BLASTX nr result
ID: Rehmannia24_contig00015231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00015231
(1492 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr... 155 3e-35
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr... 155 3e-35
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr... 155 3e-35
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma... 154 7e-35
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma... 147 9e-33
emb|CBI35661.3| unnamed protein product [Vitis vinifera] 147 2e-32
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma... 142 3e-31
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly... 142 3e-31
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 130 1e-27
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric... 127 2e-26
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma... 115 6e-23
ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal doma... 114 8e-23
ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal doma... 113 2e-22
ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal doma... 110 1e-21
ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal doma... 108 6e-21
ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphat... 105 4e-20
gb|ESW11309.1| hypothetical protein PHAVU_008G019000g [Phaseolus... 105 5e-20
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l... 96 5e-17
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l... 90 3e-15
ref|NP_180912.2| RNA polymerase II C-terminal domain phosphatase... 90 3e-15
>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3-like
[Citrus sinensis] gi|557541056|gb|ESR52100.1|
hypothetical protein CICLE_v10030535mg [Citrus
clementina]
Length = 1234
Score = 155 bits (393), Expect = 3e-35
Identities = 118/345 (34%), Positives = 168/345 (48%), Gaps = 19/345 (5%)
Frame = +1
Query: 469 DVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXARV 648
DVEEGEISD+ASVEEI+EE F KQ + ARV
Sbjct: 4 DVEEGEISDTASVEEISEEDFKIKQ-----------EEVVKVVKETKPIKVGGGEAAARV 52
Query: 649 WTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXX 825
WTMRDLY KY + GL+NLAWAQAV NKPL ++FVM +
Sbjct: 53 WTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDD------------- 99
Query: 826 XXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVEN---KDSNVEVKNEVG----GD 984
V VVE DS E++ E G G+
Sbjct: 100 ---------VSKRSSPASSVASVNSGAAAGKDDKKVVEKVVIDDSGDEIEKEEGELEEGE 150
Query: 985 VN-ELDERERSKRVNLIKEELESLNVADAQK----------SYDRLCSSLETTAVSLQKM 1131
+ +L+ K +KEE++ +NV ++ S++ +CS LE T SL+++
Sbjct: 151 IELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLREL 210
Query: 1132 VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSL 1311
V E + KD L+QL +A+Q+++S+F SM+ +L+EQNK IL RL++ + S +PPLFSS
Sbjct: 211 VNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSN 270
Query: 1312 QLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNND 1446
Q++E+EA+ SSL + A+ D V D +++ EN ND
Sbjct: 271 QIKEMEAMLSSLVTRANDKEKD-MLAMHGVNGKDSNIVTENAVND 314
>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|557541054|gb|ESR52098.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
Length = 1208
Score = 155 bits (393), Expect = 3e-35
Identities = 118/345 (34%), Positives = 168/345 (48%), Gaps = 19/345 (5%)
Frame = +1
Query: 469 DVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXARV 648
DVEEGEISD+ASVEEI+EE F KQ + ARV
Sbjct: 4 DVEEGEISDTASVEEISEEDFKIKQ-----------EEVVKVVKETKPIKVGGGEAAARV 52
Query: 649 WTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXX 825
WTMRDLY KY + GL+NLAWAQAV NKPL ++FVM +
