BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00014942
         (2838 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...  1413   0.0  
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...  1388   0.0  
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...  1353   0.0  
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...  1331   0.0  
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]      1323   0.0  
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...  1309   0.0  
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...  1300   0.0  
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...  1288   0.0  
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom...  1277   0.0  
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...  1276   0.0  
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise...  1258   0.0  
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...  1253   0.0  
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...  1235   0.0  
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...  1233   0.0  
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform...  1231   0.0  
ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachy...  1228   0.0  
tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...  1225   0.0  
ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [A...  1224   0.0  
ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [S...  1222   0.0  
ref|XP_004985595.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...  1221   0.0  

>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score = 1413 bits (3658), Expect = 0.0
 Identities = 685/917 (74%), Positives = 758/917 (82%), Gaps = 34/917 (3%)
 Frame = +2

Query: 2    GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 181
            GGGR +R LNVAEKPSVAKAVSGILSK    GG+RVRDGRSRYN+IFEFNYTI+NQ   M
Sbjct: 4    GGGRVIRVLNVAEKPSVAKAVSGILSKN-QPGGMRVRDGRSRYNKIFEFNYTIRNQPCQM 62

Query: 182  SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 361
             FTSVTGHLMEL+F++RYRKWHSCDP+DLY+APV+K+VPEDK +I++TLE EAR CQW++
Sbjct: 63   LFTSVTGHLMELEFDERYRKWHSCDPLDLYNAPVRKFVPEDKLDIKRTLEAEARSCQWIV 122

Query: 362  LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAV 541
            LWLDCDREGENIAFEV++VC +AN NLN+WRARFSALIDREIH SVQ LV+PNQLFSDAV
Sbjct: 123  LWLDCDREGENIAFEVLDVCRQANHNLNVWRARFSALIDREIHQSVQTLVQPNQLFSDAV 182

Query: 542  DARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQ 721
            D RQEIDLRIGASFTRFQTMLLR AFVLDFATD+ N++LSYGPCQFPTLGF+VER+WE+Q
Sbjct: 183  DVRQEIDLRIGASFTRFQTMLLRGAFVLDFATDDRNIVLSYGPCQFPTLGFVVERYWEIQ 242

Query: 722  SHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKL 901
            +HEPEEFWTINCTHNS+EGTATFNWMRGHLFDYTC   IYEMC+QEP ATVT V+QQEKL
Sbjct: 243  AHEPEEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVTIYEMCIQEPIATVTKVKQQEKL 302

Query: 902  KYPPHPLSTIELEKRASRYFRMSSEHTMK----------------------------TIV 997
            KYPPHPLSTIELEKRASRYFRMSSE TMK                            T+V
Sbjct: 303  KYPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDSFSEKTDLRTMV 362

Query: 998  QEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVY 1177
            QEQ+GHPVWG YAQRLLDP++ LWRNP+GGGHDDKAHPPIHPTKFSAGE+ WS DHH+VY
Sbjct: 363  QEQEGHPVWGIYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHHRVY 422

Query: 1178 ELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTY 1357
            ELVVRHFLACVSQPA+GAET VEIDIAGE FSA GRVI+AKNYLDVYRFE+WGGS+IPTY
Sbjct: 423  ELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTY 482

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
            ++GQQFTPTTLTLD+GVTRPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDRFYA KD
Sbjct: 483  SFGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKD 542

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
            S+ RFSPTKLGEALVMGYDDMGYELWKPYLRAMME DMKAVS+GTKRKAEVLE CLQQMK
Sbjct: 543  SNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCLQQMK 602

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
            ACF DAR NKGKL EAMA+FFERSNRS+  EQ A+G+VVR+CGLC ESDMVLR+KPDGNF
Sbjct: 603  ACFSDARTNKGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPDGNF 662

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGCLG+PQCRNVVWLPGSVSEA VT N C++CSPGPV+ IQFKFRRLEIPPNY+V HLG
Sbjct: 663  MVGCLGYPQCRNVVWLPGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNYSVQHLG 722

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXW----QTGHS 2245
            CIGGCDDILRQLVE+CGTGSRNNS+                              QTGH 
Sbjct: 723  CIGGCDDILRQLVEICGTGSRNNSNTSGRGRGNPTASSSAQRGNSRAQSSCAYCRQTGHL 782

Query: 2246 SGSYANAPESSRGRNSRSQEA--GESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGC 2419
            S    +  ++SRGR +R+QE   GESSIPC+SCGAPC LRTANT  NRGRKF+SCQ+Q C
Sbjct: 783  SNDCPS--QASRGRTARAQEVDNGESSIPCNSCGAPCILRTANTANNRGRKFFSCQSQEC 840

Query: 2420 NFFVWEDNASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISGRC 2599
            NFFVWEDN  +GG   R +                            F+SATGEPI+GRC
Sbjct: 841  NFFVWEDNL-NGGRAERAN-TSASTSSGRGGRGRGRGQSGAHSSNVSFVSATGEPITGRC 898

Query: 2600 FVCGDPGHFANACPNRG 2650
            F+CGDPGHFAN CP RG
Sbjct: 899  FICGDPGHFANVCPRRG 915


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score = 1388 bits (3592), Expect = 0.0
 Identities = 675/913 (73%), Positives = 748/913 (81%), Gaps = 30/913 (3%)
 Frame = +2

Query: 2    GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 181
            GGGR +R LNVAEKPSVAKAVSGILSK    GG+RVRDGRSRYN+IFEFNYTI+NQ   M
Sbjct: 4    GGGRVIRVLNVAEKPSVAKAVSGILSKN-QPGGIRVRDGRSRYNKIFEFNYTIRNQPCQM 62

Query: 182  SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 361
             FTSVTGHLME++F +RYRKWHSCDP+DLY+AP++K+VPEDK +I++TLE EAR CQW+I
Sbjct: 63   LFTSVTGHLMEIEFHERYRKWHSCDPLDLYNAPIRKFVPEDKLDIKRTLEAEARSCQWII 122

Query: 362  LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAV 541
            LWLDCDREGENIAFEV++VC +AN NL +WRARFSALIDREIH SVQ LV+PNQLFSDAV
Sbjct: 123  LWLDCDREGENIAFEVLDVCRQANHNLTVWRARFSALIDREIHQSVQTLVQPNQLFSDAV 182

Query: 542  DARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQ 721
            D RQEIDLRIGASFTRFQTMLLR AFVLDFATD+ N++LSYGPCQFPTLGF+VER+WE+Q
Sbjct: 183  DVRQEIDLRIGASFTRFQTMLLRGAFVLDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQ 242

Query: 722  SHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKL 901
            +HEPEEFWTINCTHNS+EGTATFNWMRGHLFDYTC  +IYEMC+QEP ATVT V+QQEKL
Sbjct: 243  AHEPEEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVMIYEMCIQEPIATVTKVKQQEKL 302

Query: 902  KYPPHPLSTIELEKRASRYFRMSSEHTMK----------------------------TIV 997
            KYPPHPLSTIELEKRASRYFRMSSE TMK                            T+V
Sbjct: 303  KYPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDCFSDKTDLRTMV 362

Query: 998  QEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVY 1177
            QEQ+GHPVWG+YAQRLLDP++ LWRNP+GGGHDDKAHPPIHPTKFSAGE+ WS DHH+VY
Sbjct: 363  QEQEGHPVWGTYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHHRVY 422

Query: 1178 ELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTY 1357
            ELVVRHFLACVSQPA+GAET VEIDIAGE FSA GRVI+AKNYLDVYRFE+WGGS+IPTY
Sbjct: 423  ELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTY 482

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
            ++GQQFTPTTLTLD+GV RPPPLLSEADLL CMDKAGIGTDATMHDHIKKLLDRFYA KD
Sbjct: 483  SFGQQFTPTTLTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKD 542

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
            S+ RFSPTKLGEALVMGYDDMGYELWKPYLRAMME DMKAVS GTKRKAEVLE CLQQMK
Sbjct: 543  SNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCLQQMK 602

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
            ACF DAR NK KL EAMA+FFERSNRS+S EQ A+G VVR+CGLC ESDMVLR+KPDGNF
Sbjct: 603  ACFSDARTNKEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKPDGNF 662

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGCLG+PQCRNVVWLPGSVSEA VT N C TCSPGPV+ IQFKFR+ EIPP+Y+V HLG
Sbjct: 663  MVGCLGYPQCRNVVWLPGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDYSVQHLG 722

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSY 2257
            CIGGCDDILRQLVE+CGTGSRN+                            QTGH S   
Sbjct: 723  CIGGCDDILRQLVEICGTGSRNSRGRGNPTAFSSAQRDNSRAQSSCAYCR-QTGHLSNDC 781

Query: 2258 ANAPESSRGRNSRSQEA--GESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFV 2431
             +  ++SR R +R+QE   GESS+PC+SCGAPC LRTANT  NRGRKF+SCQ+  CNFFV
Sbjct: 782  PS--QASRDRTARAQEVDNGESSMPCNSCGAPCILRTANTANNRGRKFFSCQSSECNFFV 839

Query: 2432 WEDNASSGGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISGRCFVCG 2611
            WEDN  SGG   R +                            F+SATGEPI+ RCF+CG
Sbjct: 840  WEDNL-SGGRAERAN-TSASTSSGRGGRGRGRGQSGAHSSNVSFVSATGEPITVRCFICG 897

Query: 2612 DPGHFANACPNRG 2650
            DPGHFAN CP RG
Sbjct: 898  DPGHFANVCPRRG 910


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score = 1353 bits (3503), Expect = 0.0
 Identities = 659/917 (71%), Positives = 739/917 (80%), Gaps = 39/917 (4%)
 Frame = +2

Query: 17   LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 196
            ++ LNVAEKPSVAKAV+ ILS+     GLRVR+GRSRYN++FEFNY+I+ Q   M  TSV
Sbjct: 1    MKVLNVAEKPSVAKAVATILSRNQ---GLRVREGRSRYNKLFEFNYSIRGQHCQMVVTSV 57

Query: 197  TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 376
             GHLMEL+FEDR+RKWHSCDP  LYHAPV+K+VPEDK +I++TLEEEARKCQWL+LWLDC
Sbjct: 58   IGHLMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDC 117

Query: 377  DREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVDARQE 556
            DREGENIAFEV+EVC + NR++++WRARFSALIDREIH SVQ+LVRPNQLF+DAVD RQE
Sbjct: 118  DREGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQE 177

Query: 557  IDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSHEPE 736
            IDLRIGASFTRFQTMLLRDAFVLDFA D+ N++LSYGPCQFPTLGF+VER+WE+QSHEPE
Sbjct: 178  IDLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPE 237

Query: 737  EFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLKYPPH 916
            EFWTINC+H S+EGT+TFNWMR HLFDYTCA IIYEMC+QEPTATVT VRQQEKLKYPPH
Sbjct: 238  EFWTINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCIQEPTATVTKVRQQEKLKYPPH 297

Query: 917  PLSTIELEKRASRYFRMSSEHTMKT----------------------------IVQEQQG 1012
            PL+TIELEKRASRYF MSSEHTMK                             IVQEQ G
Sbjct: 298  PLNTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSERTDLHGIVQEQLG 357

Query: 1013 HPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYELVVR 1192
            HP+WGSYAQRLLDP A LWRNP+ GGHDDKAHPPIHPTKFSAGESGWS DH ++YELVVR
Sbjct: 358  HPIWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVR 417

Query: 1193 HFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQQ 1372
            HFLACVSQPA+GAET VEIDIAGE FS+SGRVIIAKNYLDVYRFE+WGGSMIPTY +GQQ
Sbjct: 418  HFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQ 477

