BLASTX nr result

ID: Rehmannia24_contig00016350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00016350
         (371 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233516.1| PREDICTED: F-box protein At5g49610-like isof...    57   2e-06

>ref|XP_004233516.1| PREDICTED: F-box protein At5g49610-like isoform 1 [Solanum
           lycopersicum] gi|460375446|ref|XP_004233517.1|
           PREDICTED: F-box protein At5g49610-like isoform 2
           [Solanum lycopersicum]
          Length = 407

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +3

Query: 6   ICSGMELSLKRLMSVRIGPALDHITGYRVLPCPDGDTVMILVRCFIYSFSIGDRSIRVVS 185
           I  GME+SLKR +S+ +GP        +VLPC + DTV I VR  IY + I  R  +V S
Sbjct: 321 IYQGMEMSLKRSVSINLGPERGLTCACKVLPCVNSDTVAIQVREHIYLYHI--REQKVES 378

Query: 186 RVASDSVG-ADKYLAYVNSLVH 248
             + +++G A ++L Y+NSL +
Sbjct: 379 IASPNAIGPAKRFLPYINSLAN 400


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