Sbjct: 53 WTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDD------------- 99
Query: 826 XXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVEN---KDSNVEVKNEVG----GD 984
V VVE DS E++ E G G+
Sbjct: 100 ---------VSKRSSPASSVASVNSGAAAGKDDKKVVEKVVIDDSGDEIEKEEGELEEGE 150
Query: 985 VN-ELDERERSKRVNLIKEELESLNVADAQK----------SYDRLCSSLETTAVSLQKM 1131
+ +L+ K +KEE++ +NV ++ S++ +CS LE T SL+++
Sbjct: 151 IELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLREL 210
Query: 1132 VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSL 1311
V E + KD L+QL +A+Q+++S+F SM+ +L+EQNK IL RL++ + S +PPLFSS
Sbjct: 211 VNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSN 270
Query: 1312 QLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNND 1446
Q++E+EA+ SSL + A+ D V D +++ EN ND
Sbjct: 271 QIKEMEAMLSSLVTRANDKEKD-MLAMHGVNGKDSNIVTENAVND 314
>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|567892677|ref|XP_006438859.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
gi|557541053|gb|ESR52097.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
gi|557541055|gb|ESR52099.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
Length = 1118
Score = 155 bits (393), Expect = 3e-35
Identities = 118/345 (34%), Positives = 168/345 (48%), Gaps = 19/345 (5%)
Frame = +1
Query: 469 DVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXARV 648
DVEEGEISD+ASVEEI+EE F KQ + ARV
Sbjct: 4 DVEEGEISDTASVEEISEEDFKIKQ-----------EEVVKVVKETKPIKVGGGEAAARV 52
Query: 649 WTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXX 825
WTMRDLY KY + GL+NLAWAQAV NKPL ++FVM +
Sbjct: 53 WTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDD------------- 99
Query: 826 XXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVEN---KDSNVEVKNEVG----GD 984
V VVE DS E++ E G G+
Sbjct: 100 ---------VSKRSSPASSVASVNSGAAAGKDDKKVVEKVVIDDSGDEIEKEEGELEEGE 150
Query: 985 VN-ELDERERSKRVNLIKEELESLNVADAQK----------SYDRLCSSLETTAVSLQKM 1131
+ +L+ K +KEE++ +NV ++ S++ +CS LE T SL+++
Sbjct: 151 IELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLREL 210
Query: 1132 VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSL 1311
V E + KD L+QL +A+Q+++S+F SM+ +L+EQNK IL RL++ + S +PPLFSS
Sbjct: 211 VNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSN 270
Query: 1312 QLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNND 1446
Q++E+EA+ SSL + A+ D V D +++ EN ND
Sbjct: 271 QIKEMEAMLSSLVTRANDKEKD-MLAMHGVNGKDSNIVTENAVND 314
>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Vitis vinifera]
Length = 1238
Score = 154 bits (390), Expect = 7e-35
Identities = 118/339 (34%), Positives = 163/339 (48%), Gaps = 13/339 (3%)
Frame = +1
Query: 436 KEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXX 615
+++ + + + DVEEGEISDSASVEEI+EE F+ ++ +
Sbjct: 3 EKENNIMMGIEDVEEGEISDSASVEEISEEDFNKQEVRVLREAKPKADT----------- 51
Query: 616 XXXXXXXXARVWTMRDL---YKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTX 786
RVWTMRDL YKY A LYNLAWAQAV NKPL D+FVM ++++
Sbjct: 52 ---------RVWTMRDLQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESK 102
Query: 787 XXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVK 966
+I + DS +VK
Sbjct: 103 RSSSSSNTSRDDSSSAKEVAKVIIDDSGDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVK 162
Query: 967 NEVGG-DVNE----LDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKM 1131
+E G DVNE L ERE +RV I+E+LES+ V +A+KS+ +CS L+ T SLQK+
Sbjct: 163 DEGGVLDVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKV 222
Query: 1132 -----VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPP 1296
V E S KD L Q L+ AI+ L +F SM+ +E NK + RL++ V P
