BLASTX nr result
ID: Rehmannia24_contig00015230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00015230
(1357 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004237420.1| PREDICTED: general transcription factor IIH ... 602 e-169
ref|XP_006363938.1| PREDICTED: general transcription factor IIH ... 600 e-169
ref|XP_006366483.1| PREDICTED: general transcription factor IIH ... 587 e-165
emb|CBI16283.3| unnamed protein product [Vitis vinifera] 576 e-162
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ... 576 e-162
gb|EOY33067.1| General transcription factor II H2 isoform 1 [The... 568 e-159
gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus... 568 e-159
gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus pe... 565 e-158
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ... 565 e-158
ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor ... 562 e-157
ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citr... 558 e-156
ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citr... 556 e-156
ref|XP_006489788.1| PREDICTED: general transcription factor IIH ... 556 e-156
ref|XP_004493385.1| PREDICTED: general transcription factor IIH ... 556 e-156
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ... 555 e-155
ref|XP_006491820.1| PREDICTED: general transcription factor IIH ... 554 e-155
gb|EPS68872.1| hypothetical protein M569_05896, partial [Genlise... 551 e-154
ref|XP_003624959.1| General transcription factor IIH subunit [Me... 550 e-154
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ... 549 e-154
ref|NP_683275.2| transcription initiation factor TFIIH subunit H... 541 e-151
>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
lycopersicum]
Length = 414
Score = 602 bits (1551), Expect = e-169
Identities = 293/360 (81%), Positives = 310/360 (86%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFIREF 1178
L HAQYRRRLRT++AARIQKGLIRYLYI+ID SRAA EMDYKPSRMVVVARQ EA+IREF
Sbjct: 54 LSHAQYRRRLRTATAARIQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVARQVEAYIREF 113
Query: 1177 FDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHSLLN 998
FDQNPLSQIGLV LKDGVAHCLTDLGGSPE+HIKALMGKL +SGDASLQNGLDLV LLN
Sbjct: 114 FDQNPLSQIGLVILKDGVAHCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLN 173
Query: 997 QIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGG 818
QIP+YGHRE LILYSALSTCDPGDI+ETIQKCKASKIRCSVIGLSAELYICK+LCQETGG
Sbjct: 174 QIPSYGHREALILYSALSTCDPGDILETIQKCKASKIRCSVIGLSAELYICKHLCQETGG 233
Query: 817 SYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEAKVGG 638
Y+VALDE HLKELV ANLI+MGFPQR AEGVISICSCHKEAKVGG
Sbjct: 234 MYFVALDEPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRTAEGVISICSCHKEAKVGG 293
Query: 637 GYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPRYLPK 458
GYTCPRCKARICELPTEC ICGLTLVSSPHLARSYHHLFPI PF LPK
Sbjct: 294 GYTCPRCKARICELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSALKDFHKLPK 353
Query: 457 NCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVGTVE 278
NCFGCQ SLLNPGN+P V+CP CKQ+FCLDCDIYIHESLHNCPGCES R+SKT+ +E
Sbjct: 354 NCFGCQLSLLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTISDME 413
>ref|XP_006363938.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
[Solanum tuberosum]
Length = 414
Score = 600 bits (1547), Expect = e-169
Identities = 294/360 (81%), Positives = 310/360 (86%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFIREF 1178
L HAQYRRRLRT++AARIQKGLIRYLYI+IDLSRAA EMDYKPSRMVVVARQ EAFIREF
Sbjct: 54 LSHAQYRRRLRTATAARIQKGLIRYLYIIIDLSRAAAEMDYKPSRMVVVARQVEAFIREF 113
Query: 1177 FDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHSLLN 998
FDQNPLSQIGLV LKDGVAHCLTDLGGSPE+HIKALMGKL +SGDASLQNGLDLV LLN
Sbjct: 114 FDQNPLSQIGLVILKDGVAHCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLN 173
Query: 997 QIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGG 818
QIP+YGHRE LILYSALSTCDPGDI+ETIQK KASKIRCSVIGLSAELYICK+LCQETGG
Sbjct: 174 QIPSYGHREALILYSALSTCDPGDILETIQKYKASKIRCSVIGLSAELYICKHLCQETGG 233
Query: 817 SYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEAKVGG 638
Y+VALDE HLKELV ANLI+MGFPQR AEGVISICSCHKEAKVGG
