BLASTX nr result
ID: Rehmannia24_contig00016302
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00016302
(1271 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS69003.1| hypothetical protein M569_05766, partial [Genlise... 264 5e-68
ref|XP_006361687.1| PREDICTED: zinc finger CCHC-type and RNA-bin... 244 5e-62
ref|XP_004250046.1| PREDICTED: uncharacterized protein LOC101266... 242 2e-61
ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arab... 236 2e-59
ref|XP_006300227.1| hypothetical protein CARUB_v10016463mg [Caps... 235 3e-59
ref|NP_187651.1| U12-type spliceosomal protein U11/U12 [Arabidop... 235 3e-59
ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus... 233 2e-58
ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin... 232 2e-58
dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana] 231 5e-58
ref|XP_002315325.2| hypothetical protein POPTR_0010s23420g [Popu... 223 1e-55
gb|EOY18808.1| RNA recognition motif and CCHC-type zinc finger d... 223 2e-55
ref|XP_006436503.1| hypothetical protein CICLE_v10032576mg [Citr... 222 3e-55
gb|EOY18810.1| RNA recognition motif and CCHC-type zinc finger d... 222 3e-55
ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-bin... 218 3e-54
ref|XP_006407573.1| hypothetical protein EUTSA_v10021363mg [Eutr... 218 4e-54
ref|XP_004308765.1| PREDICTED: zinc finger CCHC-type and RNA-bin... 218 4e-54
ref|XP_004149837.1| PREDICTED: zinc finger CCHC-type and RNA-bin... 217 7e-54
tpg|DAA62644.1| TPA: RNA binding protein [Zea mays] 217 7e-54
gb|EMJ19402.1| hypothetical protein PRUPE_ppa010566mg [Prunus pe... 216 1e-53
gb|EXB96201.1| Zinc finger CCHC-type and RNA-binding motif-conta... 216 2e-53
>gb|EPS69003.1| hypothetical protein M569_05766, partial [Genlisea aurea]
Length = 224
Score = 264 bits (675), Expect = 5e-68
Identities = 146/249 (58%), Positives = 158/249 (63%)
Frame = +3
Query: 72 NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLTNSD 251
NY EEDDTFFYRY LAPSKST+YVSN+DYNLTNSD
Sbjct: 3 NYEQGEEDDTFFYRYSSAAAAAPKPSSRPGGSGG-----LAPSKSTLYVSNIDYNLTNSD 57
Query: 252 LHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASI 431
LHTIFSTFGK+ KVTVLKDRVTRQSKGVAFV+FV+R+DAVKAVKGMDKK+LNGRTLRASI
Sbjct: 58 LHTIFSTFGKIGKVTVLKDRVTRQSKGVAFVMFVSREDAVKAVKGMDKKVLNGRTLRASI 117
Query: 432 AADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXXXX 611
AADNGRA EFI+K+ YKDKSRCYECGEEGHLSYECP+NFLGPRERPVA
Sbjct: 118 AADNGRAAEFIKKRAYKDKSRCYECGEEGHLSYECPKNFLGPRERPVAKKGRRSGGGREE 177
Query: 612 XXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXXXXX 791
E + NWASVV G + E
Sbjct: 178 KEQVEEEADF-----------LADNWASVVVGGEEGVEN-----------EGRKKEKRKG 215
Query: 792 YFSDESDED 818
YFSDESDED
Sbjct: 216 YFSDESDED 224
>ref|XP_006361687.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Solanum tuberosum]
Length = 275
Score = 244 bits (623), Expect = 5e-62
Identities = 142/269 (52%), Positives = 159/269 (59%), Gaps = 22/269 (8%)
Frame = +3
Query: 81 DDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX-----------LAPSKSTVYVSNV 227
