BLASTX nr result
ID: Rehmannia24_contig00016421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00016421
(894 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK44121.1|AF370306_1 putative retroelement pol polyprotein [... 77 9e-12
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 77 9e-12
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 74 9e-11
ref|XP_002329064.1| predicted protein [Populus trichocarpa] 73 1e-10
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 73 2e-10
ref|XP_002331884.1| predicted protein [Populus trichocarpa] 72 2e-10
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana] 72 3e-10
gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana] 72 3e-10
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 72 3e-10
ref|XP_004240325.1| PREDICTED: uncharacterized protein LOC101250... 72 4e-10
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 72 4e-10
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 71 6e-10
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 70 8e-10
emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera] 70 1e-09
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 70 1e-09
emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera] 69 3e-09
ref|XP_006428285.1| hypothetical protein CICLE_v10013389mg, part... 68 4e-09
gb|EPS74051.1| hypothetical protein M569_00705, partial [Genlise... 68 4e-09
emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera] 68 4e-09
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ... 68 5e-09
>gb|AAK44121.1|AF370306_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|17104755|gb|AAL34266.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|51971701|dbj|BAD44515.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|51971723|dbj|BAD44526.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|110741320|dbj|BAF02210.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 405
Score = 77.0 bits (188), Expect = 9e-12
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = -2
Query: 794 VTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSE-NVADPAD 618
V ++N +N V L T+ NY WK Q + QGLLGF+ G+ PS+ +V D
Sbjct: 16 VPSLNISNCVTVTL----TAKNYILWKSQFESFLDGQGLLGFVTGSIPAPSQTSVVSDID 71
Query: 617 GTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
G+T A N +Y W +TD +VK W+L S +D++ + TS ++W+ + N F
Sbjct: 72 GSTSAS-PNPEYYTWFKTDRVVKSWLLGSFLEDILSVVVNCNTSHEVWISVANHF 125
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 77.0 bits (188), Expect = 9e-12
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = -2
Query: 794 VTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSE-NVADPAD 618
V ++N +N V L T+ NY WK Q + QGLLGF+ G+ PS+ +V D
Sbjct: 6 VPSLNISNCVTVTL----TAKNYILWKSQFESFLDGQGLLGFVTGSIPAPSQTSVVSDID 61
Query: 617 GTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
G+T A N +Y W +TD +VK W+L S +D++ + TS ++W+ + N F
Sbjct: 62 GSTSAS-PNPEYYTWFKTDRVVKSWLLGSFLEDILSVVVNCNTSHEVWISVANHF 115
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 73.6 bits (179), Expect = 9e-11
Identities = 37/112 (33%), Positives = 57/112 (50%)
Frame = -2
Query: 788 TVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADGTT 609
++N +N V KL T NY WK Q + QGLLGF++G A P+ V+ P D
Sbjct: 12 SLNISNCVTVKL----TDRNYILWKSQFESFLSGQGLLGFVNGAYAAPTGTVSGPQDAGV 67
Query: 608 VAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
