKGLIRTVKKKFPPSFMNAWKKLEEELG 421
Query: 472 L 470
L
Sbjct: 422 L 422