BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00015475
         (562 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   286   2e-75
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   286   2e-75
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   281   1e-73
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     276   3e-72
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...   263   2e-68
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   260   2e-67
emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]   259   2e-67
gb|ABW74566.1| integrase [Boechera divaricarpa]                       258   9e-67
gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]    255   5e-66
emb|CAN65499.1| hypothetical protein VITISV_010671 [Vitis vinifera]   255   6e-66
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   253   2e-65
emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]   253   2e-65
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      253   3e-65
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]       252   4e-65
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   252   4e-65
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   252   4e-65
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]   251   9e-65
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   249   3e-64
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              249   3e-64
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]      249   4e-64

>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  286 bits (732), Expect = 2e-75
 Identities = 141/186 (75%), Positives = 162/186 (87%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P+D+E IGVKWVYKTK NPDGSVQKYKARLVAKG+ Q+ GI Y ET+APVARL+TIR 
Sbjct: 742  DRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRT 801

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            +IALAAQK+WKIYQLDVKSAFLNGYL+EEIYVEQP+GF VQG E+KV RLKKALYGLKQA
Sbjct: 802  IIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQA 861

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYS+ID YF + GF +S SEPTLY+   GT + LIVSLYVDDLI+TGN+E M+ +FK
Sbjct: 862  PRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGT-DILIVSLYVDDLIYTGNSEKMMQDFK 920

Query: 545  EDMMKT 562
            +DMM T
Sbjct: 921  KDMMHT 926


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  286 bits (732), Expect = 2e-75
 Identities = 141/186 (75%), Positives = 162/186 (87%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P+D+E IGVKWVYKTK NPDGSVQKYKARLVAKG+ Q+ GI Y ET+APVARL+TIR 
Sbjct: 879  DRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRT 938

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            +IALAAQK+WKIYQLDVKSAFLNGYL+EEIYVEQP+GF VQG E+KV RLKKALYGLKQA
Sbjct: 939  IIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQA 998

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYS+ID YF + GF +S SEPTLY+   GT + LIVSLYVDDLI+TGN+E M+ +FK
Sbjct: 999  PRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGT-DILIVSLYVDDLIYTGNSEKMMQDFK 1057

Query: 545  EDMMKT 562
            +DMM T
Sbjct: 1058 KDMMHT 1063


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  281 bits (718), Expect = 1e-73
 Identities = 139/186 (74%), Positives = 160/186 (86%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P+D+E IGVKWVYKTK N DGSVQKYKARLVAKG+ Q+ GI Y ET+APVARL+TIR 
Sbjct: 669  DRPRDREVIGVKWVYKTKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRT 728

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            +IALAAQK+WKIYQLDVKSAFLNGYL+EEIYVEQP+GF VQG E+KV RLKKALYGLKQA
Sbjct: 729  IIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQA 788

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PR WYS+ID YF + GF +S SEPTLY+   GT + LIVSLYVDDLI+TGN+E M+ +FK
Sbjct: 789  PRVWYSQIDKYFIQKGFAKSISEPTLYVNKTGT-DILIVSLYVDDLIYTGNSEKMMQDFK 847

Query: 545  EDMMKT 562
            +DMM T
Sbjct: 848  KDMMHT 853


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  276 bits (706), Expect = 3e-72
 Identities = 137/186 (73%), Positives = 159/186 (85%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P+D+E IGVKWVYKTK NPDGSVQKYKARLVAKG+ Q+ GI Y ET+A VARL+TI  
Sbjct: 663  DRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAHVARLETIHT 722

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            +IALAAQK+WKIYQLDVKSAFLNGYL+EEIYVEQP+ F VQG E+KV RLKKALYGLKQA
Sbjct: 723  IIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPERFSVQGGENKVFRLKKALYGLKQA 782

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYS+ID YF + GF +S SEP LY+K  GT + LIVSLYVDDLI+TGN+E ++ +FK
Sbjct: 783  PRAWYSQIDKYFIQKGFAKSISEPILYVKKTGT-DILIVSLYVDDLIYTGNSEKLMQDFK 841

