BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00016249
         (1434 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   790   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   790   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   788   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   786   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         786   0.0  
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...   785   0.0  
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   781   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   773   0.0  
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...   729   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              719   0.0  
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   707   0.0  
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...   706   0.0  
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...   706   0.0  
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...   706   0.0  
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ...   705   0.0  
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   705   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   705   0.0  
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   704   0.0  
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [...   701   0.0  
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...   701   0.0  

>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  790 bits (2041), Expect = 0.0
 Identities = 383/477 (80%), Positives = 420/477 (88%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKYN LRRRQIK+ETEAWEEAAKEYQELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 161  MGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIAAEQ LC EGKNRGAYA + DQLPA+MMAVITMHKLMGLLMTGG  GSARVVQAA HI
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHI 280

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEAKEQERXXXXXXXXXXXXXLHQVQKI 894
            GEAIEHE RIH+FLE  K+ NAL+   E+ P    KE+ER             L QV+KI
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQVRKI 340

Query: 893  VRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSVETV 714
            V+QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ+DD PPDIRPAFVHTLK+VET+
Sbjct: 341  VKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETM 400

Query: 713  RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 534
            +G+RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++GAYLFLPSYIMRTHG
Sbjct: 401  KGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHG 460

Query: 533  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 354
            AKQQREAVKR PK+QLEP+FQAL+TLGNTKW++N+K+LG+VDRIWA+GGRLADLVDR+DV
Sbjct: 461  AKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDV 520

Query: 353  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 174
            PLPEEPD EDE+++           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNL
Sbjct: 521  PLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNL 580

Query: 173  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+YGGGVDKLS
Sbjct: 581  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLS 637


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor
            gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  790 bits (2041), Expect = 0.0
 Identities = 383/477 (80%), Positives = 420/477 (88%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKYN LRRRQIK+ETEAWEEAAKEYQELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 161  MGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIAAEQ LC EGKNRGAYA + DQLPA+MMAVITMHKLMGLLMTGG  GSARVVQAA HI
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHI 280

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEAKEQERXXXXXXXXXXXXXLHQVQKI 894
            GEAIEHE RIH+FLE  K+ NAL+   E+ P    KE+ER             L QV+KI
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKI 340

Query: 893  VRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSVETV 714
            V+QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ+DD PPDIRPAFVHTLK+VET+
Sbjct: 341  VKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETM 400

Query: 713  RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 534
            +G+RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++GAYLFLPSYIMRTHG
Sbjct: 401  KGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHG 460

Query: 533  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 354
            AKQQREAVKR PK+QLEP+FQAL+TLGNTKW++N+K+LG+VDRIWA+GGRLADLVDR+DV
Sbjct: 461  AKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDV 520

Query: 353  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 174
            PLPEEPD EDE+++           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNL
Sbjct: 521  PLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNL 580

Query: 173  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+YGGGVDKLS
Sbjct: 581  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLS 637


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  788 bits (2034), Expect = 0.0
 Identities = 383/477 (80%), Positives = 418/477 (87%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKYN LRRRQIK+ETEAWEEAAKEYQELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 161  MGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIAAEQ LC EGKNRGAYA + DQLPA+MMAVITMHKLMGLLMTGG  GSARVVQAA +I
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYI 280

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEAKEQERXXXXXXXXXXXXXLHQVQKI 894
            GEAIEHE RIH+FLE  K+ NAL+   EE P    KE+ER             L QV+KI
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKI 340

Query: 893  VRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSVETV 714
            V+QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ+DD PPDIRPAFVHTLK+VET+
Sbjct: 341  VKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETM 400

Query: 713  RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 534
            +G+RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++G YLFLPSYIMRTHG
Sbjct: 401  KGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHG 460

Query: 533  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 354
            AKQQREAVKR PK+QLEP+FQAL+TLGNTKW+VN+K+LG+VDRIWA+GGRLADLVDR+DV
Sbjct: 461  AKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDV 520

Query: 353  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 174
            PLPE PDTEDE+E+           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNL
Sbjct: 521  PLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNL 580

Query: 173  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLK+HLAN+YGGGVDKLS
Sbjct: 581  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLS 637


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score =  786 bits (2030), Expect = 0.0
 Identities = 383/477 (80%), Positives = 422/477 (88%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKYN LRRRQIK+ETEAWE+AAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD
Sbjct: 153  MGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 212

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIAAEQ LC EGKNRGAYA + DQLPA+MMAVITMHKLMGLLMTGG +GSARVVQAA HI
Sbjct: 213  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHI 272

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEAKEQERXXXXXXXXXXXXXLHQVQKI 894
            GEAIEHE RIH+FLE  K KNAL+ + EE      KE+ER             L QV+KI
Sbjct: 273  GEAIEHEARIHRFLEKTK-KNALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKI 331