Sbjct: 234 MYFVALDEPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRTAEGVISICSCHKEAKVGG 293
Query: 637 GYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPRYLPK 458
GYTCPRCKARICELPTEC ICGLTLVSSPHLARSYHHLFPI PF LPK
Sbjct: 294 GYTCPRCKARICELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSALKDFHKLPK 353
Query: 457 NCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVGTVE 278
NCFGCQ SLLNPGN+P V+CP CKQ+FCLDCDIYIHESLHNCPGCES R+SKT+ +E
Sbjct: 354 NCFGCQLSLLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTISDME 413
>ref|XP_006366483.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
tuberosum]
Length = 418
Score = 587 bits (1512), Expect = e-165
Identities = 290/364 (79%), Positives = 306/364 (84%), Gaps = 4/364 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFIREF 1178
L HAQYRRRLRT++AARIQKGLIRYLYI+ID SRAA EMDYKPSRMVVVARQ EAFIREF
Sbjct: 54 LSHAQYRRRLRTATAARIQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVARQVEAFIREF 113
Query: 1177 FDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHSLLN 998
FDQNPLSQIGLV LKDG AHCLTDLGGSPE+HIK LMGKL +SGDASLQNGLDLV LLN
Sbjct: 114 FDQNPLSQIGLVILKDGEAHCLTDLGGSPEAHIKELMGKLGTSGDASLQNGLDLVCDLLN 173
Query: 997 QIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGG 818
QIP+YGHRE LILYSALSTCDPGDI+ETIQK KASKIRCSVIGLSAELYICK+LCQETGG
Sbjct: 174 QIPSYGHREALILYSALSTCDPGDILETIQKYKASKIRCSVIGLSAELYICKHLCQETGG 233
Query: 817 SYYVALDESHLKELVXXXXXXXXXXXXXXXANLIR----MGFPQRAAEGVISICSCHKEA 650
Y+VALDE HLKELV ANLI+ MGFPQR AEGVISICSCHKEA
Sbjct: 234 MYFVALDEPHLKELVLEHAPPPPAIAEFAVANLIQMGVTMGFPQRTAEGVISICSCHKEA 293
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
KVGGGYTCPRCKARICELPTEC ICGLTLVSSPHLARSYHHLFPI PF
Sbjct: 294 KVGGGYTCPRCKARICELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSTLKDFH 353
Query: 469 YLPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTV 290
LPKNCFGCQ S LNPGN+P V+CP CKQ+FCLDCDIYIHESLHNCPGCES R+SKT+
Sbjct: 354 KLPKNCFGCQLSFLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTI 413
Query: 289 GTVE 278
+E
Sbjct: 414 SDME 417
>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 576 bits (1485), Expect = e-162
Identities = 279/365 (76%), Positives = 307/365 (84%), Gaps = 5/365 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLRT----SSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
+YHAQYRRR+R+ ++ ARIQKGLIRYLYIV+DLSRAA EMD+KPSRM VVA+ EAF
Sbjct: 129 IYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAF 188
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
IREFFDQNPLSQIGLVT+KDG+A CLTDLGGSP+SH+KALMGKL SGD+SLQN LDLVH
Sbjct: 189 IREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVH 248
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LNQIP+YGHREVLILYSALSTCDPGDIMETIQ+CK SKIRCSVIGLSAE++IC++LCQ
Sbjct: 249 GYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQ 308
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGGSY VALDESH KEL+ ANLI+MGFPQRAAEGVISICSCHKEA
Sbjct: 309 ETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEA 368
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPF-XXXXXXXXXXP 473
KVGGGYTCPRCKAR+CELPTEC+ICGLTLVSSPHLARSYHHLFPI PF
Sbjct: 369 KVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPH 428
Query: 472 RYLPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKT 293
+ + CFGCQ+SLL PGN P CV+CPKCKQ+FCLDCDIYIHESLHNCPGCESFRHSK
Sbjct: 429 QRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKI 488
Query: 292 VGTVE 278
V E
Sbjct: 489 VSVTE 493
>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
vinifera]
Length = 433
Score = 576 bits (1485), Expect = e-162
Identities = 279/365 (76%), Positives = 307/365 (84%), Gaps = 5/365 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLRT----SSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
+YHAQYRRR+R+ ++ ARIQKGLIRYLYIV+DLSRAA EMD+KPSRM VVA+ EAF
Sbjct: 68 IYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAF 127
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
IREFFDQNPLSQIGLVT+KDG+A CLTDLGGSP+SH+KALMGKL SGD+SLQN LDLVH
Sbjct: 128 IREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVH 187
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LNQIP+YGHREVLILYSALSTCDPGDIMETIQ+CK SKIRCSVIGLSAE++IC++LCQ