Query: 1373 FTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSSMRF 1552
            F PTTLTLD+GVTRPPPLLSEADLL+CMDKAGIGTDATMHDHIKKLLDRFYATKDS+ RF
Sbjct: 478  FIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRF 537

Query: 1553 SPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFVD 1732
            SPT LGEALVMGYDDMGYELWKPYLR+MME DMKAVS+GTKR+ EVL  CL+QMKACF+D
Sbjct: 538  SPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLD 597

Query: 1733 ARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCL 1912
            ARLNK KL EAMA+FFERSNRS+ +EQH +G+VVR+C LCQESDMVLR+KPDGNFMVGCL
Sbjct: 598  ARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCL 657

Query: 1913 GFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGGC 2092
            G+PQCRNVVWLPGS+SEA +TT  C+ C+PGPVY IQFKFRRLEIPPNYN++HLGC+ GC
Sbjct: 658  GYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGC 717

Query: 2093 DDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSYANAPE 2272
            D+ILRQL E+CGTGSR  S+                          QTGHSS    +   
Sbjct: 718  DEILRQLTEICGTGSR-ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVP 776

Query: 2273 SSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWED-- 2440
             SR   S   +  +GESSIPC+ CG PC LRTANT  NRGRKFYSCQ+Q CNFFVWED  
Sbjct: 777  RSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSL 836

Query: 2441 NASSGG------TVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISG-RC 2599
            N+SSGG      T    +                            F+SATG+P+SG RC
Sbjct: 837  NSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSGRRC 896

Query: 2600 FVCGDPGHFANACPNRG 2650
            FVCGDP HFAN CPNRG
Sbjct: 897  FVCGDPSHFANVCPNRG 913


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score = 1331 bits (3444), Expect = 0.0
 Identities = 654/923 (70%), Positives = 733/923 (79%), Gaps = 42/923 (4%)
 Frame = +2

Query: 8    GRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSF 187
            GR +  LNVAEKPSVAK+V+ ILS+     GLRVRDGRSRYNRIFEFNYTI+ Q  HM F
Sbjct: 3    GRGVTVLNVAEKPSVAKSVANILSRNQ---GLRVRDGRSRYNRIFEFNYTIRGQPCHMLF 59

Query: 188  TSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILW 367
            TSV GHLMEL+FEDRYRKWHSCDP DLYHAPV+K VPEDK +I++TLEEEAR+CQWL+LW
Sbjct: 60   TSVIGHLMELEFEDRYRKWHSCDPADLYHAPVRKSVPEDKKDIKRTLEEEARRCQWLVLW 119

Query: 368  LDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVDA 547
            LDCDREGENIAFEVV+VCT AN +L I RARFSALIDREIH +VQ+LV PN+ F+DAVDA
Sbjct: 120  LDCDREGENIAFEVVDVCTAANPHLTIKRARFSALIDREIHQAVQNLVEPNKWFADAVDA 179

Query: 548  RQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSH 727
            RQEIDLRIGASFTRFQTML++DAF++D  TD+ N+ILSYGPCQFPTLGF+VER+WE+Q+H
Sbjct: 180  RQEIDLRIGASFTRFQTMLMKDAFIIDTITDDRNIILSYGPCQFPTLGFVVERYWEIQAH 239

Query: 728  EPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLKY 907
            EPEEFW+INC+H S+EG A F+W RGHLFDYTCA IIYEMC +EPTATVTNVRQQEKLKY
Sbjct: 240  EPEEFWSINCSHRSDEGVANFSWGRGHLFDYTCAVIIYEMCTEEPTATVTNVRQQEKLKY 299

Query: 908  PPHPLSTIELEKRASRYFRMSSEHTMKT----------------------------IVQE 1003
            PPHPLSTIELEKRASRYFRMSSEHTMK                             IVQE
Sbjct: 300  PPHPLSTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPRTETDNFSSRTDLHAIVQE 359

Query: 1004 QQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYEL 1183
            QQGHP WG YAQRLLDPEA LWRNP GGGHDDKAHPPIHPTKFSAGESGWS DH K+YEL
Sbjct: 360  QQGHPQWGVYAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRKLYEL 419

Query: 1184 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNY 1363
            VVRHFLACVS+PA+GAETTVEIDIAGE FSA GRVI+ KNYLDVY++E+WGGS+IPTY  
Sbjct: 420  VVRHFLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIPTYTI 479

Query: 1364 GQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSS 1543
            GQQF PTTLTLD+GVTRPPP LSEADLLSCMDK GIGTDATMHDHIKKLLDRFYATKD+S
Sbjct: 480  GQQFIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDAS 539

Query: 1544 MRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKAC 1723
            MRF+PT LGEALVMGYDDMGY+LWKPYLRA+ME DMK+VS GTK K EVL+  LQQMKAC
Sbjct: 540  MRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQMKAC 599

Query: 1724 FVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMV 1903
            F+DARLNK KL EAM +FFERSNRS   EQ+AIGEVVR+CGLC+ESDMVL+K  DGNFMV
Sbjct: 600  FLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDGNFMV 659

Query: 1904 GCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCI 2083
            GCLGFPQCRN VWLPGSVSEA+VTTN CS C+PGPVY IQFKFR+LEIPPNY+VNHLGCI
Sbjct: 660  GCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNHLGCI 719

Query: 2084 GGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSYAN 2263
            GGCD+IL QL E+CGTG R  +                           +TGHSS    +
Sbjct: 720  GGCDEILTQLTEICGTGPRMPAR-PRGPTTSTGNAHHTNPRQAVCMNCQETGHSSNDCPS 778

Query: 2264 APESSRGRNSR------SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNF 2425
              ++ R RN+R      +Q++GE+S+ C+SCG PC LRTANT  NRGRKFYSC +Q CNF
Sbjct: 779  --QTLRSRNARQHGNVMNQQSGEASVSCNSCGTPCVLRTANTANNRGRKFYSCPSQECNF 836

Query: 2426 FVWEDNASS---GGTVPRG----SIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEP 2584
            FVWED+ +S   GG+  R     +                            F+SATG+P
Sbjct: 837  FVWEDDLNSGTGGGSFTRSNSIPTSNRGRNGRNGGRGARGRGRNASSSSNVTFVSATGDP 896

Query: 2585 ISG-RCFVCGDPGHFANACPNRG 2650
            ISG RCFVCGDP HFAN CPNRG
Sbjct: 897  ISGRRCFVCGDPSHFANVCPNRG 919


>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
          Length = 914

 Score = 1323 bits (3425), Expect = 0.0
 Identities = 647/913 (70%), Positives = 722/913 (79%), Gaps = 35/913 (3%)
 Frame = +2

Query: 17   LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 196
            ++ LNVAEKPSVAK+VSGILS+     GLRVRDGRSR+NRIFEFNY+++ Q  HM FTSV
Sbjct: 5    IKVLNVAEKPSVAKSVSGILSRNQ---GLRVRDGRSRFNRIFEFNYSVRGQPCHMLFTSV 61

Query: 197  TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 376
            TGHLMEL+FEDR+RKWHSCDP DLYHAPV+K+VPEDK +I++TLEEEAR+CQWL+LWLDC
Sbjct: 62   TGHLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDC 121

Query: 377  DREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVDARQE 556
            DREGENIAFEV++VC   N +L I RARFSALI+REIH++ Q+LV PN  FSDAVDARQE
Sbjct: 122  DREGENIAFEVIDVCRAVNCHLTIRRARFSALIEREIHHATQNLVDPNPWFSDAVDARQE 181

Query: 557  IDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSHEPE 736
            IDLRIGASFTRFQTM+LRD FV+D ATD+ N++LSYGPCQFPTLGF+VER+WEVQSHEPE
Sbjct: 182  IDLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPE 241

Query: 737  EFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLKYPPH 916
            EFWTINC+H  +EG ATFNWMRGHLFD+TCA I+YEMCVQEP ATVT VR QEKLKYPP+
Sbjct: 242  EFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQEPNATVTKVRHQEKLKYPPY 301

Query: 917  PLSTIELEKRASRYFRMSSEHTMKT----------------------------IVQEQQG 1012
            PLSTIELEKRASRYFRMSSEHTMK                             IVQEQQ 
Sbjct: 302  PLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTDLHAIVQEQQD 361

Query: 1013 HPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYELVVR 1192
            HP WGSYAQRLLDP  SLWRNP+ GGHDDKAHPPIHPTKFSAGE  WS DH K+YELVVR
Sbjct: 362  HPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYELVVR 421

Query: 1193 HFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQQ 1372
            HFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYLDVYR+E+WGGSMIPTY  GQQ
Sbjct: 422  HFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQ 481

Query: 1373 FTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSSMRF 1552
            F PT+LTLD GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDS+ RF
Sbjct: 482  FIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRF 541

Query: 1553 SPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFVD 1732
            SPTKLGEALVMGYDDMGYELWKP LR+MME DMK VS+G KRK EVL  CLQQMKACF+D
Sbjct: 542  SPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLD 601

Query: 1733 ARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCL 1912
            ARLNK KL EAMAVFFERSN+S  ++ H  GEVVR+CGLC+ES MVL+K  DGNFMVGCL
Sbjct: 602  ARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCL 661

Query: 1913 GFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGGC 2092
            GFPQCRN +WLPGSV EA VT+NIC +C+PGPVYLIQFKFR+LEIPP +N NHLGCIGGC
Sbjct: 662  GFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCIGGC 721

Query: 2093 DDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSYANAPE 2272
            DDILRQL+E+CGTGSR  S+                          QTGHSS    +   
Sbjct: 722  DDILRQLIEICGTGSR-MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFS 780

Query: 2273 SSRGRNSR-SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWED--- 2440
             SR   SR S + GE S+ CS+CG PC LRTANT  NRGRKFYSC +Q CNFF+WED   
Sbjct: 781  GSRNSRSRTSSQNGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWEDEHN 840

Query: 2441 NASSGGTVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISG-RCFVCG 2611
            N + G ++PR  I                             F+SATG+PISG RC+VCG
Sbjct: 841  NGTGGRSIPRAGINGSASNSSRGGGRGRGRFGQNGARAADVTFVSATGDPISGRRCYVCG 900

Query: 2612 DPGHFANACPNRG 2650
            DP HFAN CPNRG
Sbjct: 901  DPSHFANVCPNRG 913


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score = 1309 bits (3387), Expect = 0.0
 Identities = 638/912 (69%), Positives = 725/912 (79%), Gaps = 34/912 (3%)
 Frame = +2

Query: 17   LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 196
            +R LNVAEKPSVAK+V+ ILS+     GLR+R+GRSRYN+I+EFNY+I      M FTSV
Sbjct: 2    VRVLNVAEKPSVAKSVANILSR---GQGLRMREGRSRYNKIYEFNYSINGCHCQMLFTSV 58

Query: 197  TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 376
            TGHLMEL+FEDR+RKWHSCDP  L+ APV+K+VPEDK +I++TLEEEAR CQWL+LWLDC
Sbjct: 59   TGHLMELEFEDRFRKWHSCDPALLFQAPVRKFVPEDKLDIKRTLEEEARNCQWLVLWLDC 118

Query: 377  DREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVDARQE 556
            DREGENIAFEV++VCT  NR+L I RARFSALIDR+IH++VQ+L   N+ F+DAVDARQE
Sbjct: 119  DREGENIAFEVIDVCTSVNRHLTIKRARFSALIDRDIHHAVQNLDNANKYFADAVDARQE 178

