BLASTX nr result

ID: Rehmannia24_contig00016388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00016388
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312904.2| hypothetical protein POPTR_0009s14810g, part...    62   1e-07
ref|XP_002269369.1| PREDICTED: uncharacterized protein LOC100258...    58   1e-06

>ref|XP_002312904.2| hypothetical protein POPTR_0009s14810g, partial [Populus
           trichocarpa] gi|550331745|gb|EEE86859.2| hypothetical
           protein POPTR_0009s14810g, partial [Populus trichocarpa]
          Length = 457

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
 Frame = -3

Query: 239 VLGGQREFASSSLFLTDFVAGLKGTQLGSSN---NFQYVNLKCASGLDGR*VVCKR 81
           VLGG++EFASS++F TD        Q  SSN   NF++ NL CASG+DGR VVCKR
Sbjct: 402 VLGGEKEFASSNIFATDCAVARFSGQHPSSNSSENFEFANLHCASGIDGRGVVCKR 457


>ref|XP_002269369.1| PREDICTED: uncharacterized protein LOC100258455 [Vitis vinifera]
          Length = 442

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
 Frame = -3

Query: 263 VMLCVGEAVLGGQREFASSSLFLTDFVAGLKGTQLGSSNN------FQYVNLKCASGLDG 102
           V + V   +LGG++EFASS LF TD        +L S ++      F+Y NL C SG+DG
Sbjct: 376 VKMGVAMPILGGEKEFASSGLFTTDCAVARFSGRLPSGDDAYSLEKFEYANLNCVSGIDG 435

Query: 101 R*VVCKR 81
           R VVCKR
Sbjct: 436 RGVVCKR 442


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