Sbjct: 188 GYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQ 247
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGGSY VALDESH KEL+ ANLI+MGFPQRAAEGVISICSCHKEA
Sbjct: 248 ETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEA 307
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPF-XXXXXXXXXXP 473
KVGGGYTCPRCKAR+CELPTEC+ICGLTLVSSPHLARSYHHLFPI PF
Sbjct: 308 KVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPH 367
Query: 472 RYLPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKT 293
+ + CFGCQ+SLL PGN P CV+CPKCKQ+FCLDCDIYIHESLHNCPGCESFRHSK
Sbjct: 368 QRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKI 427
Query: 292 VGTVE 278
V E
Sbjct: 428 VSVTE 432
>gb|EOY33067.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
gi|508785812|gb|EOY33068.1| General transcription factor
II H2 isoform 1 [Theobroma cacao]
gi|508785813|gb|EOY33069.1| General transcription factor
II H2 isoform 1 [Theobroma cacao]
Length = 420
Score = 568 bits (1464), Expect = e-159
Identities = 276/359 (76%), Positives = 303/359 (84%), Gaps = 5/359 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLR----TSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
LYH+QYRRRLR T++AARIQKGLIRYLY+VIDLSRAA E D++PSR+VV+A+ EAF
Sbjct: 58 LYHSQYRRRLRSLSSTATAARIQKGLIRYLYLVIDLSRAASETDFRPSRIVVIAKHVEAF 117
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
IREFFDQNPLSQ+GL+T+KDGVA CLTDLGGSPESHIKALM KL SGD+SLQN LDLV
Sbjct: 118 IREFFDQNPLSQVGLLTIKDGVAQCLTDLGGSPESHIKALMNKLECSGDSSLQNALDLVD 177
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LNQIP+YGHREVLILY+ALSTCDPGDIMETIQKCK SKIRCSVIGL+AE++ICK+LCQ
Sbjct: 178 GYLNQIPSYGHREVLILYAALSTCDPGDIMETIQKCKKSKIRCSVIGLAAEMFICKHLCQ 237
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGG+Y VALDESH KEL+ ANLI+MGFPQRAAEG ISICSCHKEA
Sbjct: 238 ETGGTYSVALDESHFKELILEHAPPPPAIAEFATANLIKMGFPQRAAEGSISICSCHKEA 297
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
KVG GYTCPRCKAR+CELPTEC+ICGLTLVSSPHLARSYHHLFPI PF P
Sbjct: 298 KVGAGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVPPFSLNDPN 357
Query: 469 Y-LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSK 296
+ L +NCFGCQQSLLNPGN P V CPKCK YFCLDCDIYIHESLHNCPGC+SFRHSK
Sbjct: 358 HKLQRNCFGCQQSLLNPGNKPGLLVVCPKCKGYFCLDCDIYIHESLHNCPGCDSFRHSK 416
>gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus notabilis]
Length = 423
Score = 568 bits (1463), Expect = e-159
Identities = 274/360 (76%), Positives = 298/360 (82%), Gaps = 1/360 (0%)
Frame = -1
Query: 1354 YHAQYRRRLRTSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFIREFF 1175
YHAQYRRRLR++SA RIQKGLIRYL++VIDLS+AA EMD++PSRM VVA+ EAFIREFF
Sbjct: 63 YHAQYRRRLRSASAVRIQKGLIRYLFLVIDLSKAAAEMDFRPSRMAVVAKHVEAFIREFF 122
Query: 1174 DQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHSLLNQ 995
DQNPLSQ+GLVT+KDGVAHCLTDLGGSPESH+K+LMGKL SG++S+QN LDLVH LNQ
Sbjct: 123 DQNPLSQVGLVTIKDGVAHCLTDLGGSPESHVKSLMGKLECSGESSIQNALDLVHDYLNQ 182
Query: 994 IPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGGS 815
IP+YGHREVLI YSALSTCDPGDIMETIQKCK SKIRCSVIGLSAE++ICK+LCQETGGS
Sbjct: 183 IPSYGHREVLIFYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGS 242
Query: 814 YYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEAKVGGG 635
Y VALDESH KEL+ ANLI+MGFPQRAAE I+ICSCHKEAK GGG
Sbjct: 243 YSVALDESHFKELILEHAPPPPAIAEYAIANLIKMGFPQRAAESSIAICSCHKEAKAGGG 302
Query: 634 YTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPF-XXXXXXXXXXPRYLPK 458
YTCPRCKAR+CELPTECQ CGLTL+SSPHLARSYHHLFPI PF R L K
Sbjct: 303 YTCPRCKARVCELPTECQTCGLTLISSPHLARSYHHLFPIVPFDEMSTSLLSDPHRKLSK 362
Query: 457 NCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVGTVE 278
CFGCQQSLL GN P VSCPKCK FCLDCDIYIHESLHNCPGCES RHSK V E
Sbjct: 363 ACFGCQQSLLGFGNKPGPRVSCPKCKHQFCLDCDIYIHESLHNCPGCESARHSKPVAMSE 422
>gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
Length = 420
Score = 565 bits (1456), Expect = e-158
Identities = 271/362 (74%), Positives = 301/362 (83%), Gaps = 1/362 (0%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFIREF 1178
L HAQYRRRLR +S ARIQKGLIRY+YIVIDLS+AA EMD++PSRM VVA+ EAFI EF
Sbjct: 59 LKHAQYRRRLRAASTARIQKGLIRYVYIVIDLSKAAAEMDFRPSRMGVVAKHVEAFIIEF 118