Query: 557  IDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSHEPE 736
            IDLRIGASFTRFQTMLLRDAFV+D ATD+ N++LSYGPCQFPTLGFIVER+WE+QSHEPE
Sbjct: 179  IDLRIGASFTRFQTMLLRDAFVIDSATDDRNLVLSYGPCQFPTLGFIVERYWEIQSHEPE 238

Query: 737  EFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLKYPPH 916
            EFWTINC+H S+EGTATF WMRGHLFD+ CA IIYEMCV++P ATVT VRQQEK KYPP+
Sbjct: 239  EFWTINCSHRSDEGTATFGWMRGHLFDHACAVIIYEMCVEDPIATVTKVRQQEKPKYPPY 298

Query: 917  PLSTIELEKRASRYFRMSSEHTMKT----------------------------IVQEQQG 1012
            PL+TIELEKRASRYFRMSSEHTMK                             IVQEQQG
Sbjct: 299  PLNTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDGFSPRTDLHAIVQEQQG 358

Query: 1013 HPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYELVVR 1192
            HP WGSYAQRLLDP + LWRNP+ GGHDDKAHPPIHPTKFSAGES WS DH+++YELVVR
Sbjct: 359  HPGWGSYAQRLLDPASGLWRNPSSGGHDDKAHPPIHPTKFSAGESNWSQDHNRLYELVVR 418

Query: 1193 HFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQQ 1372
            HFLACVSQPA+GAETTVEIDIAGE FSASGRVI+AKNYLDVYRFE+WGGS++PTY  GQQ
Sbjct: 419  HFLACVSQPAVGAETTVEIDIAGEMFSASGRVILAKNYLDVYRFESWGGSLLPTYAVGQQ 478

Query: 1373 FTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSSMRF 1552
            F PTTLTLD+GVTRPPPLLSEADLL CMDK GIGTDATMHDHIKKLLDRFYATKD++ RF
Sbjct: 479  FMPTTLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRF 538

Query: 1553 SPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFVD 1732
            SPT LGEALVMGYDDMGY+LWKPYLRA+ME DMKAVS G K KAEVLE CLQQMK CF+D
Sbjct: 539  SPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQMKGCFLD 598

Query: 1733 ARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCL 1912
            AR NK KLFEAMAVFFERSNR   ++QH  GE +R+CGLCQE+DMVLRK  DGNFMVGC+
Sbjct: 599  ARQNKVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDGNFMVGCM 658

Query: 1913 GFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGGC 2092
            G+PQCRN +WLPGSVSEA+ TTNIC++C+PGPV+LIQF FRRLEIPPNY+ NHLGCIGGC
Sbjct: 659  GYPQCRNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEIPPNYSTNHLGCIGGC 718

Query: 2093 DDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSG---SYAN 2263
            D+ILRQL E+CGTGSR  S+                          Q+GHSSG   S ++
Sbjct: 719  DEILRQLTEICGTGSR--SAARGRGPTTSSNVQQNNTRQGACIYCHQSGHSSGDCPSQSS 776

Query: 2264 APESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWEDN 2443
             P S R R   +Q +GE S+ C++CGAPC LRTANT  NRGRKFY C +Q CNFFVWEDN
Sbjct: 777  GPRSVRPRTMNAQ-SGEISVSCTTCGAPCVLRTANTTQNRGRKFYKCPSQECNFFVWEDN 835

Query: 2444 ASSG--GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISGR-CFVCGD 2614
             S+G  G   + +                            F+SATG+P SGR CFVCGD
Sbjct: 836  VSNGNGGRGFQRANVSAGRGAGGRGSGGRGAQGAGHATGGTFVSATGDPNSGRRCFVCGD 895

Query: 2615 PGHFANACPNRG 2650
            P HFAN CPNRG
Sbjct: 896  PSHFANVCPNRG 907


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score = 1300 bits (3363), Expect = 0.0
 Identities = 636/913 (69%), Positives = 721/913 (78%), Gaps = 35/913 (3%)
 Frame = +2

Query: 17   LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 196
            ++ LNVAEKPSVAK+V+ ILS+      LRVRDGRSRYN+IFEFNY+I  QQ HM  TSV
Sbjct: 2    IKVLNVAEKPSVAKSVATILSRNQ----LRVRDGRSRYNKIFEFNYSINGQQCHMLVTSV 57

Query: 197  TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 376
            TGHLME++FEDR+RKWHSCDP DLY APV+KYVPEDK +I++TLEEEAR+C WL+LWLDC
Sbjct: 58   TGHLMEVEFEDRFRKWHSCDPADLYTAPVRKYVPEDKLDIKRTLEEEARRCHWLVLWLDC 117

Query: 377  DREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVDARQE 556
            DREGENIAFEV+EVC   NRNL I RARFSALI+R+IH + Q+L+ PNQ FSDAVDARQE
Sbjct: 118  DREGENIAFEVMEVCKGVNRNLTIRRARFSALIERDIHEAAQNLIAPNQWFSDAVDARQE 177

Query: 557  IDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSHEPE 736
            IDLRIGASFTRFQTMLLRD FV+D A D+ N++LSYGPCQFPTLGF+VER+WE+QSHEPE
Sbjct: 178  IDLRIGASFTRFQTMLLRDRFVIDSAQDDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPE 237

Query: 737  EFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVR-QQEKLKYPP 913
            EFWTINCTH S+EG A+FNWMRGHLFDYT + I+YEMCV+EPTATV+N   QQEKLKYPP
Sbjct: 238  EFWTINCTHRSDEGLASFNWMRGHLFDYTSSVILYEMCVEEPTATVSNRNHQQEKLKYPP 297

Query: 914  HPLSTIELEKRASRYFRMSSEHTMK----------------------------TIVQEQQ 1009
            +PLSTIELEKRASRYFRMSSE TMK                            TIVQE Q
Sbjct: 298  YPLSTIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDSFSSRTDLHTIVQEHQ 357

Query: 1010 GHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYELVV 1189
             HPVWGSYAQRLLDP A LWRNP+ GGHDDKAHPPIHPTKFSAGES WS DHH++YELVV
Sbjct: 358  EHPVWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESRWSQDHHRLYELVV 417

Query: 1190 RHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQ 1369
            RHFLACVSQPA+GAET VEIDIAGE+FSASGRVI+AKNYLDVYRFE+WG SMIPTY  GQ
Sbjct: 418  RHFLACVSQPAVGAETVVEIDIAGERFSASGRVILAKNYLDVYRFESWGDSMIPTYLQGQ 477

Query: 1370 QFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSSMR 1549
            QF P TLTLD+GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFY TKD++ R
Sbjct: 478  QFIPATLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANTR 537

Query: 1550 FSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFV 1729
            FSPT LGEALVMGYDDMGYELWKP LR++ME DMK VS+G K KAEVL  CLQQMKACF+
Sbjct: 538  FSPTNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLATCLQQMKACFL 597

Query: 1730 DARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGC 1909
            DA++NK KL EAMA+FF RS+RSN ++  A+GE VR CGLCQE++MVL+K  DGNFMVGC
Sbjct: 598  DAKVNKVKLLEAMAIFFNRSDRSNGDDSSALGENVRPCGLCQEANMVLKKNRDGNFMVGC 657

Query: 1910 LGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGG 2089
             GFPQCRN VWLPG V EA +T NIC++C+PGPVYLIQFKFR+LEIPP +NVNHLGCIGG
Sbjct: 658  SGFPQCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIPPGFNVNHLGCIGG 717

Query: 2090 CDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSYANAP 2269
            CD+ LRQL+E+CGTGSR                             +QTGH+S    +  
Sbjct: 718  CDETLRQLIEICGTGSRVQGG-NGPPTTTPSNPQRSNSRQAPCIYCYQTGHASTDCPSRI 776

Query: 2270 ESSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWEDN 2443
             ++R   S   +Q+ GESSIPCS+CG PC LRTANT  NRGRKFYSC +Q CNFFVWEDN
Sbjct: 777  SATRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANTANNRGRKFYSCSSQACNFFVWEDN 836

Query: 2444 ASSGG---TVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISG-RCFVCG 2611
             ++G    + PR ++                           F+SATGEPISG RCFVCG
Sbjct: 837  LNNGSAPRSAPRPNMSNSASNPSRRGGRGRGVQNAGRAADVTFVSATGEPISGRRCFVCG 896

Query: 2612 DPGHFANACPNRG 2650
            DP HFANACP+RG
Sbjct: 897  DPSHFANACPSRG 909


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score = 1288 bits (3333), Expect = 0.0
 Identities = 634/915 (69%), Positives = 719/915 (78%), Gaps = 32/915 (3%)
 Frame = +2

Query: 2    GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 181
            GGGRP+  LNVAEKPSVAK+V+GILSK     GLR+R+GRSRYN+I+EFNY+I+ Q  HM
Sbjct: 33   GGGRPINVLNVAEKPSVAKSVAGILSKNQ---GLRIREGRSRYNKIYEFNYSIRGQPCHM 89

Query: 182  SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 361
              TSVTGHLMELDF++RYRKWHSCDP DLYHAPV+K+VPEDK +I+KTLEEEAR+CQWL+
Sbjct: 90   LMTSVTGHLMELDFDERYRKWHSCDPADLYHAPVRKHVPEDKKDIKKTLEEEARRCQWLV 149

Query: 362  LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAV 541
            LWLDCDREGENIAFEV+EVC   N +L + RARFSALIDREIH +VQ+LV PNQ F+DAV
Sbjct: 150  LWLDCDREGENIAFEVIEVCRAVNCHLVLRRARFSALIDREIHQAVQNLVDPNQWFADAV 209

Query: 542  DARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQ 721
            DARQEIDLRIGASFTRFQTMLL++ F +D  TD+ N++LSYGPCQFPTLGF+VER+WE+Q
Sbjct: 210  DARQEIDLRIGASFTRFQTMLLKN-FHIDSVTDDRNLVLSYGPCQFPTLGFVVERYWEIQ 268

Query: 722  SHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKL 901
            +HE EEFWTINC+H SEEGTATF+WMRGHLFDYT A IIYEMCVQEPTATVT VRQQEKL
Sbjct: 269  AHESEEFWTINCSHKSEEGTATFSWMRGHLFDYTSAVIIYEMCVQEPTATVTKVRQQEKL 328

Query: 902  KYPPHPLSTIELEKRASRYFRMSSEHTMKT----------------------------IV 997
            KYPP+PLSTIELEKRASRYFRMSSEHTMK                             IV
Sbjct: 329  KYPPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSSGTNLHGIV 388

Query: 998  QEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVY 1177
            QEQ GHP WG YAQRLLD  A LWRNP  GGHDDKAHPPIHPTKFS+GES WS DH+K+Y
Sbjct: 389  QEQIGHPDWGPYAQRLLDHAAGLWRNPGSGGHDDKAHPPIHPTKFSSGESRWSQDHYKLY 448

Query: 1178 ELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTY 1357
            ELVVRHFLACVSQPA+GAET VEI+IAGE FS SGRVI+AKNYLDVYRFE+WGG +IPTY
Sbjct: 449  ELVVRHFLACVSQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIPTY 508

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
             +GQQF PTTLTLD+GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYA KD
Sbjct: 509  VHGQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKD 568

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
            ++ RF+PT +GEALVMGYDDMGYELWKP LR+MMESDMK VS+G K KA+VL  CLQQMK
Sbjct: 569  ANTRFAPTNIGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQMK 628

