BLASTX nr result
ID: Rehmannia24_contig00015134
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00015134
(830 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [... 209 1e-51
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar... 208 2e-51
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 206 1e-50
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 206 1e-50
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 204 2e-50
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] 204 3e-50
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 204 4e-50
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 204 4e-50
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 202 1e-49
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 199 1e-48
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 199 1e-48
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 197 5e-48
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 196 8e-48
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 196 1e-47
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 195 1e-47
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 195 2e-47
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 194 2e-47
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 194 2e-47
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [... 194 4e-47
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 194 4e-47
>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 209 bits (532), Expect = 1e-51
Identities = 112/276 (40%), Positives = 162/276 (58%), Gaps = 1/276 (0%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWES-LKGVLNKAYAYEEAFWKQKSRN 181
W++ N I+ K L L +++ ES + ++ ++ EE +WKQ+SR
Sbjct: 194 WSKEKFPNNLSRINLLMKSLSNLQSGPLEENYRHQESAIWDEMSVLWSREETYWKQRSRL 253
Query: 182 LWLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALP 361
WL GD NTKFFH T+QR++ N IE L+K +G+ +S + +E ++ NLF S P
Sbjct: 254 NWLSAGDANTKFFHTTTLQRRQRNKIETLLKSEGNCISGDQAIREEFGIFFGNLFKSGGP 313
Query: 362 SSDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDT 541
+ +LN + SI+ +QN+ LT E++ A+ L KAPGPDG F+ FW+
Sbjct: 314 RNWGGILNCVHASITEAQNKRLTDPFSMEEVRTAVKQLGSLKAPGPDGFPGLFYDRFWEI 373
Query: 542 VKDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILA 721
+++ + L +NHT + LIPKI PTS++HFRPISLCN YKI+SK+LA
Sbjct: 374 IQNFVNNLVTDFFLGNSRLELLNHTHIVLIPKIPKPTSVNHFRPISLCNNSYKILSKLLA 433
Query: 722 NRLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
NRLKT L + I + Q AFVPGRQI DN+++AHE H
Sbjct: 434 NRLKTLLPMLISQHQNAFVPGRQIQDNILLAHEAFH 469
>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis thaliana]
gi|7267156|emb|CAB77868.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1077
Score = 208 bits (530), Expect = 2e-51
Identities = 113/276 (40%), Positives = 161/276 (58%), Gaps = 1/276 (0%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEE-LNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRN 181
W++ ++ N+ K I +LEE L + +D + + L L AY EE FWKQ+SRN
Sbjct: 261 WSKEHHLNSQKEILSLRVQLEEALTDDAATQD--SVDLLNQNLLLAYRKEETFWKQRSRN 318
Query: 182 LWLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALP 361
LWL GD+N+ FFHA T R+ IN I + G+ V E+++ I Y+Q++F+S
Sbjct: 319 LWLALGDKNSCFFHAATNSRRAINTISVIENSAGTSVYEDSEIIETISDYFQDIFTSQEG 378
Query: 362 SSDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDT 541
+ + +S I+ N L EIK+A +HP+KAPG DG S FFQ+ W T
Sbjct: 379 DRTSVVAEALSPCITTDMNNTLISLPTVAEIKQACLSIHPDKAPGRDGFSASFFQSNWST 438
Query: 542 VKDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILA 721
V ++I + +K+NHT V LIPKI P +S +RPI+LC+ YKII+K+LA
Sbjct: 439 VSEEITAEVQAFFISEILPQKINHTHVRLIPKIPAPQKVSDYRPIALCSVYYKIIAKLLA 498
Query: 722 NRLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RL+ LH CI E+Q+AFVP R I DNV++ HE +H
Sbjct: 499 KRLQPILHSCISENQSAFVPQRAISDNVLITHEALH 534
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 206 bits (523), Expect = 1e-50