Query: 1177 FDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHSLLN 998
F QNPLSQ+GLVT+KDGVAHCLTDLGGSP SH+KALMGKL SGD+SLQN LDLVH L
Sbjct: 119 FYQNPLSQVGLVTIKDGVAHCLTDLGGSPNSHVKALMGKLECSGDSSLQNALDLVHGYLE 178
Query: 997 QIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGG 818
QIP+YGHREVLILYSALSTCDPGDIMETIQKCK SKIRCSVIGLSAE++ICK+LCQETGG
Sbjct: 179 QIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQETGG 238
Query: 817 SYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEAKVGG 638
YY+ALDE HLKEL+ ANLI+MGFPQRAAEG ++ICSCHKEAKVGG
Sbjct: 239 LYYIALDEPHLKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVAICSCHKEAKVGG 298
Query: 637 GYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR-YLP 461
GYTCPRCKAR+C+LPTEC+ICGLTL+SSPHLARSYHHLFPI PF + P
Sbjct: 299 GYTCPRCKARVCDLPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSLLIDQQNKFP 358
Query: 460 KNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVGTV 281
+ CFGCQQSLLNPGN P+ V+CPKCKQ+FCLDCDIYIH+SLHNCPGCES HSK
Sbjct: 359 RACFGCQQSLLNPGNKPSLRVACPKCKQHFCLDCDIYIHDSLHNCPGCESASHSKIPNAN 418
Query: 280 EG 275
+G
Sbjct: 419 KG 420
>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
sativus]
Length = 423
Score = 565 bits (1455), Expect = e-158
Identities = 273/361 (75%), Positives = 306/361 (84%), Gaps = 7/361 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSA----ARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
+YHAQYRRRLRT S+ ARIQKGLIRYLYIVID S+AA EMD++PSRM VVA+ +AF
Sbjct: 57 IYHAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAF 116
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
+REFFDQNPLSQIGLVT+KDG A+CLTDLGGSPESH+KALMGKL SGDASLQNGL+LVH
Sbjct: 117 VREFFDQNPLSQIGLVTIKDGFANCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVH 176
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
S LNQIP+YGHREVL+LYSAL++CDPGDIMET+QKCK SKIRCSVIGL+AE++IC++LCQ
Sbjct: 177 SYLNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQ 236
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGGSY VALDESH KEL+ NLI+MGFPQRAAE I+ICSCHKEA
Sbjct: 237 ETGGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEA 296
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
KVGGGYTCPRCKAR+CELPTEC+ICGLTL+SSPHLARSYHHLFPI PF PR
Sbjct: 297 KVGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPR 356
Query: 469 Y-LPKNCFGCQQSLLNP--GNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHS 299
+ LPK CFGCQ+SL+NP GN P+ VSCPKCKQ+FCLDCDIYIHESLHNCPGCESFR
Sbjct: 357 HQLPKVCFGCQESLMNPSTGNSPSIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRRP 416
Query: 298 K 296
K
Sbjct: 417 K 417
>ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor complex p47 subunit-like
[Fragaria vesca subsp. vesca]
Length = 420
Score = 562 bits (1449), Expect = e-157
Identities = 270/362 (74%), Positives = 302/362 (83%), Gaps = 1/362 (0%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFIREF 1178
L+HAQYRRRLR ++ ARIQKGLIRYLYIVIDLS+AA EMD++PSRM VVA+ EAFIRE+
Sbjct: 58 LHHAQYRRRLRAATTARIQKGLIRYLYIVIDLSKAASEMDFRPSRMGVVAKHVEAFIREY 117
Query: 1177 FDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHSLLN 998
F QNPLSQ+GLVT+KDGV+H LTDLGGSPESH+KALMGKL SGDASLQN LDLV L+
Sbjct: 118 FYQNPLSQVGLVTIKDGVSHILTDLGGSPESHVKALMGKLECSGDASLQNALDLVQGYLD 177
Query: 997 QIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGG 818
QIP+YGHREVLI+YSALSTCDPGDIM TIQKCK SKIRCSVIGLSAE++ICK+LCQETGG
Sbjct: 178 QIPSYGHREVLIMYSALSTCDPGDIMGTIQKCKKSKIRCSVIGLSAEIFICKHLCQETGG 237
Query: 817 SYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEAKVGG 638
SYY+ALDESHLK+L+ ANLI+MGFPQRAAE ++ICSCHKEAKVG
Sbjct: 238 SYYIALDESHLKDLILEHAPPPPAIAEFAIANLIKMGFPQRAAESSVAICSCHKEAKVGD 297
Query: 637 GYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR-YLP 461
GYTCPRCKAR+CELPTEC+ICGLTL+SSPHLARSYHHLFPI PF + LP
Sbjct: 298 GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSMSLYSDQQNKLP 357
Query: 460 KNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVGTV 281
K CFGCQQS+L PGN P V+CPKCKQ+FCLDCDIYIHESLHNCPGC+S RHSK
Sbjct: 358 KACFGCQQSVLGPGNKPGLRVACPKCKQHFCLDCDIYIHESLHNCPGCDSTRHSKIPAAN 417
Query: 280 EG 275
EG
Sbjct: 418 EG 419
>ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citrus clementina]