+ N DY W R+D +V +++D++ + KTS ++W+ L F
Sbjct: 68 TEAIPNPDYQAWFRSDQVV-------MSEDILSVVVGSKTSHEVWMNLAKHF 112
>ref|XP_002329064.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 73.2 bits (178), Expect = 1e-10
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Frame = -2
Query: 833 MATSNVXXXXQPWVTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGT- 657
MA+S+ P T+ + +P + S+NY WK Q++ L G++DGT
Sbjct: 1 MASSSSSNSTTP--PTIPTLSNLPFTMTIKLHSSNYPVWKAQVVPYFCGHDLYGYLDGTI 58
Query: 656 NAPPSE-NVADPADGTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRD 480
+ PP E N++D GT+ + N Y W+R D L+ I SL +DV+ + ++ TSR+
Sbjct: 59 SIPPKELNISDSTSGTS-QTIPNPLYHQWLRQDSLILATINSSLTEDVLTQVMSYTTSRE 117
Query: 479 IWVELENRF 453
+W+ LEN F
Sbjct: 118 VWLALENNF 126
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 72.8 bits (177), Expect = 2e-10
Identities = 37/95 (38%), Positives = 55/95 (57%)
Frame = -2
Query: 737 STNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADGTTVAVVKNQDYDLWIRTDM 558
S NY AWK Q L L++ L+GFIDGT A P ++ A + N Y +W + D+
Sbjct: 28 SHNYLAWKMQFLNLLRGHDLMGFIDGTEACPPKHTASGS--------LNPAYVVWQKKDV 79
Query: 557 LVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
+ GWIL SL++ +V T+ +TS+ +W L+ RF
Sbjct: 80 CLLGWILASLSEKLVSTIYGLETSKQVWTALQTRF 114
>ref|XP_002331884.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 72.4 bits (176), Expect = 2e-10
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = -2
Query: 767 VPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADGTTVAVVK-- 594
+P L +NY WK Q L QG+ G++DGT P + + D TT A+ K
Sbjct: 24 LPLTLSVKLNHSNYPVWKAQALLYFHGQGVFGYLDGTIQIPPQEI-DAPHPTTGAITKIP 82
Query: 593 NQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
N +YD W+R D L+ I SL +DV+ + ++ TS+++W+ L+ F
Sbjct: 83 NPEYDHWLRQDSLILATINTSLTEDVLSQIMSYTTSKNVWLALQRNF 129
>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
Length = 1309
Score = 72.0 bits (175), Expect = 3e-10
Identities = 39/116 (33%), Positives = 61/116 (52%)
Frame = -2
Query: 800 PWVTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPA 621
P+ V+ ++ V KL +NY WK Q L+ SQ L+GF++G PP++
Sbjct: 6 PFPDNVHVSSSVTLKL----NDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVN 61
Query: 620 DGTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
D T + V N Y+ W TD LV+ W+ +L+++V+ + TSR IW+ L F
Sbjct: 62 DDVT-SEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENF 116
>gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana]
Length = 361
Score = 72.0 bits (175), Expect = 3e-10
Identities = 39/116 (33%), Positives = 61/116 (52%)
Frame = -2
Query: 800 PWVTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPA 621
P+ V+ ++ V KL +NY WK Q L+ SQ L+GF++G PP++
Sbjct: 71 PFPDNVHVSSSVTLKL----NDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVN 126
Query: 620 DGTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
D T + V N Y+ W TD LV+ W+ +L+++V+ + TSR IW+ L F
Sbjct: 127 DDVT-SEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENF 181
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 72.0 bits (175), Expect = 3e-10
Identities = 39/116 (33%), Positives = 61/116 (52%)
Frame = -2
Query: 800 PWVTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPA 621
P+ V+ ++ V KL +NY WK Q L+ SQ L+GF++G PP++
Sbjct: 6 PFPDNVHVSSSVTLKL----NDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVN 61
