BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00015278
         (343 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   119   3e-25
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              119   3e-25
gb|EOY30355.1| CFIM-25 isoform 3 [Theobroma cacao]                    118   7e-25
gb|EOY30353.1| CFIM-25 isoform 1 [Theobroma cacao]                    118   7e-25
gb|EOY30354.1| CFIM-25 isoform 2, partial [Theobroma cacao]           118   9e-25
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   117   2e-24
ref|XP_004287592.1| PREDICTED: cleavage and polyadenylation spec...   116   3e-24
ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citr...   116   4e-24
ref|XP_006451544.1| hypothetical protein CICLE_v10009459mg [Citr...   116   4e-24
gb|EMJ03747.1| hypothetical protein PRUPE_ppa011170mg [Prunus pe...   113   2e-23
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec...   113   3e-23
ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin...   112   4e-23
ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Popu...   112   7e-23
ref|XP_006294960.1| hypothetical protein CARUB_v10024016mg [Caps...   108   6e-22
gb|EXB38893.1| hypothetical protein L484_027328 [Morus notabilis]     107   1e-21
ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana] gi|...   106   4e-21
ref|XP_006412803.1| hypothetical protein EUTSA_v10026187mg [Eutr...   105   5e-21
gb|ESW10683.1| hypothetical protein PHAVU_009G229700g [Phaseolus...   102   4e-20
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab...   101   9e-20
ref|XP_006342337.1| PREDICTED: cleavage and polyadenylation spec...    99   6e-19

>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  119 bits (299), Expect = 3e-25
 Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = +3

Query: 87  ENGNSHQSDESN-VLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAA 263
           +   S   D SN VLDIYPLSCYYFGS+     K ET++DR+LRMK+NY  YG R CV A
Sbjct: 77  DGDRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVA 136

Query: 264 VIVVELFKHPHLLLLQVQNSIYKLPG 341
           VI+VELFKHPHLLLLQV+NS +KLPG
Sbjct: 137 VILVELFKHPHLLLLQVKNSFFKLPG 162


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  119 bits (299), Expect = 3e-25
 Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = +3

Query: 87  ENGNSHQSDESN-VLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAA 263
           +   S   D SN VLDIYPLSCYYFGS+     K ET++DR+LRMK+NY  YG R CV A
Sbjct: 84  DGDRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVA 143

Query: 264 VIVVELFKHPHLLLLQVQNSIYKLPG 341
           VI+VELFKHPHLLLLQV+NS +KLPG
Sbjct: 144 VILVELFKHPHLLLLQVKNSFFKLPG 169


>gb|EOY30355.1| CFIM-25 isoform 3 [Theobroma cacao]
          Length = 182

 Score =  118 bits (296), Expect = 7e-25
 Identities = 56/89 (62%), Positives = 70/89 (78%)
 Frame = +3

Query: 75  SAVFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNC 254
           +A   N +S   D    +DIYPLSCYYFGS+ +  FK+ET+SDR+ RMK+NY A+G+R  
Sbjct: 9   AAATVNDHSSSGDHRKEVDIYPLSCYYFGSKETIVFKDETLSDRIKRMKSNYAAHGLRTS 68

Query: 255 VAAVIVVELFKHPHLLLLQVQNSIYKLPG 341
           V AVI+VELFKHPHLLLLQV+NSI+KLPG
Sbjct: 69  VEAVILVELFKHPHLLLLQVRNSIFKLPG 97


>gb|EOY30353.1| CFIM-25 isoform 1 [Theobroma cacao]
          Length = 219

 Score =  118 bits (296), Expect = 7e-25
 Identities = 56/89 (62%), Positives = 70/89 (78%)
 Frame = +3

Query: 75  SAVFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNC 254
           +A   N +S   D    +DIYPLSCYYFGS+ +  FK+ET+SDR+ RMK+NY A+G+R  
Sbjct: 9   AAATVNDHSSSGDHRKEVDIYPLSCYYFGSKETIVFKDETLSDRIKRMKSNYAAHGLRTS 68