gi|557522488|gb|ESR33855.1| hypothetical protein
CICLE_v10005033mg [Citrus clementina]
Length = 424
Score = 558 bits (1439), Expect = e-156
Identities = 274/366 (74%), Positives = 301/366 (82%), Gaps = 5/366 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLR----TSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
+YHAQYRRRLR T + ARIQKGLIRYLYIVIDLSRAA EMD++PSRMVVVA+Q EAF
Sbjct: 59 IYHAQYRRRLRGRSLTVATARIQKGLIRYLYIVIDLSRAAAEMDFRPSRMVVVAKQVEAF 118
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
+REFFDQNPLSQIGLVT+KDGVA+CLTDLGGSPESHIKALMGKL SGD+S+QN LDLVH
Sbjct: 119 VREFFDQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSIQNALDLVH 178
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LLNQIP+YGHREVLILYSALSTCDPGDIMETIQKCK SKIRCSVIGLSAE++ICK+LCQ
Sbjct: 179 GLLNQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQ 238
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGG+Y VALDESH KEL+ A+LI+MGFPQRA EG ISICSCHKE
Sbjct: 239 ETGGTYSVALDESHFKELILEHAPPPPAIAEFAIASLIKMGFPQRAGEGSISICSCHKEV 298
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
K+G GYTCPRCKAR+CELPTEC ICGL LVSSPHLARSYHHLFPI PF
Sbjct: 299 KIGVGYTCPRCKARVCELPTECCICGLQLVSSPHLARSYHHLFPIAPFDEATPSRLNDLH 358
Query: 469 YLPKN-CFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKT 293
+ ++ CFGCQQSLL GN CV+CPKCK++FCL+CDIYIHESLHNCPGCES R S
Sbjct: 359 NISRSTCFGCQQSLLASGNKAGLCVACPKCKKHFCLECDIYIHESLHNCPGCESLRQSNP 418
Query: 292 VGTVEG 275
V EG
Sbjct: 419 VVANEG 424
>ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citrus clementina]
gi|567871805|ref|XP_006428492.1| hypothetical protein
CICLE_v10011800mg [Citrus clementina]
gi|557530547|gb|ESR41730.1| hypothetical protein
CICLE_v10011800mg [Citrus clementina]
gi|557530549|gb|ESR41732.1| hypothetical protein
CICLE_v10011800mg [Citrus clementina]
Length = 425
Score = 556 bits (1434), Expect = e-156
Identities = 273/365 (74%), Positives = 300/365 (82%), Gaps = 5/365 (1%)
Frame = -1
Query: 1354 YHAQYRRRLRTSS----AARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFI 1187
YHAQYRRRLR S ARIQKGLIRYLYIVIDLSRAA EMD++PSRM VVA++ EAF+
Sbjct: 61 YHAQYRRRLRDRSLVATTARIQKGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKRVEAFV 120
Query: 1186 REFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHS 1007
REFFDQNPLSQIGLVT+KDGVA+CLTDLGGSPE+HIK LMGKL SGD+SLQN LDLV
Sbjct: 121 REFFDQNPLSQIGLVTVKDGVANCLTDLGGSPEAHIKVLMGKLGCSGDSSLQNALDLVQG 180
Query: 1006 LLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQE 827
LL+QIP+YGHREVLILYSALSTCDPGDIMETIQKCK SKIRCSVIGLSAE++ICK+LCQ+
Sbjct: 181 LLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQD 240
Query: 826 TGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEAK 647
TGGSY VALDESH KEL+ ANLI+MGFPQRA EG ISICSCHKE K
Sbjct: 241 TGGSYSVALDESHFKELIMEHAPPPPAIAEFAIANLIKMGFPQRAGEGSISICSCHKEVK 300
Query: 646 VGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPRY 467
VG GYTCPRCKAR+CELPT+C ICGL LVSSPHLARSYHHLFPI PF PR
Sbjct: 301 VGVGYTCPRCKARVCELPTDCHICGLQLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRN 360
Query: 466 LPKN-CFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTV 290
++ CFGCQQSLL+ GN P CV+CPKCK++FCL+CDIYIHESLHNCPGCES RHS +
Sbjct: 361 RSRSTCFGCQQSLLSSGNKPGLCVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 420
Query: 289 GTVEG 275
EG
Sbjct: 421 VANEG 425
>ref|XP_006489788.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
[Citrus sinensis]
Length = 424
Score = 556 bits (1432), Expect = e-156
Identities = 273/366 (74%), Positives = 301/366 (82%), Gaps = 5/366 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLR----TSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
+YHAQYRRRLR T++ ARIQKGLIRYLYIVIDLSRAA EMD++PSRM VVA+Q EAF
Sbjct: 59 IYHAQYRRRLRGRSLTAATARIQKGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAF 118
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
+REFF QNPLSQIGLVT+KDGVA+CLTDLGGSPESHIKALMGKL SGD+S+QN LDLVH
Sbjct: 119 VREFFYQNPLSQIGLVTVKDGVANCLTDLGGSPESHIKALMGKLGCSGDSSIQNALDLVH 178
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LLNQIP+YGHREVLILYSALSTCDPGDIMETIQKCK SKIRCSVIGLSAE++ICK+LCQ