Query: 545  EDMMKT 562
            +DMM T
Sbjct: 842  KDMMHT 847


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score =  263 bits (673), Expect = 2e-68
 Identities = 132/186 (70%), Positives = 153/186 (82%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P+D++ IGVKWVYKTK NPDGSVQKYKARLVAKG+ Q+ GI Y ET+APVARL+TIR 
Sbjct: 802  DRPRDRKVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRT 861

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            +IALAAQK+WKIYQLDVKSAFLNGYL+EEIYVEQP+GF VQG E+KV RLKKALYGLKQA
Sbjct: 862  IIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQA 921

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYS+ID YF + GF +S S            + LIVSLYVDDLI+T N+E M+ +FK
Sbjct: 922  PRAWYSQIDQYFIQKGFAKSIS-----------TDILIVSLYVDDLIYTANSEKMMQDFK 970

Query: 545  EDMMKT 562
            +DMM T
Sbjct: 971  KDMMHT 976


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  260 bits (664), Expect = 2e-67
 Identities = 127/189 (67%), Positives = 156/189 (82%), Gaps = 6/189 (3%)
 Frame = +2

Query: 11   PQDKEAIGVKWVYKTK------FNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLD 172
            P+DKE IGVKW+++ K      ++ DG VQ+ KARLVAKGY+QQ G  + ETFAPVARLD
Sbjct: 938  PKDKEIIGVKWIFRVKWIFRXKYHSDGRVQRLKARLVAKGYSQQPGXDFHETFAPVARLD 997

Query: 173  TIRALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYG 352
            TIR +IA+AAQK W +YQLD+KSAFLNG LE EIYVEQPQGFVV G+E+KV +LKKALYG
Sbjct: 998  TIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEXEIYVEQPQGFVVDGEENKVYKLKKALYG 1057

Query: 353  LKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMI 532
            LKQAPRAWY++ID YF E GF RS+SEPTLY+K++  +  LIV+LYVDDLIFTGN+E M+
Sbjct: 1058 LKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMV 1117

Query: 533  MEFKEDMMK 559
             +F+ +MMK
Sbjct: 1118 EKFRNEMMK 1126


>emb|CAN77815.1| hypothetical protein VITISV_023977 [Vitis vinifera]
          Length = 1120

 Score =  259 bits (663), Expect = 2e-67
 Identities = 127/186 (68%), Positives = 154/186 (82%), Gaps = 1/186 (0%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D PQ ++ IGVKWVY+TK N DGSV KYKARLV KGY+Q +G+ +SE FAPVARLDTIR 
Sbjct: 665  DRPQHRKVIGVKWVYRTKLNADGSVNKYKARLVVKGYSQVFGVDFSEXFAPVARLDTIRM 724

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            L+AL AQK WK YQLDVK AFLNGYL+EEIYVEQP+GF V+G+E+KV  LKKALYGLKQA
Sbjct: 725  LLALTAQKGWKTYQLDVKXAFLNGYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQA 784

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTN-NTLIVSLYVDDLIFTGNNENMIMEF 541
            PRAWYSRID++   LGF +S SE TLY+K  GT+ N ++VS+YVDDL+ TG+NE ++ EF
Sbjct: 785  PRAWYSRIDEHLQSLGFVKSPSEATLYVK--GTDANLIVVSVYVDDLLVTGSNEKLVKEF 842

Query: 542  KEDMMK 559
            K +M+K
Sbjct: 843  KAEMLK 848


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  258 bits (658), Expect = 9e-67
 Identities = 117/185 (63%), Positives = 150/185 (81%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            +LP++K +IGVKWV+KTK+  D ++QKYKARLV KGYAQ+YG+ Y +TF+PVAR DT+R 
Sbjct: 683  ELPEEKHSIGVKWVFKTKYQADDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDTLRT 742

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            L+AL A   W IYQ DVKSAFLNG L EE+YV+QP+GF+V+G+E  V RL KALYGLKQA
Sbjct: 743  LLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQA 802

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWY++ID YF E GF RS+SEPTLYIK QG  + L+V LYVDD+I+ G++ +++ EFK
Sbjct: 803  PRAWYNKIDSYFAETGFERSKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFK 862

Query: 545  EDMMK 559
              MM+
Sbjct: 863  ASMME 867


>gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]
          Length = 2077

 Score =  255 bits (652), Expect = 5e-66
 Identities = 123/181 (67%), Positives = 151/181 (83%)
 Frame = +2