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
            ACF+DARL K KL EAM +FFE   RS   +Q A GEVVR+CG+CQES+MVL+K  DGN 
Sbjct: 629  ACFLDARLKKVKLLEAMGIFFE---RSGGEDQQAAGEVVRQCGICQESNMVLKKSRDGNL 685

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGCL FPQCRN VWLPGSVSEA VTTN C++C+PGPVYLIQFKFR+ EIPP +NVNHLG
Sbjct: 686  MVGCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNHLG 745

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSY 2257
            CIGGCD+ LRQL+E+CGTGSR  +                           Q GHSS   
Sbjct: 746  CIGGCDETLRQLIEICGTGSRIPAR-GRGPTASSNNGQQSNHRQRACIYCQQMGHSSSDC 804

Query: 2258 ANAPESSRG--RNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFV 2431
             +    SR    N  + ++GESSI C++CG PC LRTANT  NRGRKFYSC +Q CNFFV
Sbjct: 805  PSQFSGSRNARANGMNPQSGESSIQCTTCGTPCVLRTANTANNRGRKFYSCSSQECNFFV 864

Query: 2432 WEDNASSG-GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISG-RCFV 2605
            WED+A +G   +P+  +                           F+SATG+PISG RC+V
Sbjct: 865  WEDDAKNGTRRMPQAGVSGSASNPSQRGGRGRGGQSRGHNTGMTFVSATGDPISGRRCYV 924

Query: 2606 CGDPGHFANACPNRG 2650
            CG+P HFANACPNRG
Sbjct: 925  CGEPSHFANACPNRG 939


>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
          Length = 845

 Score = 1277 bits (3304), Expect = 0.0
 Identities = 617/845 (73%), Positives = 688/845 (81%), Gaps = 32/845 (3%)
 Frame = +2

Query: 17   LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 196
            ++ LNVAEKPSVAK+VSGILS+     GLRVRDGRSR+NRIFEFNY+++ Q  HM FTSV
Sbjct: 5    IKVLNVAEKPSVAKSVSGILSRNQ---GLRVRDGRSRFNRIFEFNYSVRGQPCHMLFTSV 61

Query: 197  TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 376
            TGHLMEL+FEDR+RKWHSCDP DLYHAPV+K+VPEDK +I++TLEEEAR+CQWL+LWLDC
Sbjct: 62   TGHLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDC 121

Query: 377  DREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVDARQE 556
            DREGENIAFEV++VC   N +L I RARFSALI+REIH++ Q+LV PN  FSDAVDARQE
Sbjct: 122  DREGENIAFEVIDVCRAVNCHLTIRRARFSALIEREIHHATQNLVDPNPWFSDAVDARQE 181

Query: 557  IDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSHEPE 736
            IDLRIGASFTRFQTM+LRD FV+D ATD+ N++LSYGPCQFPTLGF+VER+WEVQSHEPE
Sbjct: 182  IDLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEPE 241

Query: 737  EFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLKYPPH 916
            EFWTINC+H  +EG ATFNWMRGHLFD+TCA I+YEMCVQEP ATVT VR QEKLKYPP+
Sbjct: 242  EFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQEPNATVTKVRHQEKLKYPPY 301

Query: 917  PLSTIELEKRASRYFRMSSEHTMKT----------------------------IVQEQQG 1012
            PLSTIELEKRASRYFRMSSEHTMK                             IVQEQQ 
Sbjct: 302  PLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTDLHAIVQEQQD 361

Query: 1013 HPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYELVVR 1192
            HP WGSYAQRLLDP  SLWRNP+ GGHDDKAHPPIHPTKFSAGE  WS DH K+YELVVR
Sbjct: 362  HPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYELVVR 421

Query: 1193 HFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQQ 1372
            HFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYLDVYR+E+WGGSMIPTY  GQQ
Sbjct: 422  HFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQ 481

Query: 1373 FTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSSMRF 1552
            F PT+LTLD GVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDS+ RF
Sbjct: 482  FIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRF 541

Query: 1553 SPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFVD 1732
            SPTKLGEALVMGYDDMGYELWKP LR+MME DMK VS+G KRK EVL  CLQQMKACF+D
Sbjct: 542  SPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLD 601

Query: 1733 ARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCL 1912
            ARLNK KL EAMAVFFERSN+S  ++ H  GEVVR+CGLC+ES MVL+K  DGNFMVGCL
Sbjct: 602  ARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCL 661

Query: 1913 GFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGGC 2092
            GFPQCRN +WLPGSV EA VT+NIC +C+PGPVYLIQFKFR+LEIPP +N NHLGCIGGC
Sbjct: 662  GFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCIGGC 721

Query: 2093 DDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSYANAPE 2272
            DDILRQL+E+CGTGSR  S+                          QTGHSS    +   
Sbjct: 722  DDILRQLIEICGTGSR-MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFS 780

Query: 2273 SSRGRNSRSQE----AGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWED 2440
             SR   SR+       GE S+ CS+CG PC LRTANT  NRGRKFYSC +Q CNFF+WED
Sbjct: 781  GSRNSRSRTSSQNGMQGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWED 840

Query: 2441 NASSG 2455
              ++G
Sbjct: 841  EHNNG 845


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score = 1276 bits (3302), Expect = 0.0
 Identities = 628/931 (67%), Positives = 721/931 (77%), Gaps = 49/931 (5%)
 Frame = +2

Query: 5    GGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMS 184
            GGR +  LNVAEKPSVAK+V+ ILS+     GLRVRDGRSRYN+IFEFNY I+ Q  +M 
Sbjct: 3    GGRSITVLNVAEKPSVAKSVATILSRNQ---GLRVRDGRSRYNKIFEFNYAIRGQSCNMI 59

Query: 185  FTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLIL 364
             TSVTGHLMEL FE+RYRKWHSCDPV L+HAPV K+VPEDK +I++TLE+E+R+ QWL+L
Sbjct: 60   VTSVTGHLMELAFEERYRKWHSCDPVQLFHAPVHKFVPEDKLDIKRTLEQESRRAQWLVL 119

Query: 365  WLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVD 544
            WLDCDREGENIAFEVVEVCT  N +LNI RA FSALI+R+IH +VQ+LV+PN+ F+DAVD
Sbjct: 120  WLDCDREGENIAFEVVEVCTAVNHHLNIKRAHFSALIERDIHDAVQNLVQPNKWFADAVD 179

Query: 545  ARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQS 724
            ARQEIDLRIGASFTRFQT+LL+DAF +D  TD+ N++LSYGPCQFPTLGF+VER+WE+QS
Sbjct: 180  ARQEIDLRIGASFTRFQTLLLKDAFNIDSVTDDRNIVLSYGPCQFPTLGFVVERYWEIQS 239

Query: 725  HEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLK 904
            HEPEEFWTINC+HNS++G +TF+W RG+LFDYTCA + YEMCVQE TATV NVR+QE LK
Sbjct: 240  HEPEEFWTINCSHNSDDGISTFSWTRGNLFDYTCAVVFYEMCVQESTATVVNVRRQETLK 299

Query: 905  YPPHPLSTIELEKRASRYFRMSSEHTMKT----------------------------IVQ 1000
            YPPHPL+TIELEKRASRYFRMSSEHTMK                             IV+
Sbjct: 300  YPPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSQRTDLHGIVR 359

Query: 1001 EQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYE 1180
            EQQ H +WG+YAQRLLDPE+ LWRNP+GGGHDDKAHPPIHPTKFSAGE GWS DHH++YE
Sbjct: 360  EQQEHQIWGAYAQRLLDPESRLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHRLYE 419

Query: 1181 LVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRV-IIAKNYLDVYRFETWGGSMIPTY 1357
            LVVRHFLACVSQPA+GA TTVEIDIAGE FS S R   I +NYLDVYRFE+WGGS IPTY
Sbjct: 420  LVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSKRANSILRNYLDVYRFESWGGSTIPTY 479

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
              GQQF PTTLTLD+GVTRPPPLLSEADLLSCMDK GIGTDATMHDHIKKLLDRFYATKD
Sbjct: 480  VSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKD 539

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
            ++ RF+PT LGEALVMGYDDMGY LWKP LRA+ME +MKAVS GTKRK EVL +CLQQMK
Sbjct: 540  ANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQQMK 599

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
             CF+DAR+NK KL EAM VFFERSN S  +E  A+GEVV+ CGLCQ+SDMVL++  DGN+
Sbjct: 600  TCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRDGNY 659

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGCLGFPQCRNVVWLPGS++EA VT++ C+ C+PGPVYLIQFKFR+LEIPPNYN NHLG
Sbjct: 660  MVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNANHLG 719

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSY 2257
            C+GGCDDILRQL E+CGTGSR ++                           Q GHSS   
Sbjct: 720  CVGGCDDILRQLTEICGTGSRVSA---RGRGTSSSNVQRDNPGQSVCIFCQQVGHSSN-- 774

Query: 2258 ANAPESSRG-RNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVW 2434
             + P  S G R+++ +++GESS+ CSSCG+PC LRTANT  NRGRKFY CQ+Q CNFFVW
Sbjct: 775  -DCPSQSVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANNRGRKFYKCQSQECNFFVW 833

Query: 2435 EDNASSG--------------GTVPR----GSIXXXXXXXXXXXXXXXXXXXXXXXXXXX 2560
            EDN  +G              G+ P     G                             
Sbjct: 834  EDNVDNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGRGRGRDRDRDRGQGQIAAT 893

Query: 2561 FMSATGEPISG-RCFVCGDPGHFANACPNRG 2650
            F+SATGEPIS  RCFVCGDP HFAN CPNRG
Sbjct: 894  FVSATGEPISDRRCFVCGDPSHFANVCPNRG 924


>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
          Length = 813

 Score = 1258 bits (3256), Expect = 0.0
 Identities = 613/835 (73%), Positives = 668/835 (80%), Gaps = 52/835 (6%)
 Frame = +2

Query: 299  EDKSEIEKTLEEEARKCQWLILWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALID 478
            +DK++IEKTLE+EA +CQWLILWLDCDREGENIAFEVVEVCTRANRNLN+WRARFSALID
Sbjct: 1    QDKTDIEKTLEQEASRCQWLILWLDCDREGENIAFEVVEVCTRANRNLNVWRARFSALID 60

Query: 479  REIHYSVQHLVRPNQLFSDAVDARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVIL 658
            REIHY++QHL+RPNQLF+DAVD RQEIDLRIGASFTRFQTMLL+DAF+LDF TD+ +V+L
Sbjct: 61   REIHYAMQHLIRPNQLFADAVDVRQEIDLRIGASFTRFQTMLLKDAFLLDFRTDDRSVVL 120

Query: 659  SYGPCQFPTLGFIVERFWEVQSHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATII 838
            SYGPCQFPTLGF+VER+WE+QSHEPEEFW I CTH+SEEG  TFNWMRGHLFDYTCATI+
Sbjct: 121  SYGPCQFPTLGFVVERYWEIQSHEPEEFWGIGCTHSSEEGVTTFNWMRGHLFDYTCATIL 180

Query: 839  YEMCVQEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMK---------- 988
            YEMCVQEPTATVT+VRQQEKLKYPP+PLSTIELEKRASRYFRMSSE TMK          
Sbjct: 181  YEMCVQEPTATVTSVRQQEKLKYPPYPLSTIELEKRASRYFRMSSEQTMKVAEDLYQAGF 240

Query: 989  ------------------TIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPP 1114
                              TIVQEQQGHP WGSYAQRLLDPE  LW+NP  GGHDDKAHPP
Sbjct: 241  ISYPRTETDCFSERTDLRTIVQEQQGHPAWGSYAQRLLDPETGLWKNPGAGGHDDKAHPP 300