Query: 893  VRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSVETV 714
            V+QQDD KPWGQD  VKVGC+LIQIL +TAYIQPP DQ+DD PPDIRPAF+HTLK+VETV
Sbjct: 332  VKQQDDEKPWGQDNLVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTVETV 391

Query: 713  RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 534
            +G+RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP +W+GY+RGAYLFLPSYIMRTHG
Sbjct: 392  KGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHG 451

Query: 533  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 354
            AKQQREAVKR PK+QLEP+FQAL+TLGNTKW+VNK++LG++DRIWA+GGRLADLVDR+DV
Sbjct: 452  AKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDV 511

Query: 353  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 174
            PLPEEPDTEDE E+           KEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNL
Sbjct: 512  PLPEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNL 571

Query: 173  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            DFRGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGKSGL WLK+HLAN+YGGGVDKLS
Sbjct: 572  DFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLS 628


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  786 bits (2029), Expect = 0.0
 Identities = 382/477 (80%), Positives = 418/477 (87%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKYN LRRRQIK+ETEAWEEAAKEYQELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 161  MGVGKYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIAAEQ LC EGKNRGAYA + DQLPA+MMAVITMHKLMGLLMTGG  GSARVVQAA +I
Sbjct: 221  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYI 280

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEAKEQERXXXXXXXXXXXXXLHQVQKI 894
            GEAIEHE RIH+FLE  K+ NAL+   EE P    KE+ER             L QV+KI
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKI 340

Query: 893  VRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSVETV 714
            V+QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ+DD PPDIRPAFVHTLK+VET+
Sbjct: 341  VKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETM 400

Query: 713  RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 534
            +G+RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++G YLFLPSYIMRTHG
Sbjct: 401  KGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHG 460

Query: 533  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 354
            AKQQREAVKR PK+QLEP+FQAL+TLGNTKW+VN+K+LG+V+RIWA+GGRLADLVDR+DV
Sbjct: 461  AKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDV 520

Query: 353  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 174
            PLPE PDTEDE+E+           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNL
Sbjct: 521  PLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNL 580

Query: 173  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLK+HLAN+YGGGVDKLS
Sbjct: 581  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLS 637


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score =  785 bits (2026), Expect = 0.0
 Identities = 381/477 (79%), Positives = 418/477 (87%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKYN LRRRQIK+ETEAWEEAAKEYQELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 161  MGVGKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 220

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIAAEQ LC EGKNRGA A + DQLPA+MMAVITMHKLMG LMTGG  GSARVVQAA HI
Sbjct: 221  AIAAEQKLCDEGKNRGACAPFFDQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAASHI 280

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEAKEQERXXXXXXXXXXXXXLHQVQKI 894
            GEAIEHE RIH+FLE  K+ NAL+   E+ P    KE+ER             L QV+KI
Sbjct: 281  GEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKI 340

Query: 893  VRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSVETV 714
            V+QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ+DD PPDIRPAFVHTLK+VET+
Sbjct: 341  VKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETM 400

Query: 713  RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 534
            +G+RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++GAYLFLPSYIMRTHG
Sbjct: 401  KGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHG 460

Query: 533  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 354
            AKQQREAVKR PK+QLEP+FQAL+TLGNTKW++N+K+LG+VDRIWA+GGRLADLVDR+DV
Sbjct: 461  AKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDV 520

Query: 353  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 174
            PLPEEPD EDE+++           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNL
Sbjct: 521  PLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNL 580

Query: 173  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+YGGGVDKLS
Sbjct: 581  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLS 637


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            lycopersicum]
          Length = 993

 Score =  781 bits (2018), Expect = 0.0
 Identities = 380/477 (79%), Positives = 422/477 (88%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKYN LRRRQIK+ETEAWE+AAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPL+D
Sbjct: 153  MGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKD 212

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIAAEQ LC EGKNRGAYA + DQLPA+MMAVITMHKLMGLLMTGG +GSARVVQAA HI
Sbjct: 213  AIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHI 272

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEAKEQERXXXXXXXXXXXXXLHQVQKI 894
            GEAIEHE RIH+FLE  K KNAL+ + EE      KE+ER             L QV+KI
Sbjct: 273  GEAIEHEARIHRFLEKTK-KNALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKI 331

Query: 893  VRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSVETV 714
            V+QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ++D PPDIRPAF+HTLK+V+TV
Sbjct: 332  VKQQDDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTVDTV 391

Query: 713  RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 534
            +G+RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP +W+GY+RGAYLFLPSYIMRTHG
Sbjct: 392  KGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHG 451