Query: 11   PQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRALI 190
            P DK  IGVKWV++TK NPDGSV K K RLV KGY+QQ+G+ +S+TFAPVAR DTIR LI
Sbjct: 962  PTDKRVIGVKWVFRTKLNPDGSVNKLKVRLVVKGYSQQFGVDFSDTFAPVARHDTIRLLI 1021

Query: 191  ALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPR 370
            AL AQK WKI+QLDVKSAFLNGYL+EEI+VEQP  F+ +G EDKV +LKKALYGLKQAPR
Sbjct: 1022 ALVAQKGWKIFQLDVKSAFLNGYLKEEIFVEQPPCFLKKGNEDKVYQLKKALYGLKQAPR 1081

Query: 371  AWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKED 550
            AWYSRIDD+  +LGF+RS SE TLY++  G ++ LI+SLYVDDL+ TG+N  ++ +FK++
Sbjct: 1082 AWYSRIDDHLLQLGFKRSPSEATLYVQQAG-DDLLIISLYVDDLLITGSNITLVQKFKKE 1140

Query: 551  M 553
            M
Sbjct: 1141 M 1141


>emb|CAN65499.1| hypothetical protein VITISV_010671 [Vitis vinifera]
          Length = 750

 Score =  255 bits (651), Expect = 6e-66
 Identities = 126/180 (70%), Positives = 150/180 (83%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P  K+AIGVKWVY+TK N DGS+ K+K+RLV KGYAQ +G+ +SETFAPV RLDTIR 
Sbjct: 546  DKPTHKKAIGVKWVYRTKLNCDGSINKHKSRLVVKGYAQMFGVDFSETFAPVGRLDTIRI 605

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            L+ALAAQ  WKIYQ DVKSAFLNGYLEEEI+VEQP+GFVV+GKEDKV  LKKALYGLKQA
Sbjct: 606  LLALAAQMGWKIYQPDVKSAFLNGYLEEEIFVEQPEGFVVKGKEDKVYHLKKALYGLKQA 665

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYSRI+ Y   LGF++SQSE TLYI+     + LI+SLYVDDL+ TG+N+ ++ +FK
Sbjct: 666  PRAWYSRINAYLLSLGFKKSQSESTLYIRKINA-DILIISLYVDDLLVTGSNQCLMDKFK 724


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  253 bits (646), Expect = 2e-65
 Identities = 119/185 (64%), Positives = 148/185 (80%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            +LP+DK  IGVKWV++TK+  DGS+QK+KARLVAKGYAQQ+G+ Y +TF+PVAR +T+R 
Sbjct: 781  ELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRT 840

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            L+ALAA   W  YQ DVKSAFLNG L EE+YV Q +GF+V  KE+ V RLKKALYGLKQA
Sbjct: 841  LLALAAHMHWCXYQFDVKSAFLNGELVEEVYVSQXEGFIVPXKEEHVYRLKKALYGLKQA 900

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYS+ID YF E GF RS+SEP LY+K QG N+ LI+ LYVDD+I+ G++ ++I EFK
Sbjct: 901  PRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFK 960

Query: 545  EDMMK 559
              M K
Sbjct: 961  ACMKK 965


>emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]
          Length = 1072

 Score =  253 bits (646), Expect = 2e-65
 Identities = 124/183 (67%), Positives = 151/183 (82%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P  K+ IGVKWVY+TK N DGS+ K+KARLV KGYAQ +G+ +SETFAPVARLDTIR 
Sbjct: 681  DRPSHKKPIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRM 740

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            L+ALAAQ++WKIY+LDVKSAFLNGYLEEEI+VEQP+GF ++GKE+KV  LKKALYGL+QA
Sbjct: 741  LLALAAQRKWKIYKLDVKSAFLNGYLEEEIFVEQPEGFAIKGKEEKVYLLKKALYGLRQA 800

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYSRID +   LGF +S SE TLYI+ +   + LIVSLYVDDL+ TG+N   + +FK
Sbjct: 801  PRAWYSRIDTHLLTLGFHKSLSEFTLYIE-KIEEDILIVSLYVDDLLVTGSNAGFVNKFK 859

Query: 545  EDM 553
             +M
Sbjct: 860  AEM 862


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  253 bits (645), Expect = 3e-65
 Identities = 125/184 (67%), Positives = 149/184 (80%)
 Frame = +2