Identities = 103/272 (37%), Positives = 160/272 (58%)
Frame = +2
Query: 14 SNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNLWLK 193
++N N+ + I L + R D + L+ L KA++ EE +WKQKSRN W+K
Sbjct: 443 ASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQESLAKAFSDEEIYWKQKSRNQWMK 502
Query: 194 EGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPSSDT 373
EGD+NT +FHACT R N + ++ + G + E+ + ++ N+FS+
Sbjct: 503 EGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTNGIKVSP 562
Query: 374 TLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTVKDD 553
++++ + N LT++ D EI +A+ + +KAPGPDG++ F++N WD V D
Sbjct: 563 IDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYD 622
Query: 554 ICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILANRLK 733
+ M +NHT +C+IPKI NPT++S +RPI+LCN +YK+ISK L NRLK
Sbjct: 623 VILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLK 682
Query: 734 TCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
+ L+ + +SQ AF+PGR I DNV++AHE +H
Sbjct: 683 SHLNSIVSDSQAAFIPGRIINDNVMIAHEVMH 714
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 206 bits (523), Expect = 1e-50
Identities = 103/272 (37%), Positives = 160/272 (58%)
Frame = +2
Query: 14 SNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNLWLK 193
++N N+ + I L + R D + L+ L KA++ EE +WKQKSRN W+K
Sbjct: 669 ASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQESLAKAFSDEEIYWKQKSRNQWMK 728
Query: 194 EGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPSSDT 373
EGD+NT +FHACT R N + ++ + G + E+ + ++ N+FS+
Sbjct: 729 EGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTNGIKVSP 788
Query: 374 TLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTVKDD 553
++++ + N LT++ D EI +A+ + +KAPGPDG++ F++N WD V D
Sbjct: 789 IDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYD 848
Query: 554 ICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILANRLK 733
+ M +NHT +C+IPKI NPT++S +RPI+LCN +YK+ISK L NRLK
Sbjct: 849 VILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLK 908
Query: 734 TCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
+ L+ + +SQ AF+PGR I DNV++AHE +H
Sbjct: 909 SHLNSIVSDSQAAFIPGRIINDNVMIAHEVMH 940
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 204 bits (520), Expect = 2e-50
Identities = 109/275 (39%), Positives = 159/275 (57%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W R + ++A I + KL+ K+ D + LK L++ Y EE FW++KSR +
Sbjct: 285 WKRVSKPSSAVRIQELQFKLDAATKQ-IPFDRRELARLKKELSQEYNNEEQFWQEKSRIM 343
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
W++ GDRNTK+FHA T R+ N I+KLI E+G E +S ++ + E Y++ LF+S
Sbjct: 344 WMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVG 403
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
L ++ +S N L I E++ A F ++P+K PGPDGM+ +Q FW+T+
Sbjct: 404 YTVEELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETM 463
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
D I + MN T +CLIPKI ++ FRPISLCN +YK+I K++AN
Sbjct: 464 GDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMAN 523
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RLK L I E+Q AFV GR I DN+++AHE +H
Sbjct: 524 RLKKILPSLISETQAAFVKGRLISDNILIAHELLH 558
>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
Length = 381
Score = 204 bits (519), Expect = 3e-50
Identities = 106/275 (38%), Positives = 158/275 (57%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W ++ N+N+AK I + ++E + + +L+ L +AY EEAFW+ KSR
Sbjct: 87 WKKAKNTNSAKRIKALTALIDEAHSDP-LCPLSEIHNLRKELLQAYKDEEAFWRNKSRIQ 145
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
WL GDRN +FFHA T R+ N I + G EV E+ KE Y+ +F+S+L
Sbjct: 146 WLTYGDRNIRFFHASTKNRRAKNKILSIQNNLGEEVFGNKEISKEALRYFSEIFTSSLQG 205
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
+ L I+ +S N +L+R + E++ ++F + +APGPDG++ F+Q +WD V
Sbjct: 206 NIQDSLGNINRVVSDECNAYLSRDVTAEEVRISVFSIGATRAPGPDGLTASFYQTYWDIV 265