Query: 533  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 354
            AKQQREAVKR PK+QLEP+FQAL+TLGNTKW+VNK++LG++DRIWA+GGRLADLVDR+DV
Sbjct: 452  AKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDV 511

Query: 353  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 174
            PLPEEPDTE+E E+           KEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNL
Sbjct: 512  PLPEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNL 571

Query: 173  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            DFRGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGKSGL WLK+HLAN+YGGGVDKLS
Sbjct: 572  DFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLS 628


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  773 bits (1996), Expect = 0.0
 Identities = 373/476 (78%), Positives = 416/476 (87%), Gaps = 2/476 (0%)
 Frame = -2

Query: 1424 GKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIA 1245
            GK+N LRRRQIKMETEAWEEAAKEY+ELL DMCEQKLAPNLPYIKSLFLGWFEPLRD IA
Sbjct: 138  GKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIA 197

Query: 1244 AEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHIGEA 1065
            AEQDLCK+GKNR AYA Y D LPADMMAVITMHKLMGLLMTG  NGSARVVQAACHIGEA
Sbjct: 198  AEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEA 257

Query: 1064 IEHEVRIHKFLENCKRKNALNRTCEEGPDPEAKEQERXXXXXXXXXXXXXLHQVQKIVRQ 885
            IEHEVRI +F+E  K+K+A +   + G +P  KEQE+             L QV++IV++
Sbjct: 258  IEHEVRIQRFMEKTKKKSASSNNPDGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKR 317

Query: 884  QDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSV--ETVR 711
            QDD KPWGQDA VKVG RLI++L +TAYIQPP DQ+ D PPDIRPAFVHTLK+V  ET +
Sbjct: 318  QDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQK 377

Query: 710  GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGA 531
            GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPL+WTGY++GAYLFLPSY+MR HGA
Sbjct: 378  GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGA 437

Query: 530  KQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVP 351
            +QQREA+KR+P++ LEP F+ALNTLGNTKW++NK++LGV+DRIWA+GGRLADLVDR+DVP
Sbjct: 438  RQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVP 497

Query: 350  LPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 171
            LPEEPDTEDE+E+           KENSERHSQRCDIELKLAVARKMKDEDGF+YPHNLD
Sbjct: 498  LPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLD 557

Query: 170  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+Y GGVDKLS
Sbjct: 558  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLS 613


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  729 bits (1883), Expect = 0.0
 Identities = 356/495 (71%), Positives = 412/495 (83%), Gaps = 18/495 (3%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKYN LR+RQIK+ETEAW+EAAKEYQELL DMCEQKLAPNLPYIKSLFLGWFEPLRD
Sbjct: 147  MGVGKYNLLRKRQIKLETEAWQEAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRD 206

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTG-GCNGSARVVQAACH 1077
            AIAA+QD CK+  +R ++A Y D LPAD MAVITMHKLMGLLMT  G  GS RVVQAAC 
Sbjct: 207  AIAADQDSCKQPNSRQSHAPYFDHLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACA 266

Query: 1076 IGEAIEHEVRIHKFLENCKRK-NALNRTCEEGPDPEA--------------KEQERXXXX 942
            IGEAIEHEVRIH+FLE  K+K N +++  E    P                KEQER    
Sbjct: 267  IGEAIEHEVRIHRFLEKTKKKKNTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRKK 326

Query: 941  XXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPP 762
                     + QV+ IV++Q+D+KPWGQ+A VKVGCRLIQ+L  TAYIQPP+DQ+ D PP
Sbjct: 327  VNKLIKRQKMQQVRGIVKEQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPP 386

Query: 761  DIRPAFVHTLKSV--ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTG 588
            DIRPAFVH LK++  +T + +RRYGVIECDP+VRKG+EKTARHMV+PYMPMLVPP++WTG
Sbjct: 387  DIRPAFVHNLKTITRDTQKTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTG 446

Query: 587  YERGAYLFLPSYIMRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVD 408
            Y+RGAYLFLPSY+MRTHGAKQQRE VKR+P++QLEP+F+AL+TLG+TKW+VNK++LGV+D
Sbjct: 447  YDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVID 506

Query: 407  RIWANGGRLADLVDRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKL 228
            RIWA+GGRLADLVDR+DVPLPEEPDTEDE+E+           KENSERHSQRCDIELKL
Sbjct: 507  RIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKL 566

Query: 227  AVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLK 48
            A +RKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEF+EGR LGKSGL WLK
Sbjct: 567  AASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLK 626

Query: 47   VHLANLYGGGVDKLS 3
            +HLANLY GGVDKLS
Sbjct: 627  IHLANLYAGGVDKLS 641


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  719 bits (1857), Expect = 0.0
 Identities = 346/445 (77%), Positives = 387/445 (86%), Gaps = 2/445 (0%)
 Frame = -2