DD+EDDTF+YRY LAPSKSTVYVSN+
Sbjct: 10 DDDEDDTFYYRYSSAPSPAPSSSATSKNVSTSKSSHGGGGGSSGSGGLAPSKSTVYVSNL 69
Query: 228 DYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILN 407
DY LTNSDLHTIFSTFGKVAKVTV+KDRVTR+S+GVAF+LFV+R+DA+KAVKG+DKK+LN
Sbjct: 70 DYTLTNSDLHTIFSTFGKVAKVTVVKDRVTRKSRGVAFILFVSREDAIKAVKGIDKKVLN 129
Query: 408 GRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPV----- 572
GRTL ASIA+DNGRA EFIRKKVYKDKSRCYECGEEGHLSYECP+N LGPRERP
Sbjct: 130 GRTLTASIASDNGRAAEFIRKKVYKDKSRCYECGEEGHLSYECPKNLLGPRERPEPPKKG 189
Query: 573 ------AXXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLL 734
+ NWASVVD A+ERLL
Sbjct: 190 RRGGGGGGGGGGKGGDEGRGGEWEDDEEEEEADDEGGARFDDDNWASVVD--RGAEERLL 247
Query: 735 XXXXXXXXXXXXXXXXXXXYFSDESDEDD 821
YFSDESDE+D
Sbjct: 248 -KGDNDEFKKEARKDKRKGYFSDESDEED 275
>ref|XP_004250046.1| PREDICTED: uncharacterized protein LOC101266891 [Solanum
lycopersicum]
Length = 272
Score = 242 bits (618), Expect = 2e-61
Identities = 140/266 (52%), Positives = 157/266 (59%), Gaps = 19/266 (7%)
Frame = +3
Query: 81 DDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------------LAPSKSTVYVSN 224
DD+EDDTF+YRY LAPSKSTVYVSN
Sbjct: 10 DDDEDDTFYYRYSSAPSPAPSSSSVTSKNVSISKSSHGGGGGISGSGGLAPSKSTVYVSN 69
Query: 225 VDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKIL 404
+DY LTNSDLHTIFS FGKVAKVTV+KDRVTR+S+GVAF+LF++R+DA+KAVKG+DKK+L
Sbjct: 70 LDYTLTNSDLHTIFSNFGKVAKVTVVKDRVTRKSRGVAFILFISREDAIKAVKGIDKKLL 129
Query: 405 NGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPV---- 572
NGRTL ASIA+DNGRA EFIRKKVYKDKSRCYECGEEGHLSYECP+N GPRERP
Sbjct: 130 NGRTLTASIASDNGRAAEFIRKKVYKDKSRCYECGEEGHLSYECPKNLFGPRERPEPPKK 189
Query: 573 ---AXXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXX 743
E NWASVVD A+ERLL
Sbjct: 190 GRRGGGGGKRGDEGRGGEWEDDEEEEDEADDEGGARFADDNWASVVD--RGAEERLL-KG 246
Query: 744 XXXXXXXXXXXXXXXXYFSDESDEDD 821
YFSDESDE+D
Sbjct: 247 DNDEFKKEARKEKRKGYFSDESDEED 272
>ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata] gi|297328506|gb|EFH58925.1| hypothetical protein
ARALYDRAFT_897216 [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 236 bits (601), Expect = 2e-59
Identities = 133/255 (52%), Positives = 157/255 (61%), Gaps = 7/255 (2%)
Frame = +3
Query: 78 SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSNVDYNL 239
SDDEEDDTF+YRY LAPSKST+YVSN+D++L
Sbjct: 9 SDDEEDDTFYYRYSSVAAPPPSNPRQPSSSSAKSSAPGGGSGGLAPSKSTLYVSNLDFSL 68
Query: 240 TNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTL 419
TNSD+HT+FSTFGKVA+VTVLKDR TRQS+GVAFVL+V+R+DA KA + MD KILNGR L
Sbjct: 69 TNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKL 128
Query: 420 RASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXX 599
SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECP+N LGPRERP
Sbjct: 129 TVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGRRK 188
Query: 600 XXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERL-LXXXXXXXXXXXXXX 776
+++ NWASVVD E A ERL +
Sbjct: 189 EDEGEAEEIRDWS----AAPSLEGFEEENWASVVDNE--AGERLRMREAEEEEERRKKRK 242