Sbjct: 223 FGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSP 282
Query: 1297 LFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTD 1413
+FS ++EVE + S L +PA S + S+ V TD
Sbjct: 283 IFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTD 321
>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum tuberosum]
Length = 1218
Score = 147 bits (372), Expect = 9e-33
Identities = 117/358 (32%), Positives = 165/358 (46%), Gaps = 24/358 (6%)
Frame = +1
Query: 463 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 642
V DVEEGEISDSASVEEI+E+AF+ +
Sbjct: 7 VEDVEEGEISDSASVEEISEDAFNRQDPPTTTKIKIASNENQNQNSTTT----------T 56
Query: 643 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 822
RVWTMRD YKY I S+ GLYNLAWAQAV NKPL ++FVM D++
Sbjct: 57 RVWTMRDAYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA--------- 106
Query: 823 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVN---- 990
N ++NVE K + DV+
Sbjct: 107 ---------------------------------------NANANVESKVIIDVDVDDDAK 127
Query: 991 ---ELDERERS-----------KRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQK 1128
EL+E E K N ++E+L+S+ + + KS+ +CS L+T+ ++L +
Sbjct: 128 EEGELEEGEIDLDAADLVLNFGKEANFVREQLQSVTLDETHKSFSMVCSKLQTSLLALGE 187
Query: 1129 MVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSS 1308
+ L S + D L+QL +TA++T+ S+F SM+ ++QN IL RL+ + P L SS
Sbjct: 188 LAL--SQDKNDILIQLFMTALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQLPALLSS 245
Query: 1309 LQLEEVEAIRSSLQSPA---DSLSNDNSNGRKQVGTTD---LHVLLENTNNDSACLTK 1464
QL+EV+A+ S+ A ++ ND NG K V D H EN N D + K
Sbjct: 246 EQLKEVDAVILSINQSAVFSNTQDNDKVNGIKVVELLDKKVSHKSSENANQDFTAVNK 303
>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
Length = 1184
Score = 147 bits (370), Expect = 2e-32
Identities = 118/333 (35%), Positives = 159/333 (47%), Gaps = 13/333 (3%)
Frame = +1
Query: 454 KVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXX 633
++ + DVEEGEISDSASVEEI+EE F+ ++ +
Sbjct: 49 RMGIEDVEEGEISDSASVEEISEEDFNKQEVRVLREAKPKADT----------------- 91
Query: 634 XXARVWTMRDL---YKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXX 804
RVWTMRDL YKY A LYNLAWAQAV NKPL D+FV++ DD+
Sbjct: 92 ---RVWTMRDLQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVII-DDSGDEMDVK 147
Query: 805 XXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGG- 981
+ + DS +VK+E G
Sbjct: 148 MDDVSEKEEGELEEGEI----------------------------DLDSEPDVKDEGGVL 179
Query: 982 DVNE----LDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKM-----V 1134
DVNE L ERE +RV I+E+LES+ V +A+KS+ +CS L+ T SLQK+ V
Sbjct: 180 DVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVV 239
Query: 1135 LEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQ 1314
E S KD L Q L+ AI+ L +F SM+ +E NK + RL++ V P+FS
Sbjct: 240 GESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQH 299
Query: 1315 LEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTD 1413
++EVE + S L +PA S + S+ V TD
Sbjct: 300 IKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTD 332
>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum lycopersicum]
Length = 1211
Score = 142 bits (359), Expect = 3e-31
Identities = 111/354 (31%), Positives = 161/354 (45%), Gaps = 20/354 (5%)
Frame = +1
Query: 463 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 642
V D EEGEISDSASVEEI+E+AF+ + +
Sbjct: 7 VEDAEEGEISDSASVEEISEDAFNRQDPPTT-------STTSKIKIASNENQNQNSTTAT 59
Query: 643 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 822
RVWTMRD+YKY I S+ GLYNLAWAQAV NKPL ++FVM D++
Sbjct: 60 RVWTMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA--------- 109