Query: 1331 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYALYIDQLPADMMAVIT 1152
            MCEQKLAPNLPYIKSLFLGWFEPLRD IAAEQDLCK+GKNR AYA Y D LPADMMAVIT
Sbjct: 1    MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60

Query: 1151 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 972
            MHKLMGLLMTG  NGSARVVQAACHIGEAIEHEVRI +F+E  K+K+A +   + G +P 
Sbjct: 61   MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPV 120

Query: 971  AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQP 792
             KEQE+             L QV++IV++QDD KPWGQDA VKVG RLI++L +TAYIQP
Sbjct: 121  TKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQP 180

Query: 791  PIDQMDDAPPDIRPAFVHTLKSV--ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMP 618
            P DQ+ D PPDIRPAFVHTLK+V  ET +GTRRYGVIECDPLVRKGLEKTARHMVIPYMP
Sbjct: 181  PADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMP 240

Query: 617  MLVPPLSWTGYERGAYLFLPSYIMRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWK 438
            MLVPPL+WTGY++GAYLFLPSY+MR HGA+QQREA+KR+P++ LEP F+ALNTLGNTKW+
Sbjct: 241  MLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWR 300

Query: 437  VNKKILGVVDRIWANGGRLADLVDRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERH 258
            +NK++LGV+DRIWA+GGRLADLVDR+DVPLPEEPDTEDE+E+           KENSERH
Sbjct: 301  INKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERH 360

Query: 257  SQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 78
            SQRCDIELKLAVARKMKDEDGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP
Sbjct: 361  SQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 420

Query: 77   LGKSGLCWLKVHLANLYGGGVDKLS 3
            LGKSGL WLK+HLAN+Y GGVDKLS
Sbjct: 421  LGKSGLRWLKIHLANVYAGGVDKLS 445


>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
            DNA-directed RNA polymerase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 997

 Score =  707 bits (1824), Expect = 0.0
 Identities = 351/489 (71%), Positives = 402/489 (82%), Gaps = 12/489 (2%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKY  L++RQIKMETEAWEEAA+EYQELL DMCEQKLAPNLPYIKSLFLGWFEPLRD
Sbjct: 144  MGIGKYTILKKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRD 203

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMT-GGCNGSARVVQAACH 1077
            AIA EQ+L +E  N+ ++  Y D LPADMMAVITMHKLMGLLMT  G NGS RVVQAAC 
Sbjct: 204  AIAKEQELSREKNNKLSHGPYFDALPADMMAVITMHKLMGLLMTTNGGNGSVRVVQAACA 263

Query: 1076 IGEAIEHEVRIHKFLENCKRKNALNRTCE-EGP------DPE--AKEQERXXXXXXXXXX 924
            +GEAIEHE RIH+FLE  K+K    +  E EG       D E  AKEQE+          
Sbjct: 264  VGEAIEHEARIHRFLEKTKKKKKSTKNEEPEGKLEPVTSDAEKLAKEQEKLRKKVTELMK 323

Query: 923  XXXLHQVQKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAF 744
               + QV+ + +  DD  PWGQ+AQVKVGCRLIQ+L +TAYIQPP++Q+ D  PDIRPAF
Sbjct: 324  KQKVQQVRGLTKGHDDSMPWGQEAQVKVGCRLIQLLIETAYIQPPVNQLGDGLPDIRPAF 383

Query: 743  VHTLKSV--ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAY 570
            +HTLK+V  +T + +RRYGVIECDP+VR GLEK+ARHMVIPYMPMLVPPL+W GY++GAY
Sbjct: 384  MHTLKNVMKDTQKTSRRYGVIECDPIVRNGLEKSARHMVIPYMPMLVPPLNWEGYDQGAY 443

Query: 569  LFLPSYIMRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANG 390
            LFLPSY+MRTHGAKQQR AVKR+P +QLEP+++ALNTLGNTKW++NKKIL VVDRIWANG
Sbjct: 444  LFLPSYVMRTHGAKQQRNAVKRTPWKQLEPVYEALNTLGNTKWRINKKILTVVDRIWANG 503

Query: 389  GRLADLVDRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKM 210
            GRLA L+DR+D PLPEE +TEDE+E+           KENSERHSQRCDIELKLAVARKM
Sbjct: 504  GRLAGLIDREDEPLPEELETEDENEIKKWKWKVKNVKKENSERHSQRCDIELKLAVARKM 563

Query: 209  KDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANL 30
            KDEDGFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEGRPLGKSG  WLK+HLAN+
Sbjct: 564  KDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGKSGFRWLKIHLANV 623

Query: 29   YGGGVDKLS 3
            Y GGVDKLS
Sbjct: 624  YAGGVDKLS 632


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533046|gb|ESR44229.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score =  706 bits (1821), Expect = 0.0
 Identities = 345/482 (71%), Positives = 402/482 (83%), Gaps = 5/482 (1%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG GKY  L+ RQ+K+ETEAWE+AA EY+ELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 184  MGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 243

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIA EQ+ C+  K++ AYA Y DQLPADMMAVITMHKLMGLLMTGG +G ARVVQAAC I
Sbjct: 244  AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 303

Query: 1073 GEAIEHEVRIHKFLENCKRKNAL-NRTCEEGPDPEA--KEQERXXXXXXXXXXXXXLHQV 903
            G+AIE EVRIHKFLE  K+KN   N+  EEG +      EQE+             L  V
Sbjct: 304  GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 363

Query: 902  QKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSV 723
            ++IV+ QDD KPWGQDA+ KVG R+I++LTQTAYIQ P DQ+ DAPPDI PAF HTL++V
Sbjct: 364  RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTV 423

Query: 722  --ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYI 549
              ET  G+++YGVIEC+PLV KGLE+TARHMVIPYMPMLVPP+ WTGY++GA+ FLPSY+
Sbjct: 424  SKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYV 483

Query: 548  MRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLV 369
            MRTHGAKQQR+ VKR+PK+QLEP+F+AL+TLGNTKW+VN ++L V+DRIW+ GGRLADLV
Sbjct: 484  MRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLV 543

Query: 368  DRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFY 189
            DR+DVPLPE+P+TEDE+++           KEN ERHSQRCDIELKL+VARKMKDE+GFY
Sbjct: 544  DRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFY 603

Query: 188  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDK 9
            YPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGL WLK+HLANLY GGVDK
Sbjct: 604  YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDK 663

Query: 8    LS 3
            LS
Sbjct: 664  LS 665


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533045|gb|ESR44228.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score =  706 bits (1821), Expect = 0.0
 Identities = 345/482 (71%), Positives = 402/482 (83%), Gaps = 5/482 (1%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG GKY  L+ RQ+K+ETEAWE+AA EY+ELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 184  MGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 243

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIA EQ+ C+  K++ AYA Y DQLPADMMAVITMHKLMGLLMTGG +G ARVVQAAC I
Sbjct: 244  AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 303

Query: 1073 GEAIEHEVRIHKFLENCKRKNAL-NRTCEEGPDPEA--KEQERXXXXXXXXXXXXXLHQV 903
            G+AIE EVRIHKFLE  K+KN   N+  EEG +      EQE+             L  V
Sbjct: 304  GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 363

Query: 902  QKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSV 723
            ++IV+ QDD KPWGQDA+ KVG R+I++LTQTAYIQ P DQ+ DAPPDI PAF HTL++V
Sbjct: 364  RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTV 423

Query: 722  --ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYI 549
              ET  G+++YGVIEC+PLV KGLE+TARHMVIPYMPMLVPP+ WTGY++GA+ FLPSY+
Sbjct: 424  SKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYV 483

Query: 548  MRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLV 369
            MRTHGAKQQR+ VKR+PK+QLEP+F+AL+TLGNTKW+VN ++L V+DRIW+ GGRLADLV
Sbjct: 484  MRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLV 543

Query: 368  DRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFY 189
            DR+DVPLPE+P+TEDE+++           KEN ERHSQRCDIELKL+VARKMKDE+GFY
Sbjct: 544  DRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFY 603

Query: 188  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDK 9
            YPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGL WLK+HLANLY GGVDK
Sbjct: 604  YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDK 663

Query: 8    LS 3
            LS
Sbjct: 664  LS 665


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533044|gb|ESR44227.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score =  706 bits (1821), Expect = 0.0
 Identities = 345/482 (71%), Positives = 402/482 (83%), Gaps = 5/482 (1%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG GKY  L+ RQ+K+ETEAWE+AA EY+ELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 184  MGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 243

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIA EQ+ C+  K++ AYA Y DQLPADMMAVITMHKLMGLLMTGG +G ARVVQAAC I
Sbjct: 244  AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 303

Query: 1073 GEAIEHEVRIHKFLENCKRKNAL-NRTCEEGPDPEA--KEQERXXXXXXXXXXXXXLHQV 903
            G+AIE EVRIHKFLE  K+KN   N+  EEG +      EQE+             L  V
Sbjct: 304  GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 363

Query: 902  QKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSV 723
            ++IV+ QDD KPWGQDA+ KVG R+I++LTQTAYIQ P DQ+ DAPPDI PAF HTL++V
Sbjct: 364  RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTV 423

Query: 722  --ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYI 549
              ET  G+++YGVIEC+PLV KGLE+TARHMVIPYMPMLVPP+ WTGY++GA+ FLPSY+
Sbjct: 424  SKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYV 483