Query: 777 XXXXXYFSDESDEDD 821
YFSDESD++D
Sbjct: 243 EKKVSYFSDESDDED 257
>ref|XP_006300227.1| hypothetical protein CARUB_v10016463mg [Capsella rubella]
gi|482568936|gb|EOA33125.1| hypothetical protein
CARUB_v10016463mg [Capsella rubella]
Length = 260
Score = 235 bits (600), Expect = 3e-59
Identities = 134/256 (52%), Positives = 158/256 (61%), Gaps = 6/256 (2%)
Frame = +3
Query: 72 NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX----LAPSKSTVYVSNVDYNL 239
++SDDEEDDTF+YRY LAPSKST+YVSN+D++L
Sbjct: 7 HHSDDEEDDTFYYRYSSVAAPPPSNPKQPSSSAKSSAPGGSGGLAPSKSTLYVSNLDFSL 66
Query: 240 TNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTL 419
TNSD+HT+FSTFGKVA+VTVLKDR TR+S+GVAFVL+V+R+DA KA MD KILNGR L
Sbjct: 67 TNSDIHTLFSTFGKVARVTVLKDRHTRRSRGVAFVLYVSREDAAKASGSMDGKILNGRKL 126
Query: 420 RASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXX 599
SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECPRN LGPRERP
Sbjct: 127 TVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPPPPKKRGRRK 186
Query: 600 XXXXXXXXXYEYN-LXXXXXXXXXXXXXXNWASVVDGEDAAKERL-LXXXXXXXXXXXXX 773
E++ NWASVVD E A ERL +
Sbjct: 187 EDGGEAEETREWSAAPPSLAVAEETFEEENWASVVDNE--AGERLRMREAEEEEERRKKR 244
Query: 774 XXXXXXYFSDESDEDD 821
YFSDESD++D
Sbjct: 245 KEKKVSYFSDESDDED 260
>ref|NP_187651.1| U12-type spliceosomal protein U11/U12 [Arabidopsis thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical
protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis
thaliana] gi|61656137|gb|AAX49371.1| At3g10400
[Arabidopsis thaliana] gi|332641379|gb|AEE74900.1|
U12-type spliceosomal protein U11/U12 [Arabidopsis
thaliana]
Length = 261
Score = 235 bits (599), Expect = 3e-59
Identities = 133/257 (51%), Positives = 155/257 (60%), Gaps = 7/257 (2%)
Frame = +3
Query: 72 NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSNVDY 233
++SDDEEDDTF+YRY LAPSKST+YVSN+D+
Sbjct: 7 HHSDDEEDDTFYYRYSSVAAPPPSNPKHQPSSSAKSSAPGGGSGGLAPSKSTLYVSNLDF 66
Query: 234 NLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGR 413
+LTNSD+HT+FSTFGKVA+VTVLKDR TRQS+GVAFVL+V+R+DA KA + MD KILNGR
Sbjct: 67 SLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGR 126
Query: 414 TLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXX 593
L SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECP+N LGPRERP
Sbjct: 127 KLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGR 186
Query: 594 XXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERL-LXXXXXXXXXXXX 770
NWASVVD E A ERL
Sbjct: 187 RKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNE--AGERLRKREAEEEEERRMK 244
Query: 771 XXXXXXXYFSDESDEDD 821
YFSDESD++D
Sbjct: 245 RKEKKVSYFSDESDDED 261
>ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
gi|223530928|gb|EEF32787.1| RNA binding motif protein,
putative [Ricinus communis]
Length = 217
Score = 233 bits (593), Expect = 2e-58
Identities = 116/166 (69%), Positives = 132/166 (79%), Gaps = 1/166 (0%)
Frame = +3
Query: 81 DDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX-LAPSKSTVYVSNVDYNLTNSDLH 257