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
+ +NHT +CLIPKI NP ++ FRPI+LCN +YKIISKIL+
Sbjct: 266 GPAVVEEVRHFFNTGEFYSDLNHTNLCLIPKITNPITMKDFRPIALCNVMYKIISKILSL 325
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
+K+ LH I E+Q+ F+PGR I DNV +AHE +H
Sbjct: 326 CMKSILHFVISENQSGFIPGRHITDNVFLAHEVVH 360
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 204 bits (518), Expect = 4e-50
Identities = 111/279 (39%), Positives = 161/279 (57%), Gaps = 3/279 (1%)
Frame = +2
Query: 2 AWNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWES---LKGVLNKAYAYEEAFWKQK 172
+W + NN N+ I+ LE+ W ++ LK L KAY EEA+WKQK
Sbjct: 247 SWKKQNNLNSLDKINQLEAALEKEQS----LVWPIFQRVSVLKKDLAKAYREEEAYWKQK 302
Query: 173 SRNLWLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSS 352
SR WL+ G+RN+K+FHA Q ++ IEKL +G+ +S + Y+ NLF S
Sbjct: 303 SRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKS 362
Query: 353 ALPSSDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNF 532
+ PS T +G+ +S N+ L ++ EIKEA+F + P APGPDGMS FFQ++
Sbjct: 363 SNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHY 422
Query: 533 WDTVKDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISK 712
W TV + + M + N+T +CLIPK ++PT + RPISLC+ +YKIISK
Sbjct: 423 WSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISK 482
Query: 713 ILANRLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
I+A RL+ L + ++Q+AFV R I DN+++AHE +H
Sbjct: 483 IMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVH 521
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 204 bits (518), Expect = 4e-50
Identities = 111/279 (39%), Positives = 161/279 (57%), Gaps = 3/279 (1%)
Frame = +2
Query: 2 AWNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWES---LKGVLNKAYAYEEAFWKQK 172
+W + NN N+ I+ LE+ W ++ LK L KAY EEA+WKQK
Sbjct: 250 SWKKQNNLNSLDKINQLEAALEKEQS----LVWPIFQRVSVLKKDLAKAYREEEAYWKQK 305
Query: 173 SRNLWLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSS 352
SR WL+ G+RN+K+FHA Q ++ IEKL +G+ +S + Y+ NLF S
Sbjct: 306 SRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKS 365
Query: 353 ALPSSDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNF 532
+ PS T +G+ +S N+ L ++ EIKEA+F + P APGPDGMS FFQ++
Sbjct: 366 SNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHY 425
Query: 533 WDTVKDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISK 712
W TV + + M + N+T +CLIPK ++PT + RPISLC+ +YKIISK
Sbjct: 426 WSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISK 485
Query: 713 ILANRLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
I+A RL+ L + ++Q+AFV R I DN+++AHE +H
Sbjct: 486 IMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVH 524
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 202 bits (514), Expect = 1e-49
Identities = 106/275 (38%), Positives = 159/275 (57%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W R N+ NA I+ ++L++ K W L+ VL AY EE FW+ KSR+
Sbjct: 14 WKRENDFNAKSRITKLRRELDK-EKSATFPSWTQISLLQDVLGDAYREEEDFWRLKSRDK 72
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
W+ GD+N+KFF A + N + L+ E+G+E + E K ++++LFSS+ PS
Sbjct: 73 WMVGGDKNSKFFQATVKANRVSNSLRFLVDENGNEQTVNREKGKIAVTFFEDLFSSSYPS 132
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
S ++L G + ++ NQ LT+++ + EI +A+F ++ APGPDG + FFQ W V
Sbjct: 133 SMDSVLEGFNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDGFTALFFQRQWPLV 192
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
K+ I + NHT +CLIPKI P ++ RPISLC+ +YKIISKIL+
Sbjct: 193 KNQIISDIELFFQTGILPEDWNHTHLCLIPKITKPARMADIRPISLCSVMYKIISKILSA 252
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RLK L + + +Q+AFV R + DN+I+AHE +H
Sbjct: 253 RLKKYLPVIVSPTQSAFVAERLVSDNIILAHEIVH 287
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 199 bits (506), Expect = 1e-48
Identities = 112/275 (40%), Positives = 154/275 (56%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W +S +TI D +L+ ++ +R + E L L +AY EE +W QKSR+L