Query: 548  MRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLV 369
            MRTHGAKQQR+ VKR+PK+QLEP+F+AL+TLGNTKW+VN ++L V+DRIW+ GGRLADLV
Sbjct: 484  MRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLV 543

Query: 368  DRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFY 189
            DR+DVPLPE+P+TEDE+++           KEN ERHSQRCDIELKL+VARKMKDE+GFY
Sbjct: 544  DRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFY 603

Query: 188  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDK 9
            YPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGL WLK+HLANLY GGVDK
Sbjct: 604  YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDK 663

Query: 8    LS 3
            LS
Sbjct: 664  LS 665


>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
          Length = 932

 Score =  705 bits (1819), Expect = 0.0
 Identities = 345/491 (70%), Positives = 403/491 (82%), Gaps = 14/491 (2%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+ KYN+L++RQIK+ETEAWEEAAKEYQELLMDMCE KLAPNLPYIKSLFLGWFEPLRD
Sbjct: 146  MGVAKYNTLKKRQIKIETEAWEEAAKEYQELLMDMCEHKLAPNLPYIKSLFLGWFEPLRD 205

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCN-GSARVVQAACH 1077
            +I  EQ+LCKE   R ++A Y ++L ADMMAV+TMHKLMGLLMT     G  RVVQAAC 
Sbjct: 206  SIVGEQELCKENC-RISHAAYFNELSADMMAVVTMHKLMGLLMTNTAGTGGIRVVQAACQ 264

Query: 1076 IGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEA-----------KEQERXXXXXXXX 930
            IGEAIEHE +I  FL   K+K    +T ++ PD E+           K+QE+        
Sbjct: 265  IGEAIEHEAKIQSFLGKTKKK----KTTDKKPDGESEPVTNKQEKLVKDQEKLRKKVTQL 320

Query: 929  XXXXXLHQVQKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRP 750
                 +HQV+KIV+  D  K WGQ+A VKVGCRLIQ+L + AYIQPP+DQ+ D PPDIRP
Sbjct: 321  LKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPPDIRP 380

Query: 749  AFVHTLKSV--ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERG 576
            AFVH+LK++  +  +G+RRYGVIECD LVRKGLEKTARHMVIPYMPMLVPP +WTGY+RG
Sbjct: 381  AFVHSLKTITKDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRG 440

Query: 575  AYLFLPSYIMRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWA 396
            AYLFLPSY+MRTHGAKQQRE VKR+P++QLEPIF+AL+TLGNTKW++NK++LGVVDR+WA
Sbjct: 441  AYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWA 500

Query: 395  NGGRLADLVDRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVAR 216
            NGGR+A LVDR+DVPLPE+PDTEDE+E+           K+N+ERHS RCD+ELKLAVAR
Sbjct: 501  NGGRVASLVDREDVPLPEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVAR 560

Query: 215  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLA 36
            KM+DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLK+HLA
Sbjct: 561  KMRDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLA 620

Query: 35   NLYGGGVDKLS 3
            NLY GGVDKLS
Sbjct: 621  NLYAGGVDKLS 631


>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 996

 Score =  705 bits (1819), Expect = 0.0
 Identities = 345/491 (70%), Positives = 403/491 (82%), Gaps = 14/491 (2%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+ KYN+L++RQIK+ETEAWEEAAKEYQELLMDMCE KLAPNLPYIKSLFLGWFEPLRD
Sbjct: 146  MGVAKYNTLKKRQIKIETEAWEEAAKEYQELLMDMCEHKLAPNLPYIKSLFLGWFEPLRD 205

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCN-GSARVVQAACH 1077
            +I  EQ+LCKE   R ++A Y ++L ADMMAV+TMHKLMGLLMT     G  RVVQAAC 
Sbjct: 206  SIVGEQELCKENC-RISHAAYFNELSADMMAVVTMHKLMGLLMTNTAGTGGIRVVQAACQ 264

Query: 1076 IGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEA-----------KEQERXXXXXXXX 930
            IGEAIEHE +I  FL   K+K    +T ++ PD E+           K+QE+        
Sbjct: 265  IGEAIEHEAKIQSFLGKTKKK----KTTDKKPDGESEPVTNKQEKLVKDQEKLRKKVTQL 320

Query: 929  XXXXXLHQVQKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRP 750
                 +HQV+KIV+  D  K WGQ+A VKVGCRLIQ+L + AYIQPP+DQ+ D PPDIRP
Sbjct: 321  LKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPPDIRP 380

Query: 749  AFVHTLKSV--ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERG 576
            AFVH+LK++  +  +G+RRYGVIECD LVRKGLEKTARHMVIPYMPMLVPP +WTGY+RG
Sbjct: 381  AFVHSLKTITKDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRG 440