DD++DDTF+YRY LAPSKSTVYVSN+DY+LTNSDLH
Sbjct: 9 DDDDDDTFYYRYSSTSTSTLSSLNQKNPKSKSNGSGGLAPSKSTVYVSNLDYSLTNSDLH 68
Query: 258 TIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASIAA 437
T+FSTFGK+A+VTVLKD+ +RQSKGVAF+ FV+RDDAV A K MDKKILNGRTL ASIA+
Sbjct: 69 TLFSTFGKIARVTVLKDKQSRQSKGVAFIQFVSRDDAVSAAKQMDKKILNGRTLSASIAS 128
Query: 438 DNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVA 575
DNGRA EFI+K+VYKDKSRCYECGE GHLSYECP+N LGPRERPVA
Sbjct: 129 DNGRAAEFIKKRVYKDKSRCYECGEIGHLSYECPKNQLGPRERPVA 174
>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
hypothetical protein VITISV_022491 [Vitis vinifera]
Length = 250
Score = 232 bits (592), Expect = 2e-58
Identities = 133/252 (52%), Positives = 151/252 (59%), Gaps = 2/252 (0%)
Frame = +3
Query: 72 NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX--LAPSKSTVYVSNVDYNLTN 245
N SD EED+T +YRY LAPSKSTVYVSN+DY LTN
Sbjct: 5 NNSDSEEDETLYYRYASSSIPNPNPKSNSSKLQKRSSGSGSLAPSKSTVYVSNLDYTLTN 64
Query: 246 SDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRA 425
SDL TIFSTFGKVAKVT+LKDR TR S+GVAFVLFV+RD+A+ A + M+ K+LN RTL A
Sbjct: 65 SDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAAREMNGKVLNKRTLTA 124
Query: 426 SIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXX 605
SIAADNGRA EFIR++VYKDKSRCYECGE GHLSYECPRN LGPRERPV
Sbjct: 125 SIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLSYECPRNQLGPRERPVPKRSRRGQGGS 184
Query: 606 XXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXXX 785
++ NWASVVD A +RLL
Sbjct: 185 EARQNGDHD----NGGSDGGEAFEDDNWASVVD--TGADQRLLKGSEGLEMRKKGKKEKK 238
Query: 786 XXYFSDESDEDD 821
YFSDESDE++
Sbjct: 239 ASYFSDESDEEE 250
>dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 231 bits (589), Expect = 5e-58
Identities = 132/257 (51%), Positives = 153/257 (59%), Gaps = 7/257 (2%)
Frame = +3
Query: 72 NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSNVDY 233
++SDDEEDDTF+YRY LAPSKST+YVSN+D+
Sbjct: 7 HHSDDEEDDTFYYRYSSVAAPPPSNPKHQPSSSAKSSAPGGGSGGLAPSKSTLYVSNLDF 66
Query: 234 NLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGR 413
+LTNSD+HT+FSTFGKVA+VTVLKDR TRQS+GVAFVL+V R+DA KA + MD KILNGR
Sbjct: 67 SLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAARSMDAKILNGR 126
Query: 414 TLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXX 593
L SIAADNG A+EFI+K+VYKDKSRCYECG+EGHLSYECP+N LGPRERP
Sbjct: 127 KLTVSIAADNGLASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGR 186
Query: 594 XXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERL-LXXXXXXXXXXXX 770
NWASVVD E A ERL
Sbjct: 187 RKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNE--AGERLRKREAEEEEERRMK 244
Query: 771 XXXXXXXYFSDESDEDD 821
YFSDESD++D
Sbjct: 245 RKEKKVSYFSDESDDED 261
>ref|XP_002315325.2| hypothetical protein POPTR_0010s23420g [Populus trichocarpa]
gi|550330442|gb|EEF01496.2| hypothetical protein
POPTR_0010s23420g [Populus trichocarpa]
Length = 246
Score = 223 bits (569), Expect = 1e-55
Identities = 128/248 (51%), Positives = 151/248 (60%)
Frame = +3