Query: 255 VAAVIVVELFKHPHLLLLQVQNSIYKLPG 341
           V AVI+VELFKHPHLLLLQV+NSI+KLPG
Sbjct: 69  VEAVILVELFKHPHLLLLQVRNSIFKLPG 97


>gb|EOY30354.1| CFIM-25 isoform 2, partial [Theobroma cacao]
          Length = 242

 Score =  118 bits (295), Expect = 9e-25
 Identities = 55/84 (65%), Positives = 68/84 (80%)
 Frame = +3

Query: 90  NGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVI 269
           N +S   D    +DIYPLSCYYFGS+ +  FK+ET+SDR+ RMK+NY A+G+R  V AVI
Sbjct: 2   NDHSSSGDHRKEVDIYPLSCYYFGSKETIVFKDETLSDRIKRMKSNYAAHGLRTSVEAVI 61

Query: 270 VVELFKHPHLLLLQVQNSIYKLPG 341
           +VELFKHPHLLLLQV+NSI+KLPG
Sbjct: 62  LVELFKHPHLLLLQVRNSIFKLPG 85


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  117 bits (292), Expect = 2e-24
 Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = +3

Query: 81  VFENGNSHQS--DESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNC 254
           V  N N H++  D+  VLDIYPLS YYFGS+    F++ET+ DRV RMK+NY A+G+R C
Sbjct: 6   VVVNNNHHEASRDQGFVLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTC 65

Query: 255 VAAVIVVELFKHPHLLLLQVQNSIYKLPG 341
           V AVI+VELFKHPHLLLLQ++NSI+KLPG
Sbjct: 66  VEAVILVELFKHPHLLLLQIKNSIFKLPG 94


>ref|XP_004287592.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Fragaria vesca subsp. vesca]
          Length = 218

 Score =  116 bits (291), Expect = 3e-24
 Identities = 54/84 (64%), Positives = 67/84 (79%)
 Frame = +3

Query: 90  NGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVI 269
           NG  H   +S  LDIYPLSCYYFGS+ +  FK+ET+ DRV R+ +NY AYG+R CV AV+
Sbjct: 15  NGGDHT--QSRQLDIYPLSCYYFGSKEAIPFKDETLDDRVQRLNSNYAAYGLRTCVEAVM 72

Query: 270 VVELFKHPHLLLLQVQNSIYKLPG 341
           +VELFKHPH+LLLQV+N I+KLPG
Sbjct: 73  LVELFKHPHILLLQVRNCIFKLPG 96


>ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
           gi|568843220|ref|XP_006475514.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           isoform X1 [Citrus sinensis] gi|557554771|gb|ESR64785.1|
           hypothetical protein CICLE_v10009459mg [Citrus
           clementina]
          Length = 214

 Score =  116 bits (290), Expect = 4e-24
 Identities = 53/73 (72%), Positives = 66/73 (90%)
 Frame = +3

Query: 123 VLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVIVVELFKHPHLL 302
           V+DIYPLS YYFGS+ +  FK+ET+ +RVLRMK+NYDA+G+R CV AV++VELFKHPHLL
Sbjct: 20  VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79

Query: 303 LLQVQNSIYKLPG 341
           LLQV+NSI+KLPG
Sbjct: 80  LLQVRNSIFKLPG 92


>ref|XP_006451544.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
           gi|557554770|gb|ESR64784.1| hypothetical protein
           CICLE_v10009459mg [Citrus clementina]
          Length = 196

 Score =  116 bits (290), Expect = 4e-24
 Identities = 53/73 (72%), Positives = 66/73 (90%)
 Frame = +3

Query: 123 VLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVIVVELFKHPHLL 302
           V+DIYPLS YYFGS+ +  FK+ET+ +RVLRMK+NYDA+G+R CV AV++VELFKHPHLL
Sbjct: 20  VVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLL 79

Query: 303 LLQVQNSIYKLPG 341
           LLQV+NSI+KLPG
Sbjct: 80  LLQVRNSIFKLPG 92


>gb|EMJ03747.1| hypothetical protein PRUPE_ppa011170mg [Prunus persica]
          Length = 221

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/85 (61%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
 Frame = +3