Query: 575  AYLFLPSYIMRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWA 396
            AYLFLPSY+MRTHGAKQQRE VKR+P++QLEPIF+AL+TLGNTKW++NK++LGVVDR+WA
Sbjct: 441  AYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWA 500

Query: 395  NGGRLADLVDRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVAR 216
            NGGR+A LVDR+DVPLPE+PDTEDE+E+           K+N+ERHS RCD+ELKLAVAR
Sbjct: 501  NGGRVASLVDREDVPLPEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVAR 560

Query: 215  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLA 36
            KM+DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLK+HLA
Sbjct: 561  KMRDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLA 620

Query: 35   NLYGGGVDKLS 3
            NLY GGVDKLS
Sbjct: 621  NLYAGGVDKLS 631


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  705 bits (1819), Expect = 0.0
 Identities = 347/482 (71%), Positives = 397/482 (82%), Gaps = 5/482 (1%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            M  G+Y  LRRRQ+K+ETEAWE AAKEY+ELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 189  MEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 248

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AI  EQ+LC+ GKN+ AYA Y DQLPADMM+VITMHKL+GLLMTGG +GS RVVQAAC I
Sbjct: 249  AIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVI 308

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGP--DPEAKEQERXXXXXXXXXXXXXLHQVQ 900
            G+AIE EVRIH FLE  KRK        EG   DP   EQE+             LH  +
Sbjct: 309  GDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAAR 368

Query: 899  KIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPID-QMDDAPPDIRPAFVHTLKSV 723
            +IV+  D+ KPWG +A+ KVG RLI++L QTAYIQPP+D Q+ D PPDIRPAFVHT K+V
Sbjct: 369  QIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTV 428

Query: 722  --ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYI 549
              E  +  RR+GVIECDPLV+KGLE+TARHMVIPY+PMLVPPL WTGY++GA+LFLPSY+
Sbjct: 429  MREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYV 488

Query: 548  MRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLV 369
            MRTHGA+QQREAVKR+P+ QLEP+F+ALNTLGNTKW++NK++  VVDRIWA GG LADLV
Sbjct: 489  MRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLV 548

Query: 368  DRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFY 189
            DR+DVPLPE+PDTEDE+++           K NSERHSQRCDIELKLAVARKMKDEDGF+
Sbjct: 549  DRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFF 608

Query: 188  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDK 9
            YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLK+HLANL+ GGVDK
Sbjct: 609  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDK 668

Query: 8    LS 3
            LS
Sbjct: 669  LS 670


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score =  704 bits (1816), Expect = 0.0
 Identities = 344/482 (71%), Positives = 401/482 (83%), Gaps = 5/482 (1%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG GKY  L+ RQ+K+ETEAWE+AA EY+ELLMDMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 180  MGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 239

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AIA EQ+ C+  K++ AYA Y DQLPADMMAVITMHKLMGLLMTGG +G ARVVQAAC I
Sbjct: 240  AIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACII 299

Query: 1073 GEAIEHEVRIHKFLENCKRKNAL-NRTCEEGPDPEA--KEQERXXXXXXXXXXXXXLHQV 903
            G+AIE EVRIHKFLE  K+KN   N+  EEG +      EQE+             L  V
Sbjct: 300  GDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAV 359

Query: 902  QKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSV 723
            ++IV+ QDD KPWGQDA+ KVG R+I++LTQTAYIQ P DQ+ DAPPDI PAF H L++V
Sbjct: 360  RRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAFTHALRTV 419

Query: 722  --ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYI 549
              ET  G+++YGVIEC+PLV KGLE+TARHMVIPYMPMLVPP+ WTGY++GA+ FLPSY+
Sbjct: 420  SKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYV 479

Query: 548  MRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLV 369
            MRTHGAKQQR+ VKR+PK+QLEP+F+AL+TLGNTKW+VN ++L V+DRIW+ GGRLADLV
Sbjct: 480  MRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLV 539

Query: 368  DRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFY 189
            DR+DVPLPE+P+TEDE+++           KEN ERHSQRCDIELKL+VARKMKDE+GFY
Sbjct: 540  DRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFY 599

Query: 188  YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDK 9
            YPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGL WLK+HLANLY GGVDK
Sbjct: 600  YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDK 659

Query: 8    LS 3
            LS
Sbjct: 660  LS 661


>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 862

 Score =  701 bits (1810), Expect = 0.0
 Identities = 343/488 (70%), Positives = 398/488 (81%), Gaps = 11/488 (2%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG+GKY  L+RRQ+KMETEAWE+ A+EYQE+L DMCEQKLAPNLPY+KSLFLGWFEPLRD
Sbjct: 11   MGIGKYTILKRRQVKMETEAWEQTAREYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRD 70