Query: 1115 IHPTKFSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVII 1294
            IHPTKFS+GESGWS DHHKVYELVVRHFLACVSQPAIGAETTVEIDIA EQFSASGR II
Sbjct: 301  IHPTKFSSGESGWSQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIASEQFSASGRAII 360

Query: 1295 AKNYLDVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIG 1474
            AKNYLDVYRFE WGGS+IP Y YGQQF PTTLTLD+GVTRPPPLLSEADLL CMDKAGIG
Sbjct: 361  AKNYLDVYRFEKWGGSLIPAYAYGQQFIPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIG 420

Query: 1475 TDATMHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMK 1654
            TDATMHDHIKKLLDR YATKDS+ RFSPTKLGEALVMGYDDMGYELWKP+LRAMMESDMK
Sbjct: 421  TDATMHDHIKKLLDRCYATKDSNTRFSPTKLGEALVMGYDDMGYELWKPHLRAMMESDMK 480

Query: 1655 AVSMGTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVV 1834
            +VSMGTKRK EVLEACLQQMKACF+DAR NK KLFEAM VFFERSNRS + +QH  G++V
Sbjct: 481  SVSMGTKRKGEVLEACLQQMKACFLDARANKEKLFEAMGVFFERSNRSQTADQHMSGDIV 540

Query: 1835 RKCGLCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVY 2014
            RKCGLCQESDMVLRKKPDGNFMVGCLG+PQCRNVVWLPGSVS A VTT +CSTCSPGPVY
Sbjct: 541  RKCGLCQESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPGSVSSASVTTVVCSTCSPGPVY 600

Query: 2015 LIQFKFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXX 2194
            +IQFKFR+LEIPPNYNV+HLGC+GGCD +LRQLVE+CGTGSR+NS+V             
Sbjct: 601  MIQFKFRQLEIPPNYNVDHLGCVGGCDSVLRQLVEICGTGSRSNSNVPGTG--------- 651

Query: 2195 XXXXXXXXXXXWQTGHSSGSYANAPESSRGRNSRSQE---------------------AG 2311
                          G +S S  N P+    RN  +                       AG
Sbjct: 652  -------------QGQTSSSSFNHPQHGNLRNRGAAHPTTTGRSSARHPSPSSTTHVGAG 698

Query: 2312 ESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWEDNASSGGT---VPRGSIX 2482
            ESS+PC SCGAPCNLRTANT ANRGR+FYSCQAQ CNFFVW+D+A SGG       G   
Sbjct: 699  ESSVPCGSCGAPCNLRTANTAANRGRQFYSCQAQSCNFFVWKDDAGSGGVRGGDGGGVSR 758

Query: 2483 XXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISGRCFVCGDPGHFANACPNR 2647
                                      F+SATGEP+SGRCF+CG+P HFAN CPNR
Sbjct: 759  RGGSSNQRGRGWGRRRHDEQRRATTSFVSATGEPVSGRCFLCGEPSHFANECPNR 813


>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 923

 Score = 1253 bits (3242), Expect = 0.0
 Identities = 608/927 (65%), Positives = 711/927 (76%), Gaps = 43/927 (4%)
 Frame = +2

Query: 2    GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 181
            GGG  +R LNVAEKPSVAK+V+ ILS+   SGG+R R+GRSRYNR+FEF Y+I  +  HM
Sbjct: 5    GGGGAIRVLNVAEKPSVAKSVAEILSRP--SGGMRSREGRSRYNRVFEFGYSIGGRACHM 62

Query: 182  SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 361
              TSVTGHLMEL+F+DR+R+WHSCDP DL+HAPV+K VP+DK +I++TLEEEAR CQWL+
Sbjct: 63   LVTSVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARNCQWLV 122

Query: 362  LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAV 541
            LWLDCDREGENIA+EV+++C+ AN  LNIWRARFSALIDREIH +VQHL RPN+LF+DAV
Sbjct: 123  LWLDCDREGENIAYEVIDICSGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAV 182

Query: 542  DARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQ 721
            DARQEIDLRIGASFTRFQTMLLRDAFVLD   D  N+ILSYGPCQFPTLGFIVERFWE+Q
Sbjct: 183  DARQEIDLRIGASFTRFQTMLLRDAFVLDDTGDERNMILSYGPCQFPTLGFIVERFWEIQ 242

Query: 722  SHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKL 901
            +HEPEEFWTINC+H S+EGTA+F W+RGHLFDY+ A +IYEMCV+EP ATV NVR QEKL
Sbjct: 243  AHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKL 302

Query: 902  KYPPHPLSTIELEKRASRYFRMSSEHTMK----------------------------TIV 997
            KYPP+PLSTIEL+KRASRYFRMSSEHTMK                            +IV
Sbjct: 303  KYPPYPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIV 362

Query: 998  QEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVY 1177
            QEQ  HPVWG+YAQRLLDPEA LWRNP+ GGHDDKAHPPIHPTKFSAGE+ WS +H K+Y
Sbjct: 363  QEQTAHPVWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWSDNHKKLY 422

Query: 1178 ELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTY 1357
            ELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV+++KNYLDVYRF++WGG+++PTY
Sbjct: 423  ELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLSKNYLDVYRFDSWGGTLLPTY 482

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
              GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMHDHIKKLLDR YATKD
Sbjct: 483  TIGQQFIPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKD 542

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
            ++ RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+GTK KAEVLE CLQQMK
Sbjct: 543  ANTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKAEVLENCLQQMK 602

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
            ACF+DAR NK KLF+AM  FF RS+R  +  Q++I E VR C  C ES+MVL+++P G F
Sbjct: 603  ACFLDARANKVKLFDAMGAFFARSSRPINETQNSI-EAVRPCAACNESEMVLKRRPTGEF 661

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGC GFPQCRNVVWLPGS+SEA VT  +C TC+PGPVY IQFKFRR +IPP+++V+HLG
Sbjct: 662  MVGCRGFPQCRNVVWLPGSLSEASVTDQVCPTCAPGPVYKIQFKFRRRDIPPSFDVDHLG 721

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQ------TG 2239
            CIGGCDDIL++L E+   GS N ++                         ++       G
Sbjct: 722  CIGGCDDILKELTEISRFGSHNQTATPARNQSQNPSGARQGAPRQDLHTDFRPARQFTNG 781

Query: 2240 HSSGSYANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGC 2419
            H+       P+  R  ++ S       + C+SCG PC LRTANT ANRGRKFY CQ   C
Sbjct: 782  HTP---VVNPQGFRSTHTGSSGNASGQVQCTSCGEPCILRTANTEANRGRKFYKCQDPAC 838

Query: 2420 NFFVWEDNASSGGTVPRG---------SIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSA 2572
             FF WED+  +  +VPRG                                      F++A
Sbjct: 839  GFFAWEDDVQN--SVPRGRGRGGRSGSRQASASAGRRGGSQARGRRGRGRNADGMMFVAA 896

Query: 2573 TGEPISGRCFVCGDPGHFANACPNRGR 2653
            TGEP+ G CFVCGDP HFANACP+RGR
Sbjct: 897  TGEPVHGSCFVCGDPTHFANACPSRGR 923


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score = 1235 bits (3196), Expect = 0.0
 Identities = 596/834 (71%), Positives = 678/834 (81%), Gaps = 30/834 (3%)
 Frame = +2

Query: 17   LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 196
            +  LNVAEKPSVAK+V+ ILS+    G LRVR+G+SRYN+IFEFNY I  Q  HM  TSV
Sbjct: 2    INVLNVAEKPSVAKSVATILSRNQQHG-LRVREGQSRYNKIFEFNYVINGQNCHMLVTSV 60

Query: 197  TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 376
            TGHLMEL+F+DR+RKWHSCDP DLYHAPV+K+VPEDK+ I++TLEEEAR+CQWLILWLDC
Sbjct: 61   TGHLMELEFDDRFRKWHSCDPADLYHAPVRKFVPEDKTNIKRTLEEEARRCQWLILWLDC 120

Query: 377  DREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVDARQE 556
            DREGENIAFEVV+VC  ANR L + RARFSALIDREIH + Q+LV PNQ FSDAVDARQE
Sbjct: 121  DREGENIAFEVVDVCRSANRYLTVRRARFSALIDREIHEAAQNLVSPNQWFSDAVDARQE 180

Query: 557  IDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSHEPE 736
            IDLRIGASFTRFQT+LLRD FV+D A D+ N++LSYGPCQFPTLGFIVER+WE+QSHE E
Sbjct: 181  IDLRIGASFTRFQTLLLRDKFVIDSAQDDRNLVLSYGPCQFPTLGFIVERYWEIQSHESE 240

Query: 737  EFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLKYPPH 916
            EFWTINC+H S EG A F+WMRGHLFDYT A I+YE+CV EPTATVT V+Q+EK KYPP+
Sbjct: 241  EFWTINCSHTSVEGIANFSWMRGHLFDYTSAVILYELCVLEPTATVTKVQQKEKQKYPPY 300

Query: 917  PLSTIELEKRASRYFRMSSEHTMK----------------------------TIVQEQQG 1012
            PLSTIELEKRASRYF MSSE TMK                            TIV++QQ 
Sbjct: 301  PLSTIELEKRASRYFHMSSEQTMKVAEDLYQSGFISYPRTETDGFSSRTDLHTIVRDQQA 360

Query: 1013 HPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYELVVR 1192
            HP+WGSYAQRLLDP   LWRNP+ GGHDDKAHPPIHPTKFS GE+GWS DHH+VYELVVR
Sbjct: 361  HPIWGSYAQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSPGETGWSQDHHRVYELVVR 420

Query: 1193 HFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQQ 1372
            HFLACVSQPA+GAETTVEIDIAGEQFSASGRVI+AKNYLDVYRFE+WGGSMIPTY +GQQ
Sbjct: 421  HFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWGGSMIPTYVHGQQ 480

Query: 1373 FTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSSMRF 1552
            F PTTLTLD+GVTRPPPLLSE+DLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD++ RF
Sbjct: 481  FMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRF 540

Query: 1553 SPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFVD 1732
            SPT LGEALVMGYDDMGYELWKP LR+MME DMK VSMG K KAEVLE CLQQMK CF+D
Sbjct: 541  SPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQQMKTCFLD 600

Query: 1733 ARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCL 1912
            AR+NK KL EAMAVFFERS+RS+ N+ HA  ++VR+CGLC+E++MVLR+  DGNFMVGC+
Sbjct: 601  ARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRRNRDGNFMVGCM 660

Query: 1913 GFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGGC 2092
            G+PQCRN +WLPG + EA VTT++C+ C+PGPVYLIQFKFR+LEIPP ++VNHLGCIGGC
Sbjct: 661  GYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGFSVNHLGCIGGC 720

Query: 2093 DDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSYANAPE 2272
            DD LRQL ++CGTGSR  +                           QTGH+S        
Sbjct: 721  DDTLRQLTDICGTGSRVQARARAPNTTPSNSQQSNTRFATCVHCH-QTGHASIDCPLQLS 779

Query: 2273 SSRGRNSR--SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFF 2428
             SR   SR  +++ GESS+ C +CG PC LRTANT  NRGRKFYSC +Q CNFF
Sbjct: 780  GSRRVQSRGTNEQMGESSVTCGTCGTPCALRTANTANNRGRKFYSCPSQSCNFF 833


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
            gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
            Japonica Group]
          Length = 928

 Score = 1233 bits (3189), Expect = 0.0
 Identities = 596/930 (64%), Positives = 705/930 (75%), Gaps = 46/930 (4%)
 Frame = +2