Query: 823 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNELDE 1002
N +S V + +V D E E
Sbjct: 110 ---------------------------------------NGESKVIIDVDVDDDAKEEGE 130
Query: 1003 RERS--------------KRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLE 1140
E K N I+E+L+S+ + + KS+ +CS L+T+ ++L ++ L
Sbjct: 131 LEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELAL- 189
Query: 1141 GSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLE 1320
S + D L+QL +TA++T+ S+F SM+ ++QN IL RL+ + P L SS QL+
Sbjct: 190 -SQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLK 248
Query: 1321 EVEAIRSSLQS---PADSLSNDNSNGRKQVGTTDL---HVLLENTNNDSACLTK 1464
E++A+ S+ +++ ND NG V D+ H EN N D + K
Sbjct: 249 ELDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNK 302
>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
Length = 1227
Score = 142 bits (359), Expect = 3e-31
Identities = 111/354 (31%), Positives = 161/354 (45%), Gaps = 20/354 (5%)
Frame = +1
Query: 463 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 642
V D EEGEISDSASVEEI+E+AF+ + +
Sbjct: 7 VEDAEEGEISDSASVEEISEDAFNRQDPPTT-------STTSKIKIASNENQNQNSTTAT 59
Query: 643 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 822
RVWTMRD+YKY I S+ GLYNLAWAQAV NKPL ++FVM D++
Sbjct: 60 RVWTMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA--------- 109
Query: 823 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNELDE 1002
N +S V + +V D E E
Sbjct: 110 ---------------------------------------NGESKVIIDVDVDDDAKEEGE 130
Query: 1003 RERS--------------KRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLE 1140
E K N I+E+L+S+ + + KS+ +CS L+T+ ++L ++ L
Sbjct: 131 LEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELAL- 189
Query: 1141 GSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLE 1320
S + D L+QL +TA++T+ S+F SM+ ++QN IL RL+ + P L SS QL+
Sbjct: 190 -SQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLK 248
Query: 1321 EVEAIRSSLQS---PADSLSNDNSNGRKQVGTTDL---HVLLENTNNDSACLTK 1464
E++A+ S+ +++ ND NG V D+ H EN N D + K
Sbjct: 249 ELDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNK 302
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 130 bits (328), Expect = 1e-27
Identities = 98/292 (33%), Positives = 142/292 (48%), Gaps = 3/292 (1%)
Frame = +1
Query: 460 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 639
++ DVEEGEISD+ASVEEI+E+ F+ ++ +
Sbjct: 16 KMEDVEEGEISDTASVEEISEDDFNKQEVVVVKETPSSTTNNNSSSKQ------------ 63
Query: 640 ARVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMME-DDTXXXXXXXXXXX 816
+VWT+RDLYKYQ+ SGLYNLAWAQAV NKPL ++FV +E DD+
Sbjct: 64 -KVWTVRDLYKYQVGGGYM-SGLYNLAWAQAVQNKPLNELFVEVEVDDSSQKSSVSSVNS 121
Query: 817 XXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNEL 996
VI E ++ +++ +E G +
Sbjct: 122 SKEDKRTV----VIDDSGDEMDVVKVIDIEKEEG------ELEEGEIDLDSE-GKSEGGM 170
Query: 997 DERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVL--EGSFSEKDTLV 1170
+ KRV I+E+LES++V KS++ +C L SL+++V E F KD+LV
Sbjct: 171 VSVDTEKRVKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLV 230
Query: 1171 QLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEV 1326
+LL TAI + S FSSM+ L+EQNK + +R ++ V S P FS +EV
Sbjct: 231 RLLFTAIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEV 282
>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
3 [Populus trichocarpa]
Length = 1190
Score = 127 bits (318), Expect = 2e-26
Identities = 95/291 (32%), Positives = 140/291 (48%), Gaps = 3/291 (1%)
Frame = +1
Query: 463 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 642
+ DVEEGEISD+ASVEEI+EE F+ ++ S