Query: 8   LPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRAL 187
           LP   +AIGVKWVYK K N  G V++YKARLVAKGY+Q+ GI Y E FAPVARL+T+R +
Sbjct: 33  LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLI 92

Query: 188 IALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAP 367
           I+LAAQK W+I+Q+DVKSAFLNG LEEE+Y+EQPQG++V+G+EDKVLRLKKALYGLKQAP
Sbjct: 93  ISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAP 152

Query: 368 RAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKE 547
           RAW +RID YF E GF +   E  LYIKTQ  N+ LI  LYVDDLIFTGNN  M  +FK+
Sbjct: 153 RAWNTRIDKYFNEKGFIKCPYEHALYIKTQ-NNDILIACLYVDDLIFTGNNPIMFEDFKK 211

Query: 548 DMMK 559
           +M K
Sbjct: 212 EMTK 215


>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score =  252 bits (644), Expect = 4e-65
 Identities = 125/184 (67%), Positives = 148/184 (80%)
 Frame = +2

Query: 8   LPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRAL 187
           LP   +AIGVKWVYK K N  G V++YKARLVAKGY+Q  GI Y E FAPVARL+T+R +
Sbjct: 33  LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQSAGIDYDEVFAPVARLETVRLI 92

Query: 188 IALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAP 367
           I+LAAQ +W+I+Q+DVKSAFLNG LEEE+Y+EQPQG++V+GKEDKVLRLKKALYGLKQAP
Sbjct: 93  ISLAAQNRWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGKEDKVLRLKKALYGLKQAP 152

Query: 368 RAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKE 547
           RAW +RID YF E  F +   E  LYIKTQ  NN LI  LYVDDLIFTG+N +M  EFK+
Sbjct: 153 RAWNTRIDKYFKEKSFIKCPYEHALYIKTQ-NNNILIACLYVDDLIFTGSNPSMFEEFKK 211

Query: 548 DMMK 559
           +M K
Sbjct: 212 EMTK 215


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  252 bits (644), Expect = 4e-65
 Identities = 117/185 (63%), Positives = 148/185 (80%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            +LP+DK  IGVKWV++TK+  DGS+QK+KARLVAKGYAQQ+G+ Y +TF+PVAR +T+R 
Sbjct: 952  ELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRT 1011

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            L+ALAA   W +YQ DVKSAFLNG L EE+Y  QP+GF+V  KE+ V RLK ALYGLKQA
Sbjct: 1012 LLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQA 1071

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYS+ID YF E GF +S+SEP LY+K QG N+ LI+ LYVDD+I+ G++ ++I EFK
Sbjct: 1072 PRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFK 1131

Query: 545  EDMMK 559
              M K
Sbjct: 1132 ACMKK 1136


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  252 bits (644), Expect = 4e-65
 Identities = 114/185 (61%), Positives = 153/185 (82%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P+ K  IG+KWV++TK+N DGS+QK+KARLVAKGY+QQ G+ + ETF+PVAR +T+R 
Sbjct: 852  DAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRV 911

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            ++ALAAQ    +YQ DVKSAFLNG LEEE+YV QPQGF++ G E+KV +L+KALYGLKQA
Sbjct: 912  VLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQA 971

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYS+ID +F   GFRRS +EPTLY+K QGT+  L+V LYVDD+I+ G++++++ +FK
Sbjct: 972  PRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFK 1031

Query: 545  EDMMK 559
             +MM+
Sbjct: 1032 SNMMR 1036


>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
          Length = 1102

 Score =  251 bits (641), Expect = 9e-65
 Identities = 124/183 (67%), Positives = 150/183 (81%)
 Frame = +2

Query: 5    DLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRA 184
            D P+ K AIGVKWVY+TK N DGS+ K+KARLV KGYAQ +G+ +SETFAPVARLDTIR 
Sbjct: 637  DKPRHKRAIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRM 696

Query: 185  LIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQA 364
            L+ALAAQK W I+Q+DVKSAFLNGYLEEEI+VEQP+GF+V+G E+KV  LKKALYGLKQA
Sbjct: 697  LLALAAQKGWNIHQMDVKSAFLNGYLEEEIFVEQPEGFIVKGMEEKVYLLKKALYGLKQA 756