Query: 78 SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLTNSDLH 257
SD +ED+ F++RY LAPSKST+YVSN+D++LTNSDLH
Sbjct: 9 SDSDEDEIFYHRYSSATTSSQHPPSSTKPHGGSGG--LAPSKSTLYVSNLDFSLTNSDLH 66
Query: 258 TIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASIAA 437
T+FSTFGKVA+VTVLKDR TR+S+GVAF+ FV+R DAV AV+ MDKKILNGRTL ASIAA
Sbjct: 67 TLFSTFGKVARVTVLKDRTTRKSRGVAFIQFVSRSDAVTAVEQMDKKILNGRTLSASIAA 126
Query: 438 DNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXXXXXX 617
DNGRA EFI+K+VYKDKS+CYECGE+GHLSYECPRN LG RERPV
Sbjct: 127 DNGRAAEFIKKRVYKDKSKCYECGEDGHLSYECPRNRLGIRERPVVKRGRGGGGGGGGGG 186
Query: 618 XXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXXXXXYF 797
WA+ VDG +ERLL YF
Sbjct: 187 GRG---GGDWEEEEEEGEFEEEKWAAAVDG--GVEERLL---KGGEVEKKKVKVKKASYF 238
Query: 798 SDESDEDD 821
SDESDE++
Sbjct: 239 SDESDEEE 246
>gb|EOY18808.1| RNA recognition motif and CCHC-type zinc finger domains containing
protein [Theobroma cacao]
Length = 260
Score = 223 bits (567), Expect = 2e-55
Identities = 129/257 (50%), Positives = 151/257 (58%), Gaps = 9/257 (3%)
Frame = +3
Query: 78 SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX---------LAPSKSTVYVSNVD 230
SD EED+TF++RY LAPSKST+YVSN+D
Sbjct: 11 SDSEEDETFYFRYSSAAAPPSSSSSKPSNPNQTISKCTGGGGGSSGLAPSKSTLYVSNID 70
Query: 231 YNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNG 410
Y+LTNSDLHT+FSTFGK+A+VTVLKD VTR SKGVAF+ FV+RDDA+ A + M K+LNG
Sbjct: 71 YSLTNSDLHTLFSTFGKIARVTVLKDSVTRISKGVAFIQFVSRDDALSAERVMHGKVLNG 130
Query: 411 RTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXX 590
RTL SIA DNGRA EFIRK+VYKDKSRCYECG GHLSYECP+N LGPRERPV+
Sbjct: 131 RTLSTSIAVDNGRAPEFIRKRVYKDKSRCYECGVSGHLSYECPKNQLGPRERPVSKKGRR 190
Query: 591 XXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXX 770
+ NWASVVDG +A+ERL
Sbjct: 191 GCGGGERREDNG---DWSDEELDGGVGFEEENWASVVDG--SAEERL--RKAEMVEEKKK 243
Query: 771 XXXXXXXYFSDESDEDD 821
YFSDESDE++
Sbjct: 244 KVARKASYFSDESDEEE 260
>ref|XP_006436503.1| hypothetical protein CICLE_v10032576mg [Citrus clementina]
gi|568864409|ref|XP_006485591.1| PREDICTED: zinc finger
CCHC-type and RNA-binding motif-containing protein
1-like [Citrus sinensis] gi|557538699|gb|ESR49743.1|
hypothetical protein CICLE_v10032576mg [Citrus
clementina]
Length = 244
Score = 222 bits (565), Expect = 3e-55
Identities = 131/259 (50%), Positives = 154/259 (59%), Gaps = 9/259 (3%)
Frame = +3
Query: 72 NYSD-DEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX--------LAPSKSTVYVSN 224
N SD DEEDDTF+YRY LAPSKSTVYVSN
Sbjct: 7 NKSDSDEEDDTFYYRYASTGNAPANPSSSSSADVTSSGPHKKSKGSGGLAPSKSTVYVSN 66
Query: 225 VDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKIL 404
+DY LTNSDLHT+FSTFGK+A+VTVLKDR TR+S+GVAF+ FV DA+ A + + K+L
Sbjct: 67 LDYALTNSDLHTLFSTFGKIARVTVLKDRATRKSRGVAFIQFVQIPDALSAARAIHGKVL 126
Query: 405 NGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXX 584
NGRT+ ASIAADNGRA+ FI+K+VYKDKSRCYECG+EGHLSYECPRN LGPRERP+
Sbjct: 127 NGRTVNASIAADNGRASSFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPMPKKL 186