Query: 620 DGTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
D T + V N Y+ W TD LV+ W+ +L+++V+ + TSR IW+ L F
Sbjct: 62 DDVT-SEVPNPQYEDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENF 116
>ref|XP_004240325.1| PREDICTED: uncharacterized protein LOC101250994 [Solanum
lycopersicum]
Length = 480
Score = 71.6 bits (174), Expect = 4e-10
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 10/124 (8%)
Frame = -2
Query: 794 VTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADG 615
++TVN ANFV KL +NY WK Q++CL+QS L GF+DGT P +A P DG
Sbjct: 12 LSTVNVANFVSIKLC---GKSNYIPWKTQIVCLLQSHDLFGFVDGTIRFPLLTIA-PGDG 67
Query: 614 --------TTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFK--TSRDIWVEL 465
+ ++DY R+D VKGWI SL+D+++ K ++R+IW+ L
Sbjct: 68 DGDDDEPEEEEEMGIDEDYLQRKRSDGFVKGWIFGSLSDELLQDKAVHKLDSAREIWLVL 127
Query: 464 ENRF 453
E +
Sbjct: 128 EELY 131
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 71.6 bits (174), Expect = 4e-10
Identities = 37/116 (31%), Positives = 60/116 (51%)
Frame = -2
Query: 800 PWVTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPA 621
P+ V+ ++ V KL +NY WK Q L+ L+GF++G PP + +
Sbjct: 6 PFPDNVHVSSSVTLKL----NDSNYLLWKTQFESLLSCHKLIGFVNGGITPPPRTL-NVV 60
Query: 620 DGTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
G T V N Y+ W TD L++ W+ +L+++V+ + +TSRDIW+ L F
Sbjct: 61 TGDTSVDVANPQYESWFCTDQLIRSWLFGTLSEEVLGYVHNLQTSRDIWISLAENF 116
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 70.9 bits (172), Expect = 6e-10
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Frame = -2
Query: 800 PWVTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGT-NAPPSENVADP 624
P+ V+ + V KL T +NY WK Q L+ SQ L+GF++G NAP +
Sbjct: 6 PFPDNVHVTSSVTLKL----TDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLV-- 59
Query: 623 ADGTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF--- 453
+G + N Y+ W TD LV+ W+ +L+++V+ + TSR IWV L F
Sbjct: 60 VNGEVTSEEPNPLYESWFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKS 119
Query: 452 ---RTYLLPQGLLLV 417
R + L Q L L+
Sbjct: 120 SVAREFSLRQNLQLL 134
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 70.5 bits (171), Expect = 8e-10
Identities = 36/107 (33%), Positives = 52/107 (48%)
Frame = -2
Query: 773 NFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADGTTVAVVK 594
N V KL T NY WK Q + Q LLGF+ G+ P+ + P T
Sbjct: 18 NAVTVKL----TEKNYILWKRQFEAFLNGQRLLGFVTGSTPQPAATIPAPTINGTTTPAP 73
Query: 593 NQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
N DY LW +TD ++ W+L S ++DV ++ S +IW+ L + F
Sbjct: 74 NPDYALWFQTDQAIQSWLLGSFSEDVQSSVIHCTNSYEIWMTLASHF 120
>emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]
Length = 752
Score = 70.1 bits (170), Expect = 1e-09
Identities = 42/114 (36%), Positives = 62/114 (54%)
Frame = -2
Query: 794 VTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADG 615
+ ++NA +P KL S N+ WK Q L+ L+GF+DGT PS+ + G
Sbjct: 23 IISINAXTQLPIKL----NSNNFPFWKAQFDALLYGYDLMGFLDGTKTCPSKEIIVEY-G 77
Query: 614 TTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
TTV+ N ++ +WIR D L+ IL SL+ VV + T +SRD WV+L +
Sbjct: 78 TTVS---NPNFSIWIRQDKLLLHAILASLSKGVVPLIATATSSRDAWVKLHKLY 128
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 69.7 bits (169), Expect = 1e-09
Identities = 40/114 (35%), Positives = 62/114 (54%)
Frame = -2