Query: 365  PRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFK 544
            PRAWYSRID +   LGF +S SE TLY + +  + TL+VSLYVDDL+ TG++   I  FK
Sbjct: 757  PRAWYSRIDSHLLGLGFTKSLSEFTLYFR-KVCDETLVVSLYVDDLLVTGSSMKQIDNFK 815

Query: 545  EDM 553
            ++M
Sbjct: 816  KEM 818


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  249 bits (636), Expect = 3e-64
 Identities = 121/185 (65%), Positives = 147/185 (79%)
 Frame = +2

Query: 2    TDLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIR 181
            T LP+  + IGVKWV+KTK+N  G V K KARLVAKGYAQQ+GI Y+E +APVAR DTIR
Sbjct: 708  TSLPKGVKKIGVKWVFKTKYNEHGKVDKCKARLVAKGYAQQFGIDYTEVYAPVARWDTIR 767

Query: 182  ALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQ 361
             ++ALAAQK W I+QLDVKSAFL+G L E++Y+EQPQGF  +G+E+KV +LKKALYGLKQ
Sbjct: 768  LIVALAAQKNWTIFQLDVKSAFLHGELNEDVYIEQPQGFEQKGEEEKVYKLKKALYGLKQ 827

Query: 362  APRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEF 541
            APRAWYSRI+ YF + GF R   E TL++K +G    LIVSLYVDD IFTGN+ +MI +F
Sbjct: 828  APRAWYSRIEGYFVKEGFERCSYEHTLFVKIEGEGKMLIVSLYVDDQIFTGNDMSMIEKF 887

Query: 542  KEDMM 556
            K  MM
Sbjct: 888  KSSMM 892


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  249 bits (636), Expect = 3e-64
 Identities = 118/184 (64%), Positives = 148/184 (80%)
 Frame = +2

Query: 2    TDLPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIR 181
            T+LPQ+K+ IGVKWV+KTKFNPDGS+ ++KARLV KG+AQ  G+ Y +TFAPVAR DTIR
Sbjct: 1307 TELPQNKKEIGVKWVFKTKFNPDGSIFRHKARLVVKGFAQVAGVDYDDTFAPVARHDTIR 1366

Query: 182  ALIALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQ 361
             L+ALA QK+WK+Y LDVK AFLNG L EEIYV+QP+GFVV   E KV +L KALYGLKQ
Sbjct: 1367 LLLALAGQKKWKVYHLDVKFAFLNGILLEEIYVQQPEGFVVTSHEHKVYKLHKALYGLKQ 1426

Query: 362  APRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEF 541
            APRAWY+RID Y  +LGF+RS++E TLY+K       L++SLYVDD++ TG+N  ++ EF
Sbjct: 1427 APRAWYNRIDTYLIQLGFKRSENEVTLYLKQDQDGLQLVISLYVDDMLVTGSNVKLLAEF 1486

Query: 542  KEDM 553
            K +M
Sbjct: 1487 KREM 1490


>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  249 bits (635), Expect = 4e-64
 Identities = 124/184 (67%), Positives = 148/184 (80%)
 Frame = +2

Query: 8   LPQDKEAIGVKWVYKTKFNPDGSVQKYKARLVAKGYAQQYGIVYSETFAPVARLDTIRAL 187
           LP   +AIGVKWVYK K N  G V++YKARLVAKGY+Q+ GI Y E FAPVARL+T+R +
Sbjct: 33  LPNGHKAIGVKWVYKAKNNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLI 92

Query: 188 IALAAQKQWKIYQLDVKSAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAP 367
           I+LAAQK W+I+Q+DVKSAFLNG LEEE+Y+EQPQG++V+G+EDKVLRLKKAL GLKQAP
Sbjct: 93  ISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALNGLKQAP 152

Query: 368 RAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKE 547
           RAW +RID YF E GF +   E  LYIKTQ  N+ LI  LYVDDLIFTGNN  M  +FK+
Sbjct: 153 RAWNTRIDKYFKEKGFIKCPYEHALYIKTQ-NNDILIACLYVDDLIFTGNNPIMFEDFKK 211

Query: 548 DMMK 559
           +M K
Sbjct: 212 EMTK 215