Query: 585 XXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXX 764
E++ WASVVDG A+ERLL
Sbjct: 187 RRRSDGEDES-----EFD-------------DGGWASVVDG--GAEERLL-LMGENESEE 225
Query: 765 XXXXXXXXXYFSDESDEDD 821
YFSDESDE++
Sbjct: 226 KRKKAKRVSYFSDESDEEE 244
>gb|EOY18810.1| RNA recognition motif and CCHC-type zinc finger domains containing
protein [Theobroma cacao]
Length = 257
Score = 222 bits (565), Expect = 3e-55
Identities = 129/254 (50%), Positives = 151/254 (59%), Gaps = 6/254 (2%)
Frame = +3
Query: 78 SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSNVDYNL 239
SD EED+TF++RY LAPSKST+YVSN+DY+L
Sbjct: 11 SDSEEDETFYFRYSSVAAPPSSSSSNPNQITSKSTGGGGGSSGLAPSKSTLYVSNLDYSL 70
Query: 240 TNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTL 419
TNSDLHT+FSTFGK+A+V+VLKDRVTR+ KGVAF+ FV+RD A+ A + M K+LNGRTL
Sbjct: 71 TNSDLHTLFSTFGKIARVSVLKDRVTRKPKGVAFIQFVSRDGALSAERVMHGKVLNGRTL 130
Query: 420 RASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXX 599
ASIA DNGRA EFIRK+VYKDKSRCYECG GHLSYECP+N LGPRERPV
Sbjct: 131 SASIAIDNGRAPEFIRKRVYKDKSRCYECGVTGHLSYECPKNQLGPRERPVPKKGRRGCG 190
Query: 600 XXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXX 779
+ NWASVVDG AA+ERL
Sbjct: 191 GGERREDNG---DWADEESDGGDGFEEENWASVVDG--AAEERL--RKAEMVEEKKKKVT 243
Query: 780 XXXXYFSDESDEDD 821
YFSDESDE++
Sbjct: 244 RKVSYFSDESDEEE 257
>ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cucumis sativus]
Length = 261
Score = 218 bits (556), Expect = 3e-54
Identities = 129/263 (49%), Positives = 150/263 (57%), Gaps = 15/263 (5%)
Frame = +3
Query: 78 SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX--------------LAPSKSTVY 215
SD +ED+TF+YRY L PSKST+Y
Sbjct: 13 SDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLY 72
Query: 216 VSNVDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDK 395
VSN DY+LTNSDLHT+FS FGK+A+VTVLKDR TR+S+GVAFV F+++DDAVKA K M
Sbjct: 73 VSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHG 132
Query: 396 KILNGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGE-EGHLSYECPRNFLGPRERPV 572
KILNGR L+A+IA DNGRA EFIRK+VYKDKSRCYECG +GHLSYECP+N LGPRERP
Sbjct: 133 KILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPE 192
Query: 573 AXXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXX 752
+ NWASVVDG+ A +RLL
Sbjct: 193 PKRVRRGGVGARHEEDWGSDVG---------EGFEDDNWASVVDGD--ADQRLL---TGG 238
Query: 753 XXXXXXXXXXXXXYFSDESDEDD 821
YFSDESDEDD
Sbjct: 239 ENIVEKKKEKKASYFSDESDEDD 261
>ref|XP_006407573.1| hypothetical protein EUTSA_v10021363mg [Eutrema salsugineum]
gi|557108719|gb|ESQ49026.1| hypothetical protein
EUTSA_v10021363mg [Eutrema salsugineum]
Length = 257
Score = 218 bits (555), Expect = 4e-54
Identities = 109/169 (64%), Positives = 129/169 (76%), Gaps = 4/169 (2%)
Frame = +3
Query: 75 YSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX----LAPSKSTVYVSNVDYNLT 242
+ D EEDDTF+ RY LAPSKST+YVSN+D++LT
Sbjct: 12 HCDHEEDDTFYDRYVFSVAAPPIPPSNPSSSAKSSAPGGSGGLAPSKSTLYVSNLDFSLT 71
Query: 243 NSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLR 422