Query: 794 VTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADG 615
+ ++NA +P KL + N+ +WK Q L+ L+GF+DG PS+ + DG
Sbjct: 23 IISINATAQLPIKL----NNNNFPSWKAQFDALLYGYDLMGFLDGNKTCPSKEII-AEDG 77
Query: 614 TTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
TTV+ N D+ +W R D L+ IL SL++ VV + +SRD WV+L +
Sbjct: 78 TTVS---NPDFVIWTRQDKLLLHAILASLSEGVVPLIAAATSSRDAWVKLHKLY 128
>emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera]
Length = 1412
Score = 68.6 bits (166), Expect = 3e-09
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = -2
Query: 788 TVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTN-APPSENVAD---PA 621
++N NF+ KL + TNY W+EQ L L +SQ LLG + + APP + D
Sbjct: 5 SLNVGNFITLKL----SPTNYPLWREQALALAESQELLGHLTNEDPAPPQYTIPDFNNTP 60
Query: 620 DGTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
T A K + Y W + D L++GWI+ +L+++ + T+ D+W L+N +
Sbjct: 61 TAKTSAPRKTEAYIAWRKADRLLRGWIIGTLSEETLGLAVGLDTANDVWEALKNAY 116
>ref|XP_006428285.1| hypothetical protein CICLE_v10013389mg, partial [Citrus clementina]
gi|557530342|gb|ESR41525.1| hypothetical protein
CICLE_v10013389mg, partial [Citrus clementina]
Length = 127
Score = 68.2 bits (165), Expect = 4e-09
Identities = 40/116 (34%), Positives = 61/116 (52%)
Frame = -2
Query: 800 PWVTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPA 621
P+ +T+N +NFV KL T NY WK Q+ LI+SQ + F+ V A
Sbjct: 15 PYPSTLNISNFVSLKL----TQNNYMLWKTQISGLIESQDMGEFV------LKSTVEAEA 64
Query: 620 DGTTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
T V N DY +W R+D L++GWI+ +L+++V+ + +TS +W L F
Sbjct: 65 STTKQEYVMNYDYIMWRRSDRLLRGWIVGTLSEEVLGLVVGIETSAAVWKALSEYF 120
>gb|EPS74051.1| hypothetical protein M569_00705, partial [Genlisea aurea]
Length = 105
Score = 68.2 bits (165), Expect = 4e-09
Identities = 33/106 (31%), Positives = 58/106 (54%)
Frame = -2
Query: 791 TTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADGT 612
T ++ +NF+ TKL STNY W E + L +SQGL G + G + P++ + A+G+
Sbjct: 5 TNISVSNFISTKL----VSTNYPQWSEMAMGLAESQGLAGHLTGESPAPAQFITSTAEGS 60
Query: 611 TVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIW 474
+V N + W D L++ W+L +++D+V + T+ +W
Sbjct: 61 SVTST-NPSFTKWKTADRLLRSWLLSTISDEVWPLIAGCTTAEMVW 105
>emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera]
Length = 787
Score = 68.2 bits (165), Expect = 4e-09
Identities = 35/96 (36%), Positives = 55/96 (57%)
Frame = -2
Query: 740 TSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADGTTVAVVKNQDYDLWIRTD 561
+S+NY WK Q+L L++SQ LLG++DGT PP +PA TT++ Y W D
Sbjct: 23 SSSNYLLWKSQLLPLLESQDLLGYVDGTLVPPPR--FEPATSTTLST----KYLAWKAAD 76
Query: 560 MLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRF 453
+ +L SL ++ + + T+R++W+ LEN F
Sbjct: 77 QRLLCLLLSSLTEEAIAAVVGLSTAREVWLALENTF 112
>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268350|emb|CAB78643.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 1942
Score = 67.8 bits (164), Expect = 5e-09
Identities = 37/116 (31%), Positives = 58/116 (50%)
Frame = -2
Query: 794 VTTVNAANFVPTKLWFNNTSTNYQAWKEQMLCLIQSQGLLGFIDGTNAPPSENVADPADG 615
V +N +N V L T NY WK Q + QGLLGF+ G+ + PS + P
Sbjct: 16 VPQLNISNCVTVTL----TQQNYILWKSQFESFLSGQGLLGFVTGSISAPSPTIPVPDIN 71
Query: 614 TTVAVVKNQDYDLWIRTDMLVKGWILCSLNDDVVYTLPTFKTSRDIWVELENRFRT 447
N ++D+W +TD +VK W+L S +D++ + + T+ EL+ R +T
Sbjct: 72 GVTTDRPNPEFDVWFKTDKVVKSWLLGSFAEDILSVVVNYVTAH----ELQRRLQT 123