Sbjct: 179 GLLNQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQ 238
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGG+Y VALDESH KEL+ A+LI+MGFPQRA EG ISICSCHKE
Sbjct: 239 ETGGTYSVALDESHSKELILEHAPPPPAIAEFAIASLIKMGFPQRAGEGSISICSCHKEV 298
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
KVG GYTCPRCKAR+CELPTEC+ICGL LVSSPHLARSYHHLFPI PF
Sbjct: 299 KVGVGYTCPRCKARVCELPTECRICGLQLVSSPHLARSYHHLFPIAPFDEATPSRLNDLH 358
Query: 469 YLPKN-CFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKT 293
+ ++ CFGCQQSLL GN CV+CPKCK++FCL+CDIYIHESLHNCPGCES R S
Sbjct: 359 NISRSTCFGCQQSLLASGNKAGLCVACPKCKKHFCLECDIYIHESLHNCPGCESLRQSNP 418
Query: 292 VGTVEG 275
V EG
Sbjct: 419 VVANEG 424
>ref|XP_004493385.1| PREDICTED: general transcription factor IIH subunit 2-like [Cicer
arietinum]
Length = 422
Score = 556 bits (1432), Expect = e-156
Identities = 268/361 (74%), Positives = 300/361 (83%), Gaps = 5/361 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLR----TSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
++HAQYRRRLR T++ ARIQKGLIRY+YIV+DLS+AA E D++PSRM V+A+Q EAF
Sbjct: 59 IHHAQYRRRLRALAATAATARIQKGLIRYMYIVVDLSKAASERDFRPSRMAVIAKQVEAF 118
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
IREFFDQNPLS +GLVT KDGVA LTDLGGSPESHIKALMGKL SGDASLQN LDLVH
Sbjct: 119 IREFFDQNPLSHVGLVTTKDGVAQSLTDLGGSPESHIKALMGKLECSGDASLQNALDLVH 178
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LNQIP+YGHREVLILYSALSTCDPGD+METIQKCK SKIRCSVIGL+AE++ICK+LCQ
Sbjct: 179 DNLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQ 238
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGG+Y VALDESH KEL+ ANLI+MGFPQRAAEG ++IC+CH+EA
Sbjct: 239 ETGGTYSVALDESHFKELILEHAPPPPAIAEYATANLIKMGFPQRAAEGSVAICTCHEEA 298
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
K GGGYTCPRCK R+CELPTEC+ICGLTL+SSPHLARSYHHLFPI PF P
Sbjct: 299 KTGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFVEISPSSQNDPS 358
Query: 469 Y-LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKT 293
+ P CFGCQ+SLL+ GN P VSCPKCKQ FCLDCDIYIHESLHNCPGCESFRHSK+
Sbjct: 359 HNFPNICFGCQESLLSHGNKPELSVSCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSKS 418
Query: 292 V 290
V
Sbjct: 419 V 419
>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
[Glycine max] gi|571487648|ref|XP_006590708.1| PREDICTED:
general transcription factor IIH subunit 2-like isoform
X2 [Glycine max] gi|571487650|ref|XP_006590709.1|
PREDICTED: general transcription factor IIH subunit
2-like isoform X3 [Glycine max]
gi|571487652|ref|XP_006590710.1| PREDICTED: general
transcription factor IIH subunit 2-like isoform X4
[Glycine max] gi|571487654|ref|XP_006590711.1| PREDICTED:
general transcription factor IIH subunit 2-like isoform
X5 [Glycine max]
Length = 419
Score = 555 bits (1429), Expect = e-155
Identities = 261/360 (72%), Positives = 298/360 (82%), Gaps = 4/360 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSA----ARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
+YHAQYRRRLRT +A ARIQKGLIRYLYIV+DLS+AA E D++PSRMVV+ +Q EAF
Sbjct: 56 IYHAQYRRRLRTLAATAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMVVMGKQVEAF 115
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
IREFFDQNPLS +GLVT+KDG+AHC+T+LGGSPESHIKALMGKL SGDASLQN L+LV
Sbjct: 116 IREFFDQNPLSHVGLVTIKDGIAHCITELGGSPESHIKALMGKLECSGDASLQNALELVL 175
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LNQIP+YGHREVLILYSALSTCDPGD+METIQKCK SKIRCSVIGL+AE+++CK+LC+
Sbjct: 176 GYLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCE 235
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGG+Y VALDESH KEL+ ANLI+MGFPQR+AEG ++IC+CH+EA
Sbjct: 236 ETGGTYSVALDESHFKELILEHAPPPPAIAEYSTANLIKMGFPQRSAEGSVAICTCHEEA 295
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
K GGGYTCPRCK R+CELPTEC++CGLTL+SSPHLARSYHHLFPI F R
Sbjct: 296 KTGGGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYHHLFPIVMFDEVTPSQKDSSR 355
Query: 469 YLPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTV 290
P CFGCQQSLL+ GN P V CPKCKQ FCLDCDIY+HESLHNCPGCES RHSK+V
Sbjct: 356 SFPNTCFGCQQSLLSQGNKPGLSVICPKCKQQFCLDCDIYVHESLHNCPGCESSRHSKSV 415
>ref|XP_006491820.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