Sbjct: 15 IEDVEEGEISDTASVEEISEEDFNKQEVVIVKETPSSNNSSQ------------------ 56
Query: 643 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 822
+VWT+RDLYKYQ+ SGLYNLAWA+AV NKPL ++ V+++D
Sbjct: 57 KVWTVRDLYKYQVGGGYM-SGLYNLAWARAVQNKPLNELTVVIDDSGDEMD--------- 106
Query: 823 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDS-NVEVKNEVGGDVNELD 999
V+ VV+++ +V+V+N
Sbjct: 107 ----------VVKVIDIEKEEGELEEGEIDLDSEPVVVQSEGMVSVDVEN---------- 146
Query: 1000 ERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMV--LEGSFSEKDTLVQ 1173
RV I+++LES++V + +KS++ +C L SL+++V + SF KD LVQ
Sbjct: 147 ------RVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQ 200
Query: 1174 LLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEV 1326
LL AI+ + S+F SM+ L+EQNK + R + + S PP FS Q +EV
Sbjct: 201 LLFMAIRVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEV 251
>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Fragaria vesca subsp. vesca]
Length = 1230
Score = 115 bits (287), Expect = 6e-23
Identities = 94/309 (30%), Positives = 140/309 (45%), Gaps = 10/309 (3%)
Frame = +1
Query: 460 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 639
EV DVEEGEI DS SVEEI+EE F ++
Sbjct: 9 EVVDVEEGEIPDSNSVEEISEEDFVKQESKAVEPKSNGGSGDG----------------- 51
Query: 640 ARVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXX 819
AR WT ++ + GL NLAWAQAV NKP D+ V ++ D
Sbjct: 52 ARFWTFHEVLAHPHFRGIGGGGLANLAWAQAVQNKPFNDLLVKLDSDEKSKQQQQQRSSV 111
Query: 820 XXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNELD 999
VI VE ++ +E + E+G D +E
Sbjct: 112 SSGNEKV----VIIDSGDEMD-----------------VEKEEEELE-EGEIGFD-SECG 148
Query: 1000 ERERS----------KRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLEGSF 1149
+ +++ KRVNL++E LESL + +A+KS+ +C + SL+ ++ E +
Sbjct: 149 DNDKAAGSVGNGVWEKRVNLLREALESLTITEAEKSFGDVCHRFLDSLESLRGVLSEINV 208
Query: 1150 SEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVE 1329
S K+ LVQ L A++ + S+F SMS +EQNK +L R+++ S P F + QL+E+E
Sbjct: 209 STKEALVQQLFNAVRAISSVFRSMSADQKEQNKDVLSRILSSAKS-DPSPFPAEQLKEIE 267
Query: 1330 AIRSSLQSP 1356
+ SS+ SP
Sbjct: 268 VMSSSMDSP 276
>ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Glycine max]
Length = 1261
Score = 114 bits (286), Expect = 8e-23
Identities = 95/330 (28%), Positives = 146/330 (44%), Gaps = 11/330 (3%)
Frame = +1
Query: 460 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 639
E DVEEGEISD+ASVEEI+ E F+ + S
Sbjct: 21 EAEDVEEGEISDTASVEEISAEDFNKQDVKLLNNNNKPNGSD------------------ 62
Query: 640 ARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXX 816
ARVW + DLY KY + SGLYNLAWAQAV NKPL D+FVM D
Sbjct: 63 ARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNRNSSH 122
Query: 817 XXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNEL 996
V+ D++ E + E V +
Sbjct: 123 RLASVAVNPKDVVVVDVDKEEGELEEGEI--------------DADAEPEGEAESVVVAV 168
Query: 997 DERERSKRVNLIKEE---------LESLNVADAQKSYDRLCSSLETTAVSLQKMVLEGSF 1149
+ E+ V + + LE + VA+ +S+ + CS L+ T L +++ +
Sbjct: 169 SDSEKLDDVKMDVSDSEQLGARGVLEGVTVANVVESFAQTCSKLQNT---LPEVLSRPAG 225
Query: 1150 SEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARV-TSLKPPLFSSLQLEEV 1326
SEKD LV+L A + +YS+F SM +EQNK +LRL++ V + LFS ++E+
Sbjct: 226 SEKDDLVRLSFNATEVVYSVFCSMDSSEKEQNKDSILRLLSFVKDQQQAQLFSPEHVKEI 285
Query: 1327 EAIRSSLQSPADSLSNDNSNGRKQVGTTDL 1416
+ + +++ S ++++ K++ TT++
Sbjct: 286 QGMMTAIDSVGALVNSEAIGKEKELQTTEI 315
>ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Glycine max]
Length = 1257
Score = 113 bits (282), Expect = 2e-22
Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 5/339 (1%)
Frame = +1
