BLASTX nr result
ID: Rehmannia24_contig00016140
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia24_contig00016140 (572 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004239670.1| PREDICTED: double-stranded RNA-binding prote... 63 6e-08 ref|XP_006345796.1| PREDICTED: double-stranded RNA-binding prote... 62 1e-07 >ref|XP_004239670.1| PREDICTED: double-stranded RNA-binding protein 2-like [Solanum lycopersicum] Length = 553 Score = 62.8 bits (151), Expect = 6e-08 Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 13/149 (8%) Frame = -1 Query: 572 PPIP-STQSTLLTRPPAFGTAPPVCVRQAVPVHAA--VKVEK-------ARFSGPPTSRA 423 PP+P S+Q + RPP G APPVC+RQAVPV+AA V+ E+ R SG + Sbjct: 322 PPLPQSSQPPRVMRPPGLGVAPPVCIRQAVPVYAAPPVRAEELSTLDRVMRHSGLGMAPV 381 Query: 422 EEVQVSRAAPGRLDESPFSKPPLIGVEESLSSMSPPITIAPNAEAPSVQLEIPSSTEVGP 243 V AP +DE SK P E + + + AE+P E S +EV P Sbjct: 382 YAVPSVPKAPLLVDEPLASKAP----EMQVLDLPTCKAVLGKAESPHDHSEEKSCSEVQP 437 Query: 242 TVE---VKLPVSKAIISPPGSSKPSAEEE 165 T + VS++ P +K +AEE+ Sbjct: 438 TKREEPLDFEVSRSATMPVEGTKVAAEEK 466 >ref|XP_006345796.1| PREDICTED: double-stranded RNA-binding protein 2-like [Solanum tuberosum] Length = 506 Score = 61.6 bits (148), Expect = 1e-07 Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 13/149 (8%) Frame = -1 Query: 572 PPIP-STQSTLLTRPPAFGTAPPVCVRQAVPVHAAVKVEKARFSGPPTSRAEEVQVSRAA 396 PP+P S+Q + RPP G APPVC+RQAVPV+AA V P R A Sbjct: 322 PPLPQSSQPPRVMRPPGLGLAPPVCIRQAVPVYAAPPVRAEEL--PTLDRVMRHSGLGVA 379 Query: 395 PGRLDESPFSKPPLIGVEESLSSMSPPI---------TIAPNAEAPSVQLEIPSSTEVGP 243 P S PPL+ V+E L+S +P I + AE+ E S +EV P Sbjct: 380 PVYAVPSVPKAPPLL-VDEPLASKAPEIQVLDLPTCKAVLGKAESLHDHSEEKSCSEVQP 438 Query: 242 TVE---VKLPVSKAIISPPGSSKPSAEEE 165 T + VS++ P +K +A+E+ Sbjct: 439 TKREEPLDFEVSRSATMPVEGTKVAAKEK 467