Query: 2    GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 181
            GGG  +R LNVAEKPSVAK+V+ ILS+   SGG+R R+GRSRYNR+FEF+Y+I  +  HM
Sbjct: 5    GGGGAIRVLNVAEKPSVAKSVAEILSRP--SGGMRSREGRSRYNRVFEFDYSIGGRACHM 62

Query: 182  SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 361
              TSVTGHLMEL+F+DR+R+WHSCDP DL+HAPV+K VP+DK +I++TLEEEARKCQWL+
Sbjct: 63   LVTSVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARKCQWLV 122

Query: 362  LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAV 541
            LWLDCDREGENIA+EV+++C  AN  LNIWRARFSALIDREIH +VQHL RPN+LF+DAV
Sbjct: 123  LWLDCDREGENIAYEVIDICAGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAV 182

Query: 542  DARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQ 721
            DARQEIDLRIGASFTRFQTMLL+DAFVLD   D+ N+ILSYGPCQFPTLGFIVERFWE+Q
Sbjct: 183  DARQEIDLRIGASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQ 242

Query: 722  SHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKL 901
            +HEPEEFWTINC+H S+EGTA+F W+RGHLFDY+ A +IYEMCV+EP ATV NVR QEKL
Sbjct: 243  AHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKL 302

Query: 902  KYPPHPLSTIELEKRASRYFRMSSEHTMK----------------------------TIV 997
            KYPP+PLSTIEL+KRASRYFRMSSEHTMK                            +IV
Sbjct: 303  KYPPYPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIV 362

Query: 998  QEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVY 1177
             EQ  HP WG+YAQRLLDPEA LWRNP+ GGHDDKAHPPIHPTKFSAGE+ W+ +H K+Y
Sbjct: 363  HEQVAHPNWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWTDNHKKLY 422

Query: 1178 ELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTY 1357
            ELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV++AKNYLDVYRF++WGG+++PTY
Sbjct: 423  ELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRFDSWGGTLLPTY 482

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
              GQQF PTTLTLD+G+TRPPPLL+EADLL CMDKAGIGTDATMHDHIKKLLDR YATKD
Sbjct: 483  IIGQQFVPTTLTLDSGMTRPPPLLAEADLLGCMDKAGIGTDATMHDHIKKLLDRCYATKD 542

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
            ++ RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+GTK K+EVLE CLQQMK
Sbjct: 543  ANTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKSEVLENCLQQMK 602

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
            ACF+DAR NK KLF+AM  FF RS+R  +  Q++I E VR C  C ES+M L+++P G F
Sbjct: 603  ACFLDARANKVKLFDAMGTFFARSSRPVNETQNSI-ETVRPCAACNESEMFLKQRPTGEF 661

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGC GFPQCRNVVWLP S+S A VT  +C TC+PGPVY IQFKFRR +IPPN++V+HLG
Sbjct: 662  MVGCRGFPQCRNVVWLPRSLSGAAVTDQVCPTCAPGPVYKIQFKFRRRDIPPNFDVDHLG 721

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSY 2257
            CIGGCDDIL++L+E+   GS + ++                         +   H +  +
Sbjct: 722  CIGGCDDILKELMELSRFGSHSQTATPARNQSQTASGVRQGSSRQDLHTSF---HPAVQF 778

Query: 2258 ANA------PESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGC 2419
             N       P+  R  +++S       + C+SC  PC LRTANT ANRGRKFY CQ   C
Sbjct: 779  TNGQTPVVNPQGFRSTHTQSSGNASGQVQCTSCREPCVLRTANTEANRGRKFYKCQNLAC 838

Query: 2420 NFFVWEDNASS------------GGTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXF 2563
             FF WED+  +            G +  R S                            F
Sbjct: 839  GFFAWEDDVENSAPRGRGGRGRGGRSSSRQSSASASAGRRGGTQGRGRRGRGRNADGMMF 898

Query: 2564 MSATGEPISGRCFVCGDPGHFANACPNRGR 2653
            ++ATGEP+ G CF+CGDP HFAN CPN GR
Sbjct: 899  VAATGEPVYGSCFICGDPTHFANVCPNLGR 928


>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
          Length = 885

 Score = 1231 bits (3186), Expect = 0.0
 Identities = 609/893 (68%), Positives = 703/893 (78%), Gaps = 15/893 (1%)
 Frame = +2

Query: 17   LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 196
            +  LNVAEKP VA+ V+ ILS+  +   +R+R+GRSRYN+IFEFNYTI+ Q  HM FTSV
Sbjct: 1    MNVLNVAEKPMVARTVATILSRNQN---MRMREGRSRYNKIFEFNYTIRGQPCHMIFTSV 57

Query: 197  TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 376
            TGHLMEL+F+DRYRKWHSCDP DL+ APV K+VPEDK +I++TLEEEAR+CQWLILWLDC
Sbjct: 58   TGHLMELEFDDRYRKWHSCDPADLFRAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDC 117

Query: 377  DREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVR-PNQLFSDAVDARQ 553
            D EGENIA+EV++VCT  N +L I RA FS LIDR+IH + Q+ +R P++  +DAVD RQ
Sbjct: 118  DVEGENIAYEVIDVCTAVNPHLTIKRAWFSTLIDRDIHNAAQNDLRDPDKRVADAVDVRQ 177

Query: 554  EIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSHEP 733
            EIDLRIGASFTRFQTML++DAF++D ATD+ N +LSYGPCQFPTLGF+VERFWE+Q+HEP
Sbjct: 178  EIDLRIGASFTRFQTMLMKDAFIIDTATDDRNRVLSYGPCQFPTLGFVVERFWEIQAHEP 237

Query: 734  EEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLKYPP 913
            EEFW+I C+H S+EGTA F+WMRG LFDYTCA IIYEMCV+EPTATVTN+RQQEK KYPP
Sbjct: 238  EEFWSIICSHESKEGTAEFSWMRGRLFDYTCAVIIYEMCVEEPTATVTNIRQQEKPKYPP 297

Query: 914  HPLSTIELEKRASRYFRMSSEHTMKTIVQEQQGHPVWGSYAQRLLDPEASLWRNPTGGGH 1093
             PL+TIEL+KRASRYFRMSS+HTMKTIVQEQQGHP WG YAQRL+DPEA LWRNP GGGH
Sbjct: 298  FPLNTIELQKRASRYFRMSSDHTMKTIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGGGH 357

Query: 1094 DDKAHPPIHPTKFSAGESGWSPDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFS 1273
            DDKAHPPI+PTKFS GESGWS DH K+YELVVRHFLACVS+PA+GAETTVEI+IAGE FS
Sbjct: 358  DDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHFLACVSKPALGAETTVEINIAGELFS 417

Query: 1274 ASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQQFTPTTLTLDAGVTRPPPLLSEADLLSC 1453
            A GRVI+ KNYLDVYR+E+WGGSMIPTY  GQQF PT LTL++GVTRPPPLLSEADLLS 
Sbjct: 418  ACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTKLTLESGVTRPPPLLSEADLLSY 477

Query: 1454 MDK--AGIGTDATMHDHIKKLLDRFYATKDSSMRFSPTKLGEALVMGYD--DMGYELWKP 1621
            MD+  A IGTDATM DHIKK+LDR YATKDSS RF+PT LGEALV+GYD  DM Y+LWKP
Sbjct: 478  MDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKP 537

Query: 1622 YLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFVDARLNKGKLFEAMAVFFERSNRSN 1801
             LR+ ME  M  V  G K KAEVL   LQ+M+ACF++ARLNK KL EAMA+FFERS RS+
Sbjct: 538  DLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLEARLNKVKLLEAMAIFFERSTRSS 597

Query: 1802 SNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCLGFPQCRNVVWLPGSVSEAIVTTN 1981
            S+E HA GEVVR+CGLCQESDM+LRK  DGNFMVGC+G+PQCRN VWLPGSVSEA+VTTN
Sbjct: 598  SDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTN 657

Query: 1982 ICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGGCDDILRQLVEVCGTGSRNNSSVXX 2161
             C+ C+PGPVYLIQFKFRRLEIPPNY+ NHLGCIGGCD+IL QL E+CG G R  +    
Sbjct: 658  TCNFCTPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDEILAQLTEICGRGPRMPARPRG 717

Query: 2162 XXXXXXXXXXXXXXXXXXXXXXWQTGHSSGS----YANAPESSRGRNSRSQEAGESSIPC 2329
                                   +TGHSS      Y N        +  S+  GE+S+ C
Sbjct: 718  PTAPTSNAHHTNPRQGACMNCR-ETGHSSTDCPLRYGNVQ-----HHGTSEHNGEASVSC 771

Query: 2330 SSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWED--NASSGG-TVPRGSI--XXXXX 2494
            SSCG PC LRTANT  NRGRKFYSCQ+Q CNFFVWED  NA +GG +V R +        
Sbjct: 772  SSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLNAGTGGRSVTRSNSIPALNPR 831

Query: 2495 XXXXXXXXXXXXXXXXXXXXXXFMSATGEPISG-RCFVCGDPGHFANACPNRG 2650
                                  FMSATG+PISG RC+ CGDP HFAN CP+RG
Sbjct: 832  QTGGRGSRGRGGQYGSRTANTTFMSATGDPISGRRCYTCGDPSHFANVCPHRG 884


>ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
          Length = 924

 Score = 1228 bits (3177), Expect = 0.0
 Identities = 599/929 (64%), Positives = 698/929 (75%), Gaps = 45/929 (4%)
 Frame = +2

Query: 2    GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 181
            GGG  +R LNVAEKPSVAK+V+ ILS+      ++ R GRSRYNRIFEFNY I  Q  HM
Sbjct: 6    GGGGAIRVLNVAEKPSVAKSVAEILSRR----AMQSRPGRSRYNRIFEFNYAIGGQACHM 61

Query: 182  SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 361
              TSVTGHLMELDF+DRYR+W+SCDPV+L+HAPV+K VP+DK +I++TLEEEAR CQWL+
Sbjct: 62   LVTSVTGHLMELDFDDRYRRWYSCDPVELFHAPVRKAVPQDKLDIKRTLEEEARTCQWLV 121

Query: 362  LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAV 541
            LWLDCDREGENIA+EVVE+C   N  LNIWRARFSALIDREIH +VQHL RPN+LF+DAV
Sbjct: 122  LWLDCDREGENIAYEVVEICAGVNHCLNIWRARFSALIDREIHEAVQHLGRPNKLFADAV 181

Query: 542  DARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQ 721
            DARQEIDLRIGASFTRFQTMLL+DAFVLD + +  N++LSYGPCQFPTLGFIVERFWE+Q
Sbjct: 182  DARQEIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQ 241

Query: 722  SHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKL 901
            +HEPEEFWTINC+H S+EGTA+F W+RGHLFDY+ A +IYEMCVQEP ATV NVR QEKL
Sbjct: 242  AHEPEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAIVIYEMCVQEPMATVQNVRNQEKL 301

Query: 902  KYPPHPLSTIELEKRASRYFRMSSEHTMKT----------------------------IV 997
            KYPP+PLST+EL+KRASR  RMSSEHTMK                             I 
Sbjct: 302  KYPPYPLSTLELQKRASRCCRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIA 361

Query: 998  QEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVY 1177
             EQ  HPVWGSYAQRLL+PE  LWRNP+ GGHDDKAHPPIHPTKF+AGES WS DHHKVY
Sbjct: 362  HEQVPHPVWGSYAQRLLNPEERLWRNPSNGGHDDKAHPPIHPTKFTAGESNWSQDHHKVY 421

Query: 1178 ELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTY 1357
            ELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV++AKNYLDVYR+++WGGS++PTY
Sbjct: 422  ELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRYDSWGGSLLPTY 481

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
              GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMH+HIKKLLDR YATKD
Sbjct: 482  TIGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHEHIKKLLDRCYATKD 541

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
            ++ RFSPT LGEALVMGYD+MGYELWKPYLRAMME+DMKAVS+GTK K EVLE CLQQMK
Sbjct: 542  ANSRFSPTNLGEALVMGYDEMGYELWKPYLRAMMEADMKAVSIGTKSKLEVLEGCLQQMK 601

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
            ACF+DAR NK KL +AM  FF RSNR  +  Q+ + EVVR CG C +S+M+L++KP+G F
Sbjct: 602  ACFLDARSNKVKLLDAMGTFFARSNRPLNETQNPM-EVVRPCGACNDSEMLLKRKPNGGF 660

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGC  FPQCRNVVWLPGS+SEA VT  IC TC PGPVY IQFKF R +IPPN++V+HLG
Sbjct: 661  MVGCRSFPQCRNVVWLPGSLSEAAVTEQICPTCVPGPVYKIQFKFNRRDIPPNFDVDHLG 720

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSY 2257
            CIGGCDD+L++L+E+    + N ++                         ++    +G +
Sbjct: 721  CIGGCDDVLKELIEITRFVNHNQTTTPARGQSQTPSGVRQGAPRQDLHPGFR---PAGQF 777

Query: 2258 ANA------PESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGC 2419
            AN       P+  R  ++++       + C++CG  C  RTANT ANRGRKFY CQ  GC
Sbjct: 778  ANGHTPVVNPQGFRSTHTQNSRNASGQVLCTTCGEACISRTANTEANRGRKFYKCQDSGC 837

Query: 2420 NFFVWEDNASSGGTVPRG-----------SIXXXXXXXXXXXXXXXXXXXXXXXXXXXFM 2566
             FF WED   +   VPRG           +                            F+
Sbjct: 838  GFFAWEDELEN--VVPRGRGRGGRGGGRQASASAGRRGGTQGRGRRGRGRNADANGMTFV 895

Query: 2567 SATGEPISGRCFVCGDPGHFANACPNRGR 2653
            SATG+ + G CF CGDP HFANACPNRGR
Sbjct: 896  SATGDTVHGCCFACGDPSHFANACPNRGR 924


>tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 915

 Score = 1225 bits (3169), Expect = 0.0
 Identities = 595/917 (64%), Positives = 698/917 (76%), Gaps = 36/917 (3%)
 Frame = +2

Query: 5    GGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMS 184
            GG  +R LNVAEKPSVAKAV+ ILS+  +      R GRS+YNRIFEFNY I  +  HM 
Sbjct: 5    GGGAIRVLNVAEKPSVAKAVAEILSRRSAQS----RAGRSQYNRIFEFNYAINGRACHML 60

Query: 185  FTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLIL 364
             TSVTGHLMEL+F+DR+R+WHSCDP +L+HAPV+K VP+DK  I++TLEEEAR+CQWL+L
Sbjct: 61   VTSVTGHLMELEFDDRFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVL 120

Query: 365  WLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVD 544
            WLDCDREGENIA+EV++VCTRAN +LNIWRARFSALIDREIH SVQHL RPN+LF+DAVD
Sbjct: 121  WLDCDREGENIAYEVIDVCTRANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAVD 180

Query: 545  ARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQS 724
            ARQEIDLRIGASFTRFQTMLL+DAFV+D   D  +++LSYGPCQFPTLGFIVERFWE+Q+
Sbjct: 181  ARQEIDLRIGASFTRFQTMLLKDAFVIDVTGDERSLVLSYGPCQFPTLGFIVERFWEIQA 240

Query: 725  HEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLK 904
            HEPEEFWTINCTH S+EGTA+F W+RGHLFDY+CA  IYEMCV EP ATV NVR QEKLK
Sbjct: 241  HEPEEFWTINCTHTSDEGTASFGWIRGHLFDYSCAISIYEMCVSEPMATVQNVRNQEKLK 300

Query: 905  YPPHPLSTIELEKRASRYFRMSSEHTMKT----------------------------IVQ 1000
            YPP+PLST+EL+KRASRYFRMSSEHTMK                             IV+
Sbjct: 301  YPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIVR 360

Query: 1001 EQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYE 1180
            EQ  HPVWG+YAQRLL+PEA LWRNP+ GGHDDKAHPPIHPTKFS GE  WSPDH ++YE
Sbjct: 361  EQVNHPVWGAYAQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEGERNWSPDHTRLYE 420

Query: 1181 LVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYN 1360
             VVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRVI+AKNYLDVYRF++WGG+++PTYN
Sbjct: 421  FVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFDSWGGTLLPTYN 480

Query: 1361 YGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDS 1540
             GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMHDHIKKLLDR YATKD 
Sbjct: 481  IGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDE 540

Query: 1541 SMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKA 1720
            + RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+GTK K+EVLE+CLQQMKA
Sbjct: 541  NTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSVGTKSKSEVLESCLQQMKA 600

Query: 1721 CFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFM 1900
            CF+DAR+ K KL +AM  FF RSNR  +  Q+ + EVVR CG C  S+M+L+++  G FM
Sbjct: 601  CFLDARVKKAKLLDAMGTFFARSNRPINETQNPV-EVVRPCGACNGSEMLLKRRASGEFM 659

Query: 1901 VGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGC 2080
            VGC  +PQCRNVVWLPGS+SEA VT  +C  C+PGPVY IQFKFRR +IPPN++V+HLGC
Sbjct: 660  VGCRSYPQCRNVVWLPGSLSEAAVTNQVCPICAPGPVYKIQFKFRRRDIPPNFDVDHLGC 719

Query: 2081 IGGCDDILRQLVEVCGTGSRNNSSV----XXXXXXXXXXXXXXXXXXXXXXXXWQTGHSS 2248
            +GGCDDIL+ L+E+   GSR+ ++                                 + S
Sbjct: 720  VGGCDDILKDLMEISRFGSRSQAATPARGPTPNGVGQGTPRQDLHTIFRPASQLNNDNPS 779

Query: 2249 GSYANAPESSRGRN-SRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNF 2425
              ++    S+  +N S + +AG+  + C+SCGA C  R ANT ANRGR+FY CQ  GC F
Sbjct: 780  VMHSQGFRSTHTQNPSNASDAGQ--VLCTSCGALCISRIANTEANRGRRFYKCQDPGCGF 837

Query: 2426 FVWEDNASSG---GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISGR 2596
            F WED   +G   G   RGS                            F+SATG+ + G 
Sbjct: 838  FKWEDEVDNGTGRGRRGRGSSRQASASASAGRRGGGRRGRGRNADGGMFVSATGDTVLGC 897

Query: 2597 CFVCGDPGHFANACPNR 2647
            CF CGDP HFANACPNR
Sbjct: 898  CFNCGDPSHFANACPNR 914


>ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
            gi|548834342|gb|ERM96738.1| hypothetical protein
            AMTR_s00202p00033660 [Amborella trichopoda]
          Length = 988

 Score = 1224 bits (3167), Expect = 0.0
 Identities = 596/918 (64%), Positives = 702/918 (76%), Gaps = 40/918 (4%)
 Frame = +2

Query: 17   LRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHMSFTSV 196
            +R LNVAEKPSVAKAV+GILS+    G LRVR+GRSRYN+++EF + I+ Q+ HM FTSV
Sbjct: 81   IRVLNVAEKPSVAKAVAGILSQ----GRLRVREGRSRYNKVYEFEHAIRGQRCHMLFTSV 136

Query: 197  TGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLILWLDC 376
            TGHLME+ F +RY+KWHSCDP DL+ AP++K+VP+DK +I++TLEEEAR CQWL+LWLDC
Sbjct: 137  TGHLMEIVFHERYKKWHSCDPADLFSAPIQKHVPQDKLDIKRTLEEEARTCQWLVLWLDC 196

Query: 377  DREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAVDARQE 556
            DREGENIAFEVVEVCT ANRNL+IWRA FSALIDREI ++VQ+L RPNQLFSDAVDARQE
Sbjct: 197  DREGENIAFEVVEVCTTANRNLDIWRAHFSALIDREIRHAVQNLGRPNQLFSDAVDARQE 256

Query: 557  IDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQSHEPE 736
            IDLRIGASFTRFQTMLL++AFVL+ + D+ NVI+SYGPCQFPTLGF+VER+WE+Q+HEPE
Sbjct: 257  IDLRIGASFTRFQTMLLKNAFVLNISDDDKNVIVSYGPCQFPTLGFVVERYWEIQAHEPE 316

Query: 737  EFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKLKYPPH 916
            EFWTINC+H ++EG ATFNW RGHLFDY+CA IIYEMCV+EPTATV  V  QE+ KYPPH
Sbjct: 317  EFWTINCSHKTDEGIATFNWTRGHLFDYSCALIIYEMCVEEPTATVKKVSHQERRKYPPH 376

Query: 917  PLSTIELEKRASRYFRMSSEHTMKT----------------------------IVQEQQG 1012
            PLST+EL+KRAS+YFRMSSEHTMK                             +V+EQQG
Sbjct: 377  PLSTLELQKRASQYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSPNTDLQALVREQQG 436

Query: 1013 HPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVYELVVR 1192
            HP WGSYAQRLL PE  LWRNP+ GGHDDKAHPPIHPTKFSAGES WSPDHH++YELVVR
Sbjct: 437  HPEWGSYAQRLLSPEG-LWRNPSSGGHDDKAHPPIHPTKFSAGESSWSPDHHRLYELVVR 495

Query: 1193 HFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTYNYGQQ 1372
            HFLACVSQPAIGA TTVEIDIAGE F ASG +II KNYL+VYRFE+WGGS IPTY +GQQ
Sbjct: 496  HFLACVSQPAIGAGTTVEIDIAGEVFVASGLMIIEKNYLEVYRFESWGGSTIPTYAFGQQ 555

Query: 1373 FTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSSMRF 1552
            F PT LTLD+ VTRPPPLLSE+DLLSCMDKAGIGTDATMHDHIKKLLDRFYA KDS+ RF
Sbjct: 556  FIPTRLTLDSSVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRF 615

Query: 1553 SPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMKACFVD 1732
            SPT LGEALVMGYD MG++LWKP LR+ MESDMKAVS G K K+EVL +CLQQMK CF+D
Sbjct: 616  SPTTLGEALVMGYDCMGWDLWKPNLRSAMESDMKAVSEGRKTKSEVLASCLQQMKDCFLD 675

Query: 1733 ARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCL 1912
             + +K KLFE M +FFERSN    +  H  G  VR C  CQES+MVLR++PDG+FMVGCL
Sbjct: 676  VKSHKAKLFETMGIFFERSNTPGGDNLHLAGGKVRSCQQCQESEMVLRRRPDGSFMVGCL 735

Query: 1913 GFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLGCIGGC 2092
             FP CRNVVWLPG++SEA+VT ++C+ C+P PV+ IQFKFRR+EIPPN++  HLGCIGGC
Sbjct: 736  RFPLCRNVVWLPGAISEALVTEHVCNVCNPEPVFKIQFKFRRMEIPPNFDTEHLGCIGGC 795

Query: 2093 DDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXW----QTGHSSGSYA 2260
            D+ LR+L+++CGTG RN SS                              Q+GHSS    
Sbjct: 796  DETLRELIQICGTGPRNLSSGSGTRGRQPTQFSGSAQRRNTSQVVCARCRQSGHSSN--- 852

Query: 2261 NAPESSRGRNSR-----SQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNF 2425
            + P+ SR ++++     +  +G + + C SC  PC +RTANT  NRGR+FY C  Q CNF
Sbjct: 853  DCPQISRSQDAQRPGHGNSNSGGADVLCESCQMPCTVRTANTENNRGRRFYKCDRQECNF 912

Query: 2426 FVWEDNASSGGTVPRGS--IXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISGR- 2596
            F+WED   SG    RG+  +                           F++ATGEP+S R 
Sbjct: 913  FIWEDAIGSGN---RGASRVNGNRSSVRGGQAGRGRGRRGARSGAATFVTATGEPVSDRR 969

Query: 2597 CFVCGDPGHFANACPNRG 2650
            CF CGDP HFAN CPNRG
Sbjct: 970  CFSCGDPSHFANVCPNRG 987


>ref|XP_002465810.1| hypothetical protein SORBIDRAFT_01g046210 [Sorghum bicolor]
            gi|241919664|gb|EER92808.1| hypothetical protein
            SORBIDRAFT_01g046210 [Sorghum bicolor]
          Length = 860

 Score = 1222 bits (3163), Expect = 0.0
 Identities = 594/913 (65%), Positives = 689/913 (75%), Gaps = 31/913 (3%)
 Frame = +2

Query: 2    GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 181
            GGG  +R LNVAEKPSVAKAV+ ILS+      ++ R GRS+YNRIFEFNY I  +  HM
Sbjct: 4    GGGGAIRVLNVAEKPSVAKAVAEILSRR----SMQSRAGRSQYNRIFEFNYAINGRACHM 59

Query: 182  SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 361
              TSVTGHLMEL+F++R+R+WHSCDP +L+HAPV+K VP+DK  I++TLEEEAR+CQWL+
Sbjct: 60   LVTSVTGHLMELEFDERFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLV 119

Query: 362  LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAV 541
            LWLDCDREGENIA+EV++VCT AN +LNIWRARFSALIDREIH SVQHL RPN+LF+DAV
Sbjct: 120  LWLDCDREGENIAYEVIDVCTGANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAV 179

Query: 542  DARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQ 721
            DARQEIDLRIGASFTRFQTMLL+DAFV++   D+ N++LSYGPCQFPTLGFIVERFWE+Q
Sbjct: 180  DARQEIDLRIGASFTRFQTMLLKDAFVINVTGDDRNLVLSYGPCQFPTLGFIVERFWEIQ 239

Query: 722  SHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKL 901
            +HEPEEFWTINCTH S+EGTA+F W+RGHLFDY+CA  IYEMCV EP ATV NVR QEKL
Sbjct: 240  AHEPEEFWTINCTHTSDEGTASFGWIRGHLFDYSCAISIYEMCVSEPMATVQNVRNQEKL 299

Query: 902  KYPPHPLSTIELEKRASRYFRMSSEHTMKT----------------------------IV 997
            KYPP+PLST+EL+KRASRYFRMSSEHTMK                             IV
Sbjct: 300  KYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIV 359

Query: 998  QEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVY 1177
            +EQ  HPVWG+YAQRLL+PEA LWRNP+ GGHDDKAHPPIHPTKFS GE  WSPDH ++Y
Sbjct: 360  REQVNHPVWGAYAQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEGERNWSPDHIRLY 419

Query: 1178 ELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTY 1357
            ELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRVI+AKNYLDVYRF++WGG+++PTY
Sbjct: 420  ELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFDSWGGTLLPTY 479

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
            N GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMHDHIKKLLDR YATKD
Sbjct: 480  NIGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKD 539

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
             + RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VSMGTK K+EVLE+CLQQMK
Sbjct: 540  ENTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSMGTKSKSEVLESCLQQMK 599

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
            ACF+DAR+NK KL +AM  FF RSNR  +  Q+ + EVVR CG C  S+MVL+++  G F
Sbjct: 600  ACFLDARVNKAKLLDAMGTFFARSNRPINETQNPV-EVVRPCGACNGSEMVLKRRVTGEF 658

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGC  +PQCRNVVWLPGS+SEA VT  +C  C+PGPVY IQFKFRR +IPPN++V+HLG
Sbjct: 659  MVGCRSYPQCRNVVWLPGSLSEAAVTNQVCPICAPGPVYKIQFKFRRRDIPPNFDVDHLG 718

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSY 2257
            C+GGCDDIL++L+E+   GSR+ +                                    
Sbjct: 719  CVGGCDDILKELMELSRFGSRSQA------------------------------------ 742

Query: 2258 ANAPESSRGRNSRSQEAGESSIPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNFFVWE 2437
                            A    + C+SCGA C   TANT ANRGRKFY CQ  GC FF WE
Sbjct: 743  ----------------ATPGQVLCTSCGAACISLTANTEANRGRKFYKCQDPGCGFFKWE 786

Query: 2438 DNASSG---GTVPRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPISGRCFVC 2608
            D   +G   G   RGS                            F+SATG+ + G CF C
Sbjct: 787  DELDNGTGRGRRGRGSSRQATASASAGRRGGGRRGRGRNADGGMFVSATGDTVPGCCFTC 846

Query: 2609 GDPGHFANACPNR 2647
            GDP HFANACPNR
Sbjct: 847  GDPSHFANACPNR 859


>ref|XP_004985595.1| PREDICTED: DNA topoisomerase 3-alpha-like [Setaria italica]
          Length = 917

 Score = 1221 bits (3159), Expect = 0.0
 Identities = 598/919 (65%), Positives = 699/919 (76%), Gaps = 37/919 (4%)
 Frame = +2

Query: 2    GGGRPLRALNVAEKPSVAKAVSGILSKTPSSGGLRVRDGRSRYNRIFEFNYTIQNQQVHM 181
            GGG  +R LNVAEKPSVAKAV+ ILS+    G ++ R GRS YNR+FEFNY I  +   M
Sbjct: 5    GGGGAIRVLNVAEKPSVAKAVAEILSR----GSMQSRAGRSPYNRVFEFNYAINGRACRM 60

Query: 182  SFTSVTGHLMELDFEDRYRKWHSCDPVDLYHAPVKKYVPEDKSEIEKTLEEEARKCQWLI 361
              TSVTGHLMEL+F+DR+R+WHSCDP DL+HAPV+K VP+DK  I++TLEEEAR+CQWL+
Sbjct: 61   LVTSVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQAIKQTLEEEARRCQWLV 120

Query: 362  LWLDCDREGENIAFEVVEVCTRANRNLNIWRARFSALIDREIHYSVQHLVRPNQLFSDAV 541
            LWLDCDREGENIA+EV+EVCT AN +LNIWRARFSALIDREIH SVQHL RPN+LF+DAV
Sbjct: 121  LWLDCDREGENIAYEVIEVCTGANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAV 180

Query: 542  DARQEIDLRIGASFTRFQTMLLRDAFVLDFATDNTNVILSYGPCQFPTLGFIVERFWEVQ 721
            DARQEIDLRIGASFTRFQTMLL+DAFV+D   D+ N++LSYGPCQFPTLGFIVERFWE+Q
Sbjct: 181  DARQEIDLRIGASFTRFQTMLLKDAFVIDVTGDDRNLVLSYGPCQFPTLGFIVERFWEIQ 240

Query: 722  SHEPEEFWTINCTHNSEEGTATFNWMRGHLFDYTCATIIYEMCVQEPTATVTNVRQQEKL 901
            +HEPEEFWTINCTH S+EGTA+F W+RGHLFDY  A I+YEMCV+EP ATV NVR QEKL
Sbjct: 241  AHEPEEFWTINCTHTSDEGTASFGWIRGHLFDYPSAVILYEMCVEEPMATVQNVRNQEKL 300

Query: 902  KYPPHPLSTIELEKRASRYFRMSSEHTMKT----------------------------IV 997
            KYPP+PLST+EL+KRASRYFRMSSEHTMK                             IV
Sbjct: 301  KYPPYPLSTLELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIV 360

Query: 998  QEQQGHPVWGSYAQRLLDPEASLWRNPTGGGHDDKAHPPIHPTKFSAGESGWSPDHHKVY 1177
            +EQ  HPVWG+YA RLL PE  LWRNP+ GGHDDKAHPPIHPTKFS GE+ WSPDH+++Y
Sbjct: 361  REQVEHPVWGAYAHRLLTPEERLWRNPSNGGHDDKAHPPIHPTKFSRGENNWSPDHNRLY 420

Query: 1178 ELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSMIPTY 1357
            ELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV++AKNYLDVYRF++WGG+++PTY
Sbjct: 421  ELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRFDSWGGTLLPTY 480

Query: 1358 NYGQQFTPTTLTLDAGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKD 1537
            N GQQF PTTLTLD+GVTRPPPLL+EADLLSCMDKAGIGTDATMHDHIKKLLDR YATKD
Sbjct: 481  NIGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKD 540

Query: 1538 SSMRFSPTKLGEALVMGYDDMGYELWKPYLRAMMESDMKAVSMGTKRKAEVLEACLQQMK 1717
             + RFSPT LGEALVMGYD+MGYELWKPYLR+MME+DMK+VS+GTK K++VLE+CLQQMK
Sbjct: 541  ENTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKSQVLESCLQQMK 600

Query: 1718 ACFVDARLNKGKLFEAMAVFFERSNRSNSNEQHAIGEVVRKCGLCQESDMVLRKKPDGNF 1897
            ACF+DAR+NK KL +AM  FF RSNR  +  Q+ I EVVR C  C+ES+MVL++K +G F
Sbjct: 601  ACFLDARVNKAKLLDAMGTFFARSNRPVNETQNPI-EVVRPCAACRESEMVLKQKQNGEF 659

Query: 1898 MVGCLGFPQCRNVVWLPGSVSEAIVTTNICSTCSPGPVYLIQFKFRRLEIPPNYNVNHLG 2077
            MVGC  +PQCRNVVWLPGS+SEA VT  +C  C+PGPVY IQFKFRR +IPPN++V+HLG
Sbjct: 660  MVGCRSYPQCRNVVWLPGSLSEASVTNQVCPICTPGPVYKIQFKFRRRDIPPNFDVDHLG 719

Query: 2078 CIGGCDDILRQLVEVCGTGSRNNSSVXXXXXXXXXXXXXXXXXXXXXXXXWQTGHSSGSY 2257
            CIGGCDDIL++L E+   GSR+ ++                            G  +   
Sbjct: 720  CIGGCDDILKELTEISRFGSRSQAATPARGQTPNGVRQGPPRQDLHTNFR-PAGQLNNEN 778

Query: 2258 ANAPESSRGRNSRSQEAGESS----IPCSSCGAPCNLRTANTPANRGRKFYSCQAQGCNF 2425
             +   S   R++ +Q    +S    + C+SCG  C  R ANT ANRGRKFY C+  GC F
Sbjct: 779  PSVMHSQGFRSTHTQNQSNTSDAGQVLCTSCGELCISRIANTEANRGRKFYKCEDPGCGF 838

Query: 2426 FVWE---DNASSGGTVPRGSI--XXXXXXXXXXXXXXXXXXXXXXXXXXXFMSATGEPIS 2590
            F WE   DNA+  G   RGS                              F+SATG+P S
Sbjct: 839  FKWEDELDNATPRGRRGRGSSRQAPASAGRRGGAQARGRRGRGRNTDGGMFVSATGDP-S 897

Query: 2591 GRCFVCGDPGHFANACPNR 2647
              CF CGDP HFANACPNR