Query: 90  NGNSHQS-DESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAV 266
           NG  H + D+S +LDIYPLS YYF S+ +   K+E+++DR+ RMK+NY AYG+R CV AV
Sbjct: 15  NGLDHDNGDQSRILDIYPLSSYYFSSKEALPIKDESVADRLQRMKSNYAAYGLRTCVEAV 74

Query: 267 IVVELFKHPHLLLLQVQNSIYKLPG 341
           I+VELFKHPH+LLLQV+N ++KLPG
Sbjct: 75  ILVELFKHPHILLLQVRNCMFKLPG 99


>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 217

 Score =  113 bits (282), Expect = 3e-23
 Identities = 51/85 (60%), Positives = 70/85 (82%)
 Frame = +3

Query: 87  ENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAV 266
           ++ ++  + + + +DIYPLS YYFGS+    FK+ET+SDRVLRMK+NY A+G+R CV AV
Sbjct: 11  DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAV 70

Query: 267 IVVELFKHPHLLLLQVQNSIYKLPG 341
           ++VELFKHPHLLL Q++NSI+KLPG
Sbjct: 71  MLVELFKHPHLLLFQIRNSIFKLPG 95


>ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
           gi|255640824|gb|ACU20695.1| unknown [Glycine max]
          Length = 216

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/82 (65%), Positives = 65/82 (79%)
 Frame = +3

Query: 96  NSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVIVV 275
           NS   D+S   DIYPLS YYFGS+ +   K+ T+ DRVLRMK+NY A G+R CV AV++V
Sbjct: 18  NSGNDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLV 77

Query: 276 ELFKHPHLLLLQVQNSIYKLPG 341
           ELFKHPHLLLLQ++NSIYKLPG
Sbjct: 78  ELFKHPHLLLLQIRNSIYKLPG 99


>ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Populus trichocarpa]
           gi|550336365|gb|EEE91798.2| hypothetical protein
           POPTR_0006s14840g [Populus trichocarpa]
          Length = 258

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/94 (57%), Positives = 71/94 (75%)
 Frame = +3

Query: 60  KMDDPSAVFENGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAY 239
           KM D S    + N+HQS    V++IYPL  YYFGS+   +F++ETI+DRV RMK+N+ A 
Sbjct: 48  KMGDHSVTVTDNNNHQS---TVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFSAR 104

Query: 240 GMRNCVAAVIVVELFKHPHLLLLQVQNSIYKLPG 341
           G+R  V AV++VELFKHPHLLLLQV+N+ +KLPG
Sbjct: 105 GLRTSVQAVMLVELFKHPHLLLLQVRNAFFKLPG 138


>ref|XP_006294960.1| hypothetical protein CARUB_v10024016mg [Capsella rubella]
           gi|482563668|gb|EOA27858.1| hypothetical protein
           CARUB_v10024016mg [Capsella rubella]
          Length = 222

 Score =  108 bits (271), Expect = 6e-22
 Identities = 49/77 (63%), Positives = 64/77 (83%)
 Frame = +3

Query: 111 DESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVIVVELFKH 290
           D   ++D+YPLS YYFGSR +   K+E ISDRV+R+K+NY A+G+R CV AV++VELFKH
Sbjct: 24  DHDVMVDLYPLSSYYFGSRDALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKH 83

Query: 291 PHLLLLQVQNSIYKLPG 341
           PH+LLLQ +NSI+KLPG
Sbjct: 84  PHVLLLQFRNSIFKLPG 100


>gb|EXB38893.1| hypothetical protein L484_027328 [Morus notabilis]
          Length = 221

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/92 (60%), Positives = 70/92 (76%), Gaps = 7/92 (7%)
 Frame = +3

Query: 87  ENGNSHQSDESN-VLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANY------DAYGM 245
           EN N +Q+  S+ VLDIYPLS YYFGS+ +   K+E ++DR+LRMK+ Y       A G+
Sbjct: 8   ENHNQNQNQTSSLVLDIYPLSSYYFGSKEALPLKDENLADRLLRMKSKYHFSTGYSARGL 67

Query: 246 RNCVAAVIVVELFKHPHLLLLQVQNSIYKLPG 341
           R CV AVI+VELFKHPHLLLLQV+NSI+KLPG
Sbjct: 68  RACVEAVILVELFKHPHLLLLQVRNSIFKLPG 99


>ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
           gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60
           [Arabidopsis thaliana] gi|20147173|gb|AAM10303.1|
           AT4g29820/F27B13_60 [Arabidopsis thaliana]
           gi|21554114|gb|AAM63194.1| mRNA cleavage factor
           subunit-like protein [Arabidopsis thaliana]
           gi|332660282|gb|AEE85682.1| CFIM-25-like protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  106 bits (264), Expect = 4e-21
 Identities = 47/73 (64%), Positives = 63/73 (86%)
 Frame = +3

Query: 123 VLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVIVVELFKHPHLL 302
           ++D+YPLS YYFGS+ +   K+E ISDRV+R+K+NY A+G+R CV AV++VELFKHPH+L
Sbjct: 28  MVDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVL 87

Query: 303 LLQVQNSIYKLPG 341
           LLQ +NSI+KLPG
Sbjct: 88  LLQYRNSIFKLPG 100


>ref|XP_006412803.1| hypothetical protein EUTSA_v10026187mg [Eutrema salsugineum]
           gi|557113973|gb|ESQ54256.1| hypothetical protein
           EUTSA_v10026187mg [Eutrema salsugineum]
          Length = 222

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/73 (65%), Positives = 61/73 (83%)
 Frame = +3

Query: 123 VLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVIVVELFKHPHLL 302
           ++D+YPLS YYFGSR +   K+E ISDRV R+K+NY A+G+R CV AV++VELFKHPH L
Sbjct: 28  IVDLYPLSSYYFGSRDALRVKDENISDRVDRLKSNYAAHGLRTCVEAVLLVELFKHPHAL 87

Query: 303 LLQVQNSIYKLPG 341
           LLQ +NSI+KLPG
Sbjct: 88  LLQYRNSIFKLPG 100


>gb|ESW10683.1| hypothetical protein PHAVU_009G229700g [Phaseolus vulgaris]
          Length = 217

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/84 (58%), Positives = 63/84 (75%)
 Frame = +3

Query: 90  NGNSHQSDESNVLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVI 269
           +GN    D++   DIYPLS YYFGS+ +  FK+ T    +LR+++NY A G+R  V AV+
Sbjct: 12  DGNRGNEDQNLEFDIYPLSSYYFGSKDAIPFKDHTQHHHLLRIQSNYAARGLRTSVEAVL 71

Query: 270 VVELFKHPHLLLLQVQNSIYKLPG 341
           +VELFKHPHLLLLQV+NSIYKLPG
Sbjct: 72  LVELFKHPHLLLLQVRNSIYKLPG 95


>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
           lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
           ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  101 bits (252), Expect = 9e-20
 Identities = 45/73 (61%), Positives = 61/73 (83%)
 Frame = +3

Query: 123 VLDIYPLSCYYFGSRGSASFKNETISDRVLRMKANYDAYGMRNCVAAVIVVELFKHPHLL 302
           ++++YPLS YYF SR +   K+E ISDRV+R+K+NY A+G+R CV AV++VEL KHPH+L
Sbjct: 29  MVELYPLSSYYFSSRDALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELLKHPHVL 88

Query: 303 LLQVQNSIYKLPG 341
           LLQ +NSI+KLPG
Sbjct: 89  LLQYRNSIFKLPG 101


>ref|XP_006342337.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Solanum tuberosum]
          Length = 202

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/75 (62%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = +3

Query: 120 NVLDIYPLSCYYFGSRGSASFKNE-TISDRVLRMKANYDAYGMRNCVAAVIVVELFKHPH 296
           +VLDIYPL+ YYFGS+ S   K E T+  R+ R+K NY+ +G+R CV AVI+V+LFKHPH
Sbjct: 7   DVLDIYPLNHYYFGSKESLPLKEEETLDHRIQRLKFNYNTHGIRTCVQAVILVDLFKHPH 66

Query: 297 LLLLQVQNSIYKLPG 341
           LLLLQV++S+YKLPG
Sbjct: 67  LLLLQVRHSMYKLPG 81