Sbjct: 69 WRKSLIPFGRQTIEDLKAELDVAQRDDDRSREEITE-LTLRLKEAYRDEEQYWYQKSRSL 127
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
W+K GD N+KFFHA T QR+ N I L E+G ++ Y+QNLF++A P
Sbjct: 128 WMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDIQNIAVSYFQNLFTTANPQ 187
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
L + I+ N LT + E++ ALF +HP KAPGPDGM+ FFQ W +
Sbjct: 188 VFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGPDGMTALFFQKSWAII 247
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
K D+ +++N T +CLIPK + PT ++ RPISLCN YK+ISKIL
Sbjct: 248 KSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILCQ 307
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RLKT L I E+Q+AFV GR I DN+++A E H
Sbjct: 308 RLKTVLPNLISETQSAFVDGRLISDNILIAQEMFH 342
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 199 bits (505), Expect = 1e-48
Identities = 105/275 (38%), Positives = 147/275 (53%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W+R N K+I ++LEE+ G LK L + EE +WKQ+SR
Sbjct: 536 WSRDKIGNIKKSIERCRRELEEMRMRGREDSEPDVHRLKIFLQELLHREEIWWKQRSRIT 595
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
WLKEGDRNT++FH R + N I+KL + DG S E+ + ++++L++
Sbjct: 596 WLKEGDRNTRYFHLKASWRARKNLIKKLRRSDGMMCSKEEELGEIARSFFRDLYTKDESL 655
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
+ LLN I+ N LT+ D EI +ALF + P KAPGPDG FFQ W +
Sbjct: 656 NPGELLNMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRNWGVL 715
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
K D+ MN T++ +IPK P + FRP+SLCN +YK+++K L N
Sbjct: 716 KRDVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVN 775
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RL+ L I E+Q+AFVPGR I DN ++A EC H
Sbjct: 776 RLRPLLQEIISETQSAFVPGRMITDNALVAFECFH 810
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 197 bits (500), Expect = 5e-48
Identities = 106/275 (38%), Positives = 150/275 (54%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W S+++NA I K L+ K W E +K L+ AY EE FW+QKSR
Sbjct: 284 WKHSSDTNAQSRIKRLRKDLDA-EKSIQIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQK 342
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
WL GD+NT FFHA + N + L+ E+ E + + K +++NLF+S
Sbjct: 343 WLAGGDKNTGFFHATVHSERLKNELSFLLDENDQEFTRNSDKGKIASSFFENLFTSTYIL 402
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
+ L G+ ++ N L +++ +LE+ A+F ++ APGPDG + FFQ WD V
Sbjct: 403 THNNHLEGLQAKVTSEMNHNLIQEVTELEVYNAVFSINKESAPGPDGFTALFFQQHWDLV 462
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
K I + + NHT +CLIPKI +P +S RPISLC+ +YKIISKIL
Sbjct: 463 KHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLRPISLCSVLYKIISKILTQ 522
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RLK L + +Q+AFVP R I DN+++AHE IH
Sbjct: 523 RLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIH 557
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 196 bits (498), Expect = 8e-48
Identities = 107/276 (38%), Positives = 155/276 (56%), Gaps = 1/276 (0%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEEL-NKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRN 181
W++ N + I T +KL EL + + + +L L+ A E +W+Q SR
Sbjct: 646 WSKCNFGHLPNQIKITREKLGELLDAPPSHHTAELRNALTKQLDSLMAKNEVYWRQCSRA 705
Query: 182 LWLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALP 361
WLK GDRN+KFFH R++ N I L E G ++ + + + Y+Q+LFSS
Sbjct: 706 TWLKAGDRNSKFFHYKASSRRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHLFSSTGS 765
Query: 362 SSDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDT 541
S T +++G+ ++ NQ L EIK ALF +HP+KAPGPDG SP F+Q +W
Sbjct: 766 SEYTEVVDGVRGRVTEEMNQALLAVFTPEEIKIALFQMHPSKAPGPDGFSPFFYQKYWPI 825
Query: 542 VKDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILA 721
V +D+ +L+++N T V LIPK+ P ++ RPISLCN +YKI +K+L
Sbjct: 826 VGEDVVAAVLHFFKTGKLLKRINFTHVALIPKVHEPKNMMQLRPISLCNVLYKIGAKVLT 885