NSD+HT+FSTFGKVA+VTVLKDR TR+S+GVAFVL+V+R+DA KA + M+ KILNGR L
Sbjct: 72 NSDIHTLFSTFGKVARVTVLKDRQTRRSRGVAFVLYVSREDAAKAARSMEGKILNGRKLT 131
Query: 423 ASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERP 569
SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECPRN LGPRERP
Sbjct: 132 VSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERP 180
>ref|XP_004308765.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Fragaria vesca subsp. vesca]
Length = 256
Score = 218 bits (555), Expect = 4e-54
Identities = 127/250 (50%), Positives = 145/250 (58%)
Frame = +3
Query: 72 NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLTNSD 251
N DD+E D+ RY LAPSKST+YV+N+DY+LTNSD
Sbjct: 11 NSDDDDELDSLCNRYPSAPQAQKPTKSTGSGSGSGPGSTLAPSKSTLYVANLDYSLTNSD 70
Query: 252 LHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASI 431
LH++FS FGK+A+VTVLKDR TR+SKGVAFV FV RDDAV + + M KILNGR L ASI
Sbjct: 71 LHSLFSRFGKIARVTVLKDRDTRRSKGVAFVQFVTRDDAVASAREMHGKILNGRKLSASI 130
Query: 432 AADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXXXX 611
AADNGRA EFI+K+ YKDKSRCYECG+EGHLSYECP+N LGPRERP
Sbjct: 131 AADNGRAAEFIKKREYKDKSRCYECGDEGHLSYECPKNQLGPRERPPQKKPRRGGGGRGG 190
Query: 612 XXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXXXXX 791
+ NWASVVDG A ERLL
Sbjct: 191 GEARGED---EVEWESGGERFEEDNWASVVDG--GAGERLL-SEEMEEEKKRKKKVKKGG 244
Query: 792 YFSDESDEDD 821
YFSDESD DD
Sbjct: 245 YFSDESDHDD 254
>ref|XP_004149837.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like isoform 1 [Cucumis sativus]
gi|449464242|ref|XP_004149838.1| PREDICTED: zinc finger
CCHC-type and RNA-binding motif-containing protein
1-like isoform 2 [Cucumis sativus]
gi|449464244|ref|XP_004149839.1| PREDICTED: zinc finger
CCHC-type and RNA-binding motif-containing protein
1-like isoform 3 [Cucumis sativus]
Length = 261
Score = 217 bits (553), Expect = 7e-54
Identities = 129/263 (49%), Positives = 149/263 (56%), Gaps = 15/263 (5%)
Frame = +3
Query: 78 SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX--------------LAPSKSTVY 215
SD +ED+TF+YRY L PSKST+Y
Sbjct: 13 SDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLY 72
Query: 216 VSNVDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDK 395
VSN DY+LTNSDLHT+FS FGK+A VTVLKDR TR+S+GVAFV F+++DDAVKA K M
Sbjct: 73 VSNFDYSLTNSDLHTLFSNFGKIAHVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHG 132
Query: 396 KILNGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGE-EGHLSYECPRNFLGPRERPV 572
KILNGR L+A+IA DNGRA EFIRK+VYKDKSRCYECG +GHLSYECP+N LGPRERP
Sbjct: 133 KILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPE 192
Query: 573 AXXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXX 752
+ NWASVVDG+ A +RLL
Sbjct: 193 PKRVRRGGVGARHEEDWGSDVG---------EGFEDDNWASVVDGD--ADQRLL---TGG 238
Query: 753 XXXXXXXXXXXXXYFSDESDEDD 821
YFSDESDEDD
Sbjct: 239 ENIVEKKKEKKASYFSDESDEDD 261
>tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]
Length = 261
Score = 217 bits (553), Expect = 7e-54
Identities = 124/257 (48%), Positives = 144/257 (56%), Gaps = 6/257 (2%)