Query: 409 AFLNMEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXX 588
+ L+ E+ K +++ K EV DVEEGEISD+ASVEEI+ E F+ + S
Sbjct: 5 SLLDCEKLGKLEKMGK-EVEDVEEGEISDTASVEEISAEDFNKQDVKVLNNNNKPNGSD- 62
Query: 589 XXXXXXXXXXXXXXXXXARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFV 765
ARVW + DLY KY + SGLYNLAWAQAV NKPL D+FV
Sbjct: 63 -----------------ARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFV 105
Query: 766 MMEDDTXXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENK 945
M D V+ E +
Sbjct: 106 MEVDSDANANSNSNNSNRLASVAVNPKDVVVVDVDKEEGELEEGEIDADAEP-----EGE 160
Query: 946 DSNVEVKNEVGGDVNELDE--RERSKRVNL-IKEELESLNVADAQKSYDRLCSSLETTAV 1116
+V V V D +LD+ R+ S L ++ LE + VA+ +S+ + CS L+
Sbjct: 161 AESV-VAVPVVSDSEKLDDVKRDVSNSEQLGVRGVLEGVTVANVAESFAQTCSKLQN--- 216
Query: 1117 SLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARV-TSLKP 1293
+L +++ + SE+D LV+L A + +YS+F SM + +EQNK +LRL++ V +
Sbjct: 217 ALPEVLSRPADSERDDLVRLSFNATEVVYSVFCSMDSLKKEQNKDSILRLLSFVKDQQQA 276
Query: 1294 PLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTT 1410
LFS ++E++ + +++ ++++ K++ TT
Sbjct: 277 QLFSPEHIKEIQGMMTAIDYFGALVNSEAIGKEKELQTT 315
>ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X1 [Cicer arietinum]
Length = 1247
Score = 110 bits (276), Expect = 1e-21
Identities = 99/334 (29%), Positives = 155/334 (46%), Gaps = 5/334 (1%)
Frame = +1
Query: 409 AFLNMEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXX 588
+FL+ E + + K EV DVEEGEISD+ASV EI+EE F+ + K+
Sbjct: 5 SFLDCENSKNFEGMGK-EVEDVEEGEISDTASVVEISEEDFNKQDVVKVNNNSDSDKAKT 63
Query: 589 XXXXXXXXXXXXXXXXXARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFV 765
ARVW + DLY KY + SGLYNLAWAQAV NKPL D+FV
Sbjct: 64 GGD--------------ARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFV 109
Query: 766 M-MEDDTXXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVEN 942
M ++ D+ V+ E
Sbjct: 110 MELDSDSNANANSNNDSNNGNGDLNMPLKEVVMVDDDEREEG----------------EL 153
Query: 943 KDSNVEVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSL 1122
++ ++ ++ GG + D E + I++ LE + VA+ +S+ S L L
Sbjct: 154 EEGEIDGDDDTGGVMVGGDGSETVSESD-IRDFLEGVTVANVAESFAETISRLLRV---L 209
Query: 1123 QKMVLEG-SFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPL 1299
Q +L G + SEKD +++LL AI+ ++S+F SM + +E NK ++RL+ + + L
Sbjct: 210 QSKLLSGPAVSEKDYVIRLLYNAIEIVHSVFCSMDNLQKEDNKDNIIRLLYFLKNEHTQL 269
Query: 1300 FSSLQLEEVEAIRSSLQSPADSLSND--NSNGRK 1395
FS ++E++ + +++ + D+L N NG K
Sbjct: 270 FSPEHMKEIQVMITAIDT-VDALGNSVVVGNGEK 302
>ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X2 [Cicer arietinum]
Length = 1227
Score = 108 bits (270), Expect = 6e-21
Identities = 98/333 (29%), Positives = 150/333 (45%), Gaps = 4/333 (1%)
Frame = +1
Query: 409 AFLNMEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXX 588
+FL+ E + + K EV DVEEGEISD+ASV EI+EE F+ + K+
Sbjct: 5 SFLDCENSKNFEGMGK-EVEDVEEGEISDTASVVEISEEDFNKQDVVKVNNNSDSDKAKT 63
Query: 589 XXXXXXXXXXXXXXXXXARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFV 765
ARVW + DLY KY + SGLYNLAWAQAV NKPL D+FV
Sbjct: 64 GGD--------------ARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFV 109
Query: 766 MMEDDTXXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENK 945
M D E +
Sbjct: 110 MELDSDSNANVVMVDDDEREEG-----------------------------------ELE 134
Query: 946 DSNVEVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQ 1125
+ ++ ++ GG + D E + I++ LE + VA+ +S+ S L LQ
Sbjct: 135 EGEIDGDDDTGGVMVGGDGSETVSESD-IRDFLEGVTVANVAESFAETISRLLRV---LQ 190
Query: 1126 KMVLEG-SFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLF 1302
+L G + SEKD +++LL AI+ ++S+F SM + +E NK ++RL+ + + LF
Sbjct: 191 SKLLSGPAVSEKDYVIRLLYNAIEIVHSVFCSMDNLQKEDNKDNIIRLLYFLKNEHTQLF 250
Query: 1303 SSLQLEEVEAIRSSLQSPADSLSND--NSNGRK 1395
S ++E++ + +++ + D+L N NG K
Sbjct: 251 SPEHMKEIQVMITAIDT-VDALGNSVVVGNGEK 282
>ref|XP_003621644.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula] gi|355496659|gb|AES77862.1| RNA
polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
Length = 1213
Score = 105 bits (263), Expect = 4e-20
Identities = 87/278 (31%), Positives = 122/278 (43%), Gaps = 7/278 (2%)
Frame = +1
Query: 460 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 639
EV DVEEGEISDSAS+EEITEE F K+ K+
Sbjct: 21 EVEDVEEGEISDSASLEEITEEDF--KKGDDVKVNNSDVKTDKSDNKVKTGGGGGGGGD- 77
Query: 640 ARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXX 816
+RVW ++DLY KY + SGLYNLAWAQAV NKPL D+FVM D
Sbjct: 78 SRVWAVQDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDKNANANSNNSGNK 137
Query: 817 XXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNE- 993
V+ + K+ + E+ GD ++
Sbjct: 138 DGELNKSSKEIVVVDDD-----------------------DEKEEGELEEGEIDGDADDD 174
Query: 994 ----LDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLEG-SFSEK 1158
E + V ++ LE + VA +S+ C ++ T LQ V G +EK
Sbjct: 175 CVIVGSENFSNSEVLGVRGVLEGVTVASVAESFAETCRRIQGT---LQSKVFSGFDSAEK 231
Query: 1159 DTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVA 1272
D LV+LL A++ +YS+F M + +E+NK + RL++
Sbjct: 232 DDLVRLLFNAVEVVYSVFCCMDNLQKEENKDNISRLLS 269
>gb|ESW11309.1| hypothetical protein PHAVU_008G019000g [Phaseolus vulgaris]
Length = 1272
Score = 105 bits (262), Expect = 5e-20
Identities = 91/313 (29%), Positives = 140/313 (44%), Gaps = 7/313 (2%)
Frame = +1
Query: 460 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 639
EV DVEEGEISD+ASVEEI+E F+ +
Sbjct: 21 EVEDVEEGEISDTASVEEISEADFNKQDVKVNNNNKPNGSD------------------- 61
Query: 640 ARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXX 816
ARVW++RD+Y KY + SGLYNLAWAQAV NKPL D+FVM D
Sbjct: 62 ARVWSVRDIYTKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSEANANSNSNNSN 121
Query: 817 XXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNEL 996
++ E + +V + V V++
Sbjct: 122 RPSSVSVNPKEVMVVDVDREEGELEEGEIDADADP-----EAEAESVVAASVVSETVSDS 176
Query: 997 DERERSKRVN-----LIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLEGSFSEKD 1161
++ K V+ +++ LE + VA+ +S+ + S L +L ++ + SEKD
Sbjct: 177 EQFGVKKGVSDSEQLGVRDVLEGVTVANVAESFAQTSSRLLN---ALPQVFSRPADSEKD 233
Query: 1162 TLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLK-PPLFSSLQLEEVEAIR 1338
L++L AI+ +YS+F SM +EQNK +LRL++ K LFS ++E++ +
Sbjct: 234 DLIRLSFNAIEVVYSVFRSMDSSDKEQNKNSILRLLSSAKDKKQAQLFSPEHIKEIQDMM 293
Query: 1339 SSLQSPADSLSND 1377
+++ S SN+
Sbjct: 294 TAIDSVGALGSNE 306
>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
notabilis]
Length = 1301
Score = 95.5 bits (236), Expect = 5e-17
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
Frame = +1
Query: 946 DSNVEVKNEVGGDVNELDER--ERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVS 1119
D N E +N VGG E+D R E KRV+LI E L S+NV +A+KS++ +CS L+ T S
Sbjct: 180 DLNCEAEN-VGG--LEVDSRRDELEKRVDLIWETLGSVNVVNAEKSFEEVCSRLQRTLES 236
Query: 1120 LQKMVLEGSFS--EKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKP 1293
L+ ++ E FS KD ++Q+ +TAIQ + S+F SMS+ +EQ K L RL V +
Sbjct: 237 LRGVLSEKEFSFPTKDVVIQMSITAIQVVNSVFCSMSVNQKEQKKETLSRLFCSVKNCGT 296
Query: 1294 PLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTD-LHVL---LENTNNDSACLT 1461
PLFS Q +E+E + SSL S+ S+ K+ + LH + L N N ++A +
Sbjct: 297 PLFSPEQTKEIELMISSLNPLNVLPSSGASDKEKETQIIERLHEMDSNLTNANAENASIE 356
Query: 1462 KCGIE 1476
+ ++
Sbjct: 357 RTSVK 361
Score = 82.0 bits (201), Expect = 6e-13
Identities = 49/105 (46%), Positives = 58/105 (55%)
Frame = +1
Query: 463 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 642
V DVEEGEISDSASVEEI+EE F+ ++ S +
Sbjct: 10 VEDVEEGEISDSASVEEISEEDFNKQEGNGTGSGKVMSVSDSNSKESKFGD--------S 61
Query: 643 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMED 777
RVWTMRDLY + +GLYNLAWAQAV NKPL ++FVM D
Sbjct: 62 RVWTMRDLYANYPGFRGYTTGLYNLAWAQAVQNKPLNEIFVMDVD 106
>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao]
Length = 1290
Score = 89.7 bits (221), Expect = 3e-15
Identities = 92/334 (27%), Positives = 133/334 (39%), Gaps = 16/334 (4%)
Frame = +1
Query: 424 EEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXX 603
EE E + +V DVEEGEISDSAS+EEI+EE F+ KQ K
Sbjct: 18 EETLGEMGKDETKVEDVEEGEISDSASIEEISEEDFN-KQDVKILKESKSSKGGEANSN- 75
Query: 604 XXXXXXXXXXXXARVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDT 783
+RVWTM+DL KY + SGLYN AWAQAV NKPL ++FV +
Sbjct: 76 ------------SRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNEIFVKDFEQP 123
Query: 784 XXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEV 963
V + E+K N++
Sbjct: 124 QQDENKNSKRSSPSSSVAS----VNSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNLD- 178
Query: 964 KNEVGGDVNELDERERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLEG 1143
K E + E+D K L E+ N + +K + + LE V + EG
Sbjct: 179 KEEGELEEGEIDLDSEPKEKVLSSEDGNVGNSDELEKRANLIRGVLEGVTVIEAEKSFEG 238
Query: 1144 SFSEKDTLVQLLLTAI----------------QTLYSMFSSMSLILQEQNKAILLRLVAR 1275
S ++ L I + S F +++ +EQN AIL RL++
Sbjct: 239 VCSRLHNALESLRALILECSVPAKDALIQLAFGAINSAFVALNCNSKEQNVAILSRLLSI 298
Query: 1276 VTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSND 1377
V P LF +++E++ + SL SPA ++ +
Sbjct: 299 VKGHDPSLFPPDKMKEIDVMLISLNSPARAIDTE 332
>ref|NP_180912.2| RNA polymerase II C-terminal domain phosphatase-like 3 [Arabidopsis
thaliana] gi|238055326|sp|Q8LL04.2|CPL3_ARATH RecName:
Full=RNA polymerase II C-terminal domain phosphatase-like
3; Short=FCP-like 3; AltName: Full=Carboxyl-terminal
phosphatase-like 3; Short=AtCPL3; Short=CTD
phosphatase-like 3 gi|330253756|gb|AEC08850.1| RNA
polymerase II C-terminal domain phosphatase-like 3
[Arabidopsis thaliana]
Length = 1241
Score = 89.7 bits (221), Expect = 3e-15
Identities = 88/344 (25%), Positives = 142/344 (41%), Gaps = 3/344 (0%)
Frame = +1
Query: 469 DVEEGEISDSASVE-EITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXAR 645
DVEEGEI DS + E E+ ++ +T +R
Sbjct: 26 DVEEGEIPDSVNTEIEVKHKSTTTTADVGGDVDVGVVAGGRGGGGGGSNGN-------SR 78
Query: 646 VWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 822
VWTM +L +Y + SGL NLAWA+AV NKP + VM +
Sbjct: 79 VWTMEELISQYPAYRPYANSGLSNLAWARAVQNKPFNEGLVMDYEPRESDKIVIEDSDDE 138
Query: 823 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNELDE 1002
+ V ++ +S V + + D L E
Sbjct: 139 KEEGELEEGEI--------------DLVDNASDDNLVEKDTESVVLISADKVEDDRILKE 184
Query: 1003 RERSKRVNLIKEELESLNVADAQKSYDRLCSSLETTAVSLQKMVLEGS-FSEKDTLVQLL 1179
R+ K+V LI+ LES ++ +AQ ++ +CS + SL+++V + F ++DTLVQL
Sbjct: 185 RDLEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGALESLRELVSDNDDFPKRDTLVQLS 244
Query: 1180 LTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPA 1359
++QT+ +F SM+ I +E+NK + RL+ V S Q E+E + L A
Sbjct: 245 FASLQTINYVFCSMNNISKERNKETMSRLLTLVNDHFSQFLSFNQKNEIETMNQDLSRSA 304
Query: 1360 DSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAG 1491
++ S+ +++ + + +N DS K ES G
Sbjct: 305 IAVFAGTSS------EENVNQMTQPSNGDSFLAKKLTSESTHRG 342