Query: 722 NRLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RLK L I ++Q+AFVPGR I DN I+A E +H
Sbjct: 886 TRLKAILPTLISDTQSAFVPGRAISDNSIVAFELLH 921
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 196 bits (497), Expect = 1e-47
Identities = 108/275 (39%), Positives = 148/275 (53%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W + NSN+AK I + LE + D S+ L AY EE FWKQ SR
Sbjct: 226 WTKEQNSNSAKAIKKAQQALESA-LSADIPDPSLIGSITQELEAAYRQEELFWKQWSRVQ 284
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
WL GDRN +FHA T R+ +N + + G E ++ I Y+QN+F+++ S
Sbjct: 285 WLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEEQIASTISSYFQNIFTTSNNS 344
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
+ +S IS N+ L + LEIKEALF + +KAPGPDG S FF +WD +
Sbjct: 345 DLQVVQEALSPIISSHCNEELIKISSLLEIKEALFSISADKAPGPDGFSASFFHAYWDII 404
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
+ D+ + ++N T V LIPKI P +S +RPI+LCN YKI++KIL
Sbjct: 405 EADVSRDIRSFFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVAKILTR 464
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RL+ L I Q+AFVPGR I DNV++ HE +H
Sbjct: 465 RLQPWLSELISLHQSAFVPGRAIADNVLITHEILH 499
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 195 bits (496), Expect = 1e-47
Identities = 102/275 (37%), Positives = 160/275 (58%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W++ SN + ++D +E+L++ L + K + +E +W Q+SR
Sbjct: 893 WSKEKFSNPSVQVADLLSDIEKLHQSNPPDAHHQINILTDQVTKLWTQDEMYWHQRSRVN 952
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
WLK GD+N+ FFH T+QR++ N I +L + G+ + S +V + Y+ L+ S P
Sbjct: 953 WLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGPQ 1012
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
+L+ + +++ N+ L+ + LE+K+A+FDL KAPGPDG S F+QN W+ V
Sbjct: 1013 QWEEVLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGATKAPGPDGFSGIFYQNQWEWV 1072
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
+ I +L+ MN T + LIPK+K PT SH+RPI+LCN YKI++KI+A+
Sbjct: 1073 QSIIHESALQHQTSSSLLQVMNRTHLALIPKVKAPTHPSHYRPIALCNFSYKILTKIIAS 1132
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RL+ + I ++Q+AFV RQI DNVI+AHE H
Sbjct: 1133 RLQPFMSELISDNQSAFVSNRQIQDNVIIAHEIYH 1167
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 195 bits (495), Expect = 2e-47
Identities = 98/240 (40%), Positives = 139/240 (57%), Gaps = 2/240 (0%)
Frame = +2
Query: 116 LKGVLNKAYAYEEAFWKQKSRNLWLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVS 295
++ +N EE +W+Q+SR WLKEGDRNTK+FH+ R++ N I + G
Sbjct: 297 IENQINGMLMDEEIYWRQRSRAEWLKEGDRNTKYFHSKASARRRKNKIWGIENSHGQWTE 356
Query: 296 SRIEVVKEIEGYYQNLFSSALPSSDTT--LLNGISNSISCSQNQWLTRQIGDLEIKEALF 469
+ EV KE Y+QNLF+++ P+ L+GIS ++ + N L + EI EAL
Sbjct: 357 DQREVEKEFCEYFQNLFTTSSPNQSQIQDALDGISPKVTTNMNHQLEEPFTEEEIVEALH 416
Query: 470 DLHPNKAPGPDGMSPCFFQNFWDTVKDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNP 649
+ P KAPGPDG+ FFQ W TV+ + L +NHT + LIPK P
Sbjct: 417 QMSPTKAPGPDGLPAAFFQKHWQTVRSSVIGTCMHILNEGGNLSALNHTFIALIPKTTKP 476
Query: 650 TSISHFRPISLCNTVYKIISKILANRLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
++ FRPISLCN +Y+I++K +ANRLK L I +Q+AF+P R I DNVI+ +EC+H
Sbjct: 477 KKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQSAFIPNRLISDNVIIGYECLH 536
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 194 bits (494), Expect = 2e-47
Identities = 100/271 (36%), Positives = 153/271 (56%)
Frame = +2
Query: 17 NNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNLWLKE 196
+N N+ I+ L++ NR + + ++ L AY EE +W+QKSRN W+KE
Sbjct: 670 SNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKE 729
Query: 197 GDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPSSDTT 376
GDRNT+FFHACT R +N + + E+G E+ + ++ ++ S
Sbjct: 730 GDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSII 789
Query: 377 LLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTVKDDI 556