[Citrus sinensis] gi|568877611|ref|XP_006491821.1|
PREDICTED: general transcription factor IIH subunit
2-like isoform X2 [Citrus sinensis]
gi|568877613|ref|XP_006491822.1| PREDICTED: general
transcription factor IIH subunit 2-like isoform X3
[Citrus sinensis] gi|568877615|ref|XP_006491823.1|
PREDICTED: general transcription factor IIH subunit
2-like isoform X4 [Citrus sinensis]
Length = 425
Score = 554 bits (1427), Expect = e-155
Identities = 273/365 (74%), Positives = 299/365 (81%), Gaps = 5/365 (1%)
Frame = -1
Query: 1354 YHAQYRRRLRTSS----AARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFI 1187
YHAQYRRRLR S ARIQKGLIRYLYIVIDLSRAA EMD++PSRM VVA+Q EAF+
Sbjct: 61 YHAQYRRRLRDRSLVATTARIQKGLIRYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFV 120
Query: 1186 REFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHS 1007
REFFDQNPLSQIGLVT+KDGVA+CLTDLGGSPE+HIK LMGKL SGD+SLQN LDLV
Sbjct: 121 REFFDQNPLSQIGLVTVKDGVANCLTDLGGSPEAHIKVLMGKLGCSGDSSLQNALDLVQG 180
Query: 1006 LLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQE 827
LL+QIP+YGHREVLILYSALSTCDPGDIMETIQKCK SKIRCSVIGLSAE++ICK+LCQ+
Sbjct: 181 LLSQIPSYGHREVLILYSALSTCDPGDIMETIQKCKESKIRCSVIGLSAEMFICKHLCQD 240
Query: 826 TGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEAK 647
TGGSY VALDESH KEL+ ANLI+MGFPQRA EG ISICSCHKE K
Sbjct: 241 TGGSYSVALDESHFKELIMEHAPPPPAIAEFAIANLIKMGFPQRAGEGSISICSCHKEVK 300
Query: 646 VGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPRY 467
VG GYTCPRCKAR+CELPT+C ICGL LVSSPHLARSYHHLFPI PF PR
Sbjct: 301 VGVGYTCPRCKARVCELPTDCHICGLQLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRN 360
Query: 466 LPKN-CFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTV 290
++ CFGCQQSLL+ GN P V+CPKCK++FCL+CDIYIHESLHNCPGCES RHS +
Sbjct: 361 RSRSTCFGCQQSLLSSGNKPGLYVACPKCKKHFCLECDIYIHESLHNCPGCESLRHSNPI 420
Query: 289 GTVEG 275
EG
Sbjct: 421 VANEG 425
>gb|EPS68872.1| hypothetical protein M569_05896, partial [Genlisea aurea]
Length = 399
Score = 551 bits (1419), Expect = e-154
Identities = 270/351 (76%), Positives = 294/351 (83%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAFIREF 1178
L+HAQYRRRLRT + +R+QKGLIRYLY++IDLSRAA EMDYKP+RMVVVAR EAFIREF
Sbjct: 54 LHHAQYRRRLRTKTDSRVQKGLIRYLYVMIDLSRAASEMDYKPNRMVVVARLMEAFIREF 113
Query: 1177 FDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHSLLN 998
FDQNPLSQIGL+ LKDG+A LT+LGGSPESH+KALMGKL+SSGDASLQNGL+LV LLN
Sbjct: 114 FDQNPLSQIGLIVLKDGIAQVLTELGGSPESHVKALMGKLSSSGDASLQNGLNLVCGLLN 173
Query: 997 QIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETGG 818
IP YGHREVL+LYSALSTCDPGDIMETIQ+C+ KIRCSVIGLSAELYICK+L QETGG
Sbjct: 174 GIPPYGHREVLVLYSALSTCDPGDIMETIQRCRMCKIRCSVIGLSAELYICKHLSQETGG 233
Query: 817 SYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEAKVGG 638
SY VALDE HLKEL+ +LIRMGFPQRAAEG ISICSCHKEAKVG
Sbjct: 234 SYSVALDEGHLKELILEHAPPPPAIAELATPSLIRMGFPQRAAEGAISICSCHKEAKVGT 293
Query: 637 GYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPRYLPK 458
GYTCPRCKAR+CELP ECQICGLTLVSSPHLARSYHHLFPITPF LP
Sbjct: 294 GYTCPRCKARVCELPAECQICGLTLVSSPHLARSYHHLFPITPFDDDDGDGGA----LPG 349
Query: 457 NCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFR 305
NCFGC+Q+L + PAS V CPKCKQ+FCLDCDIYIHESLHNCPGCESFR
Sbjct: 350 NCFGCRQTLSSNAGAPAS-VRCPKCKQHFCLDCDIYIHESLHNCPGCESFR 399
>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
gi|355499974|gb|AES81177.1| General transcription factor
IIH subunit [Medicago truncatula]
Length = 426
Score = 550 bits (1416), Expect = e-154
Identities = 266/365 (72%), Positives = 300/365 (82%), Gaps = 9/365 (2%)
Frame = -1
Query: 1357 LYHAQYRRRLRT----SSAARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
++HAQYRRRLR ++ ARIQKGLIRYLYIV+DLS+AA E D++PSRM V+A+Q E F
Sbjct: 58 IHHAQYRRRLRALASNAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMAVIAKQVELF 117
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
IREFFDQNPLS +GLVT KDGVA+CLTDLGGSPESHIKALMGKL SGDASLQN L+LVH
Sbjct: 118 IREFFDQNPLSHVGLVTTKDGVANCLTDLGGSPESHIKALMGKLECSGDASLQNALELVH 177
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
S LNQIP+YGHREVLILYSALSTCDPGD+METIQKCK SKIRCSVIGL+AE++ICK+LCQ
Sbjct: 178 SNLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQ 237