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTG-GCNGSARVVQAACH 1077
            AI AEQ+LCK   +R  +  Y + LPADMMAVITMHKLMGLLMTG G   S RVVQAA  
Sbjct: 71   AILAEQELCKVN-SRVPHRAYFNDLPADMMAVITMHKLMGLLMTGNGGTASIRVVQAASV 129

Query: 1076 IGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPEA--------KEQERXXXXXXXXXXX 921
            +GEAIE+E +IHKFLE  K++  L     EG    A        KEQE+           
Sbjct: 130  VGEAIENEAKIHKFLEKTKKRKNLKEKISEGESVAAIYEGEKLTKEQEKLRKKVTTLMKK 189

Query: 920  XXLHQVQKIVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFV 741
              +HQV++IV+  DD  PWGQ+A +KVG RLIQ++ +TAYIQPPIDQ+ D PPDIRPAFV
Sbjct: 190  QKVHQVRRIVKGHDDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFV 249

Query: 740  HTLKSV--ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYL 567
            HTLK++  +T + +RRYGVIECDPLVRKGLEK+ARHMVIPYMPMLVPPL+WTGY++GAY 
Sbjct: 250  HTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAYF 309

Query: 566  FLPSYIMRTHGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGG 387
            FLPSY+MR HGAKQQR A+KR+ + QLEP+F+AL+TLGNTKW+VNK+ILGV+DRIWA+GG
Sbjct: 310  FLPSYVMRIHGAKQQRVAIKRASRNQLEPVFKALDTLGNTKWRVNKRILGVIDRIWASGG 369

Query: 386  RLADLVDRDDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMK 207
             LA LVDR+DVPLPEEP TEDE+E+           KENSERHSQRCD+ELKLAVARKMK
Sbjct: 370  HLAGLVDREDVPLPEEPQTEDEAEIRKWRWKVKSVKKENSERHSQRCDVELKLAVARKMK 429

Query: 206  DEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLY 27
            DE+GFYYPHN+DFRGRAYPMHPYLNHLGSD+CRGILEFAEGRPLGKSGL WLK+HLANLY
Sbjct: 430  DEEGFYYPHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLY 489

Query: 26   GGGVDKLS 3
             GGVDKLS
Sbjct: 490  AGGVDKLS 497


>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  701 bits (1808), Expect = 0.0
 Identities = 343/480 (71%), Positives = 396/480 (82%), Gaps = 3/480 (0%)
 Frame = -2

Query: 1433 MGLGKYNSLRRRQIKMETEAWEEAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRD 1254
            MG GKY+ L+RRQIK+ETEAWE AAKEY+EL+MDMCEQKLAPNLPY+KSLFLGWFEPLR+
Sbjct: 181  MGQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRN 240

Query: 1253 AIAAEQDLCKEGKNRGAYALYIDQLPADMMAVITMHKLMGLLMTGGCNGSARVVQAACHI 1074
            AI  EQDLC++GKN+ AYA YIDQLPADMM+VITMHKLMGLLMTGG +G+ RVV AAC I
Sbjct: 241  AIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTI 300

Query: 1073 GEAIEHEVRIHKFLENCKRKNALNRTCEEGP-DPEAKEQERXXXXXXXXXXXXXLHQVQK 897
            GEAIE EVRIHKFLE   RK  +++  E G  D   KE+E+             L  V+ 
Sbjct: 301  GEAIEQEVRIHKFLE-MTRKKKVDKDQENGESDAAKKEREKLNKKVTNLMKKQKLKAVRG 359

Query: 896  IVRQQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMDDAPPDIRPAFVHTLKSV-- 723
            IV + D  K W  +A+ KVG RLI++LTQTA+IQPP DQ+ D PPDIRPAFVHT ++V  
Sbjct: 360  IVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAK 419

Query: 722  ETVRGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMR 543
            +    +RRYGVIECDPLV KGLEKTARHMVIPYMPMLVPPL+WTGY++G Y FLPSY+MR
Sbjct: 420  DAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMR 479

Query: 542  THGAKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDR 363
             HGA+QQREA+KR+P++QLEP+F+AL+ LGNT+W+VNK++L VVDRIWA+GG LADLVDR
Sbjct: 480  IHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDR 539

Query: 362  DDVPLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYP 183
            +DVPLPEEPDTEDE+ +           KEN ERHSQRCD ELKLAVARKMKDE+GFYYP
Sbjct: 540  NDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYP 599

Query: 182  HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLS 3
            HNLDFRGRAYPMHPYLNHLGSD+CRGILEF EGRPLGKSGL WLK+HLANLY GGVDKLS
Sbjct: 600  HNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLS 659