G ++ N LT+ + DLEI A+ + +KAPGPDG++ F+++ W+ V D+
Sbjct: 790 DFAGFKPIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDV 849
Query: 557 CXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILANRLKT 736
M + +NHT +C+IPKI NP ++S +RPI+LCN +YKIISK L RLK
Sbjct: 850 IKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKG 909
Query: 737 CLHLCICESQTAFVPGRQILDNVIMAHECIH 829
L + +SQ AF+PGR + DNV++AHE +H
Sbjct: 910 HLDAIVSDSQAAFIPGRLVNDNVMIAHEMMH 940
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 194 bits (494), Expect = 2e-47
Identities = 100/271 (36%), Positives = 153/271 (56%)
Frame = +2
Query: 17 NNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNLWLKE 196
+N N+ I+ L++ NR + + ++ L AY EE +W+QKSRN W+KE
Sbjct: 650 SNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKE 709
Query: 197 GDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPSSDTT 376
GDRNT+FFHACT R +N + + E+G E+ + ++ ++ S
Sbjct: 710 GDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSII 769
Query: 377 LLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTVKDDI 556
G ++ N LT+ + DLEI A+ + +KAPGPDG++ F+++ W+ V D+
Sbjct: 770 DFAGFKPIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDV 829
Query: 557 CXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILANRLKT 736
M + +NHT +C+IPKI NP ++S +RPI+LCN +YKIISK L RLK
Sbjct: 830 IKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKG 889
Query: 737 CLHLCICESQTAFVPGRQILDNVIMAHECIH 829
L + +SQ AF+PGR + DNV++AHE +H
Sbjct: 890 HLDAIVSDSQAAFIPGRLVNDNVMIAHEMMH 920
>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 194 bits (492), Expect = 4e-47
Identities = 107/276 (38%), Positives = 155/276 (56%), Gaps = 1/276 (0%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEEL-NKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRN 181
W++ N + I T +KL EL + + + L L+ A E +W+Q+SR
Sbjct: 557 WSKCNFGHLPNQIKITQEKLGELLDAPPSHHTVELRNVLTKQLDSLMAKNEVYWRQRSRA 616
Query: 182 LWLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALP 361
WLK GDRN+KFFH R++ N I L E G ++ + + + Y+Q+LFSS
Sbjct: 617 TWLKAGDRNSKFFHYKASSRRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHLFSSTGS 676
Query: 362 SSDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDT 541
S T +++G+ ++ NQ L + EIK ALF +HP+KAPGPDG SP F+Q +W
Sbjct: 677 SEYTGVVDGVRGRVTEEMNQTLLAEFTPEEIKIALFQMHPSKAPGPDGFSPFFYQKYWQI 736
Query: 542 VKDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILA 721
V +D+ +L+K+N T V LIPK+ P ++ R ISL N +YKI +K+LA
Sbjct: 737 VGEDVVAAVLHFFKTGKLLKKINFTHVALIPKVHEPKNMMQLRLISLFNVLYKIGAKVLA 796
Query: 722 NRLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RLK L I ++Q+AFVPGR I DN I+A E +H
Sbjct: 797 TRLKAILPTLISDTQSAFVPGRAISDNSIVAFELLH 832
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 194 bits (492), Expect = 4e-47
Identities = 102/275 (37%), Positives = 156/275 (56%)
Frame = +2
Query: 5 WNRSNNSNAAKTISDTSKKLEELNKEGNRRDWKAWESLKGVLNKAYAYEEAFWKQKSRNL 184
W R +N A+ I +++ ++ + + L+ LN+AY EE +W KSRN
Sbjct: 647 WKRRTKTNTAEKIETLKYRVDAAERD-HTLPHQTILRLRQDLNQAYRDEELYWHLKSRNR 705
Query: 185 WLKEGDRNTKFFHACTVQRQKINCIEKLIKEDGSEVSSRIEVVKEIEGYYQNLFSSALPS 364
W+ GDRNT FF+A T R+ N I+ + G E + K E Y+ +LF++ S
Sbjct: 706 WMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTTTQTS 765
Query: 365 SDTTLLNGISNSISCSQNQWLTRQIGDLEIKEALFDLHPNKAPGPDGMSPCFFQNFWDTV 544
+++GI+ ++ N L + + D E+++A+F + ++APG DG + F+ + WD +
Sbjct: 766 DWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDGFTAAFYHHLWDLI 825
Query: 545 KDDICXXXXXXXXXXXMLRKMNHTLVCLIPKIKNPTSISHFRPISLCNTVYKIISKILAN 724
+D+C M ++N T +CLIPKI +P +S +RPISLC YKIISKIL
Sbjct: 826 GNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPISLCTASYKIISKILIK 885
Query: 725 RLKTCLHLCICESQTAFVPGRQILDNVIMAHECIH 829
RLK CL I +SQ AFVPG+ I DNV++AHE +H
Sbjct: 886 RLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLH 920