BLASTX nr result

ID: Rehmannia24_contig00016169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00016169
         (304 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347780.1| PREDICTED: ribosome biogenesis protein BMS1 ...    61   1e-07
ref|XP_006347779.1| PREDICTED: ribosome biogenesis protein BMS1 ...    61   1e-07
ref|XP_006347778.1| PREDICTED: ribosome biogenesis protein BMS1 ...    61   1e-07
ref|XP_004230113.1| PREDICTED: ribosome biogenesis protein BMS1 ...    57   2e-06

>ref|XP_006347780.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X3
           [Solanum tuberosum]
          Length = 1010

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/55 (47%), Positives = 39/55 (70%)
 Frame = +1

Query: 133 KTSSETIGDSSDEEALYSSEQRPPTQNNFKEQLDFHEGRVRRKAVFENEMDIDNQ 297
           K S +T  DSS+EE    SE+ P   ++F+E +DFH+GR+RRKA+F+N+ D D +
Sbjct: 257 KESKDTSDDSSEEEDTIGSEKHPGLSSSFREHVDFHDGRMRRKAIFDNDNDFDEK 311


>ref|XP_006347779.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X2
           [Solanum tuberosum]
          Length = 1216

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/55 (47%), Positives = 39/55 (70%)
 Frame = +1

Query: 133 KTSSETIGDSSDEEALYSSEQRPPTQNNFKEQLDFHEGRVRRKAVFENEMDIDNQ 297
           K S +T  DSS+EE    SE+ P   ++F+E +DFH+GR+RRKA+F+N+ D D +
Sbjct: 464 KESKDTSDDSSEEEDTIGSEKHPGLSSSFREHVDFHDGRMRRKAIFDNDNDFDEK 518


>ref|XP_006347778.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X1
           [Solanum tuberosum]
          Length = 1217

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/55 (47%), Positives = 39/55 (70%)
 Frame = +1

Query: 133 KTSSETIGDSSDEEALYSSEQRPPTQNNFKEQLDFHEGRVRRKAVFENEMDIDNQ 297
           K S +T  DSS+EE    SE+ P   ++F+E +DFH+GR+RRKA+F+N+ D D +
Sbjct: 464 KESKDTSDDSSEEEDTIGSEKHPGLSSSFREHVDFHDGRMRRKAIFDNDNDFDEK 518


>ref|XP_004230113.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Solanum
           lycopersicum]
          Length = 1212

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/55 (43%), Positives = 39/55 (70%)
 Frame = +1

Query: 133 KTSSETIGDSSDEEALYSSEQRPPTQNNFKEQLDFHEGRVRRKAVFENEMDIDNQ 297
           K S+++  DSS+EE     E+ P   ++F+E +DFH+GR+RRKA+F+N+ D D +
Sbjct: 463 KESNDSSDDSSEEEDNIGPEKHPGLSSSFREHVDFHDGRMRRKAIFDNDNDFDEK 517


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