Frame = +3
Query: 69 GNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLTNS 248
G D EDD+F YRY LAPSKSTVYVSN+D+ LTNS
Sbjct: 7 GGSDSDGEDDSFLYRYPLPSVAASEGGGGKPRGGGGGSGGLAPSKSTVYVSNLDFALTNS 66
Query: 249 DLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRAS 428
DLH +FS FG+VA+VTVLKDR +R+S+GVAFVLFV+R+DA A M K+LNGRTL AS
Sbjct: 67 DLHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAAEMHGKVLNGRTLSAS 126
Query: 429 IAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXXX 608
IAADNGRA EFIR++VY+DKSRCYECGEEGHLSYECPRN LGPRERP
Sbjct: 127 IAADNGRAAEFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPAPSKKSRRGGGGG 186
Query: 609 XXXXXXYE------YNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXX 770
++ WASVVD + ++
Sbjct: 187 GGGRGRGRGGQADWHSDDDEDAAAAVAFEDDKWASVVDTREVEEK---AAGKGEGMGKAA 243
Query: 771 XXXXXXXYFSDESDEDD 821
YFSDESDEDD
Sbjct: 244 RREKRKCYFSDESDEDD 260
>gb|EMJ19402.1| hypothetical protein PRUPE_ppa010566mg [Prunus persica]
Length = 245
Score = 216 bits (551), Expect = 1e-53
Identities = 127/247 (51%), Positives = 146/247 (59%)
Frame = +3
Query: 72 NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLTNSD 251
N SD++ED+TF+YRY LAPSKST+YVSN+DY+LTNSD
Sbjct: 9 NSSDEDEDETFYYRYTSAPETRKPATKQSGSGSGT----LAPSKSTLYVSNLDYSLTNSD 64
Query: 252 LHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASI 431
LHT+FS FGK+A+VTVLK+R TRQS+GVAFV FV+R DAV A M KILNGR L ASI
Sbjct: 65 LHTLFSHFGKIARVTVLKNRETRQSRGVAFVQFVSRTDAVSAAGEMHGKILNGRKLSASI 124
Query: 432 AADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXXXX 611
A+DNGRA EFI+K+ YKDKSRCYECGEEGHLSYECP+N LGPRERP
Sbjct: 125 ASDNGRAAEFIKKREYKDKSRCYECGEEGHLSYECPKNQLGPRERPPPKRVRRGGGGGGG 184
Query: 612 XXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXXXXX 791
E NWASVVD A +RLL
Sbjct: 185 SAAARVE---EAEGDSGGERFEDDNWASVVD--SGADQRLL-VGEEMEEKKRKKGVKKSS 238
Query: 792 YFSDESD 812
YFSDES+
Sbjct: 239 YFSDESE 245
>gb|EXB96201.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Morus notabilis]
Length = 362
Score = 216 bits (550), Expect = 2e-53
Identities = 130/259 (50%), Positives = 148/259 (57%), Gaps = 13/259 (5%)
Frame = +3
Query: 84 DEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSNVDYNLTN 245
D++DDTF+YRY LAPSKST+YVSN+D+ LTN
Sbjct: 108 DDDDDTFYYRYASAAANPPDGAGATTSAAKKHSGGGGGSGTLAPSKSTLYVSNIDFALTN 167
Query: 246 SDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRA 425
SDLHT+FSTFGK+A+V+VLKDR TRQS+GVAFV FV+RDDAV A M K+LNGRTL A
Sbjct: 168 SDLHTLFSTFGKIARVSVLKDRHTRQSRGVAFVQFVSRDDAVFAASQMHGKVLNGRTLTA 227
Query: 426 SIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPV-----AXXXXX 590
SIAADNGR+ EFIRK+VY+DKSRCYECG EGHLSYECP+N LGPRERP
Sbjct: 228 SIAADNGRSAEFIRKRVYRDKSRCYECGAEGHLSYECPKNQLGPRERPPPKRERGRGGGG 287
Query: 591 XXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXX 770
NWASVVDG A +RLL
Sbjct: 288 GGGGGRGTNCWRENEQDEEIGPDGGEGFEEDNWASVVDG--GADDRLL--RSRGDGGQEK 343
Query: 771 XXXXXXXYFSDES--DEDD 821
YFSDES DEDD
Sbjct: 344 KRMKKASYFSDESGDDEDD 362