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGG+Y VALDESH KEL+ ANLI+MGFPQRAAEG ++IC+CH+EA
Sbjct: 238 ETGGTYSVALDESHFKELILEHSPPPPAIAEYATANLIKMGFPQRAAEGSVAICTCHEEA 297
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
K GGGYTCPRCK R+CELPTEC++CGLTL+SSPHLARSYHHLFPI PF P
Sbjct: 298 KTGGGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYHHLFPIVPFAEISPSSQNDPN 357
Query: 469 Y-LPKNCFGCQQSLLN----PGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFR 305
+ P CFGCQQSLL+ GN VSCPKCKQ FCLDCD+YIHESLHNCPGCESFR
Sbjct: 358 HSFPNTCFGCQQSLLSQGFGAGNKAELSVSCPKCKQQFCLDCDMYIHESLHNCPGCESFR 417
Query: 304 HSKTV 290
HSK+V
Sbjct: 418 HSKSV 422
>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2 [Glycine max]
Length = 420
Score = 549 bits (1415), Expect = e-154
Identities = 260/361 (72%), Positives = 297/361 (82%), Gaps = 5/361 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSA----ARIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
+YHAQYRRRLRT +A ARIQKGLIRYLYIV+DLS+AA E D++PSRM V+ +Q EAF
Sbjct: 56 IYHAQYRRRLRTLAATAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMAVMGKQVEAF 115
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
IREFFDQNPLS +GLVT+KDG+AHC+T+LGGSPESHIKALMGKL SGDASLQN L+LV
Sbjct: 116 IREFFDQNPLSHVGLVTIKDGIAHCITELGGSPESHIKALMGKLECSGDASLQNALELVL 175
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LNQIP+YGHREVLILYSALSTCDPGD+METIQKCK SKIRCSVIGL+AE+++CK+LCQ
Sbjct: 176 GYLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQ 235
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGG+Y VALDESH KEL+ ANLI+MGFPQR+AEG ++IC+CH+EA
Sbjct: 236 ETGGTYSVALDESHFKELILEHAPPPPAIAEYATANLIKMGFPQRSAEGSVAICTCHEEA 295
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPFXXXXXXXXXXPR 470
K GGGYTCPRCK R+CELPTEC++CGLTL+SSPHLARSYHHLFPI F
Sbjct: 296 KTGGGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYHHLFPIVMFDEVTPSSQNDSN 355
Query: 469 Y-LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKT 293
+ P CFGCQQSLL+ GN P V CPKCKQ FCLDCDIY+HESLHNCPGCES RHSK+
Sbjct: 356 HSFPNTCFGCQQSLLSQGNKPGLSVICPKCKQQFCLDCDIYVHESLHNCPGCESSRHSKS 415
Query: 292 V 290
V
Sbjct: 416 V 416
>ref|NP_683275.2| transcription initiation factor TFIIH subunit H2 [Arabidopsis
thaliana] gi|22087278|gb|AAM90909.1|AF499443_1
p44/SSL1-like protein [Arabidopsis thaliana]
gi|4056421|gb|AAC97995.1| Similar to gb|Z30094 basic
transcripion factor 2, 44 kD subunit from Homo sapiens.
EST gb|W43325 comes from this gene [Arabidopsis thaliana]
gi|110738828|dbj|BAF01337.1| putative transcription
factor [Arabidopsis thaliana] gi|332189663|gb|AEE27784.1|
transcription initiation factor TFIIH subunit H2
[Arabidopsis thaliana]
Length = 421
Score = 541 bits (1395), Expect = e-151
Identities = 262/366 (71%), Positives = 295/366 (80%), Gaps = 6/366 (1%)
Frame = -1
Query: 1357 LYHAQYRRRLRTSSAA----RIQKGLIRYLYIVIDLSRAAGEMDYKPSRMVVVARQAEAF 1190
+YHAQYRRRLR SAA RIQKGLIRYLYIVID SRAA EMD++PSRM ++A+ EAF
Sbjct: 55 IYHAQYRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAF 114
Query: 1189 IREFFDQNPLSQIGLVTLKDGVAHCLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVH 1010
IREFFDQNPLSQIGLV++K+GVAH LTDLGGSPE+HIKALMGKL + GD+SLQN L+LVH
Sbjct: 115 IREFFDQNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVH 174
Query: 1009 SLLNQIPTYGHREVLILYSALSTCDPGDIMETIQKCKASKIRCSVIGLSAELYICKYLCQ 830
LNQ+P+YGHREVLILYSAL TCDPGDIMETIQKCK SK+RCSVIGLSAE++ICK+LCQ
Sbjct: 175 EHLNQVPSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQ 234
Query: 829 ETGGSYYVALDESHLKELVXXXXXXXXXXXXXXXANLIRMGFPQRAAEGVISICSCHKEA 650
ETGG Y VA+DE HLK+L+ ANLI+MGFPQRAAEG ++ICSCHKE
Sbjct: 235 ETGGLYSVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEV 294
Query: 649 KVGGGYTCPRCKARICELPTECQICGLTLVSSPHLARSYHHLFPITPF--XXXXXXXXXX 476
K+G GY CPRCKAR+C+LPTEC ICGLTLVSSPHLARSYHHLFPI PF
Sbjct: 295 KIGAGYMCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDN 354
Query: 475 PRYLPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSK 296
R L K+CFGCQQSL+ GN P CV+C KCK YFCLDCDIYIHESLHNCPGCES K
Sbjct: 355 RRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCDIYIHESLHNCPGCESIHRPK 414
Query: 295 TVGTVE 278
+V +E
Sbjct: 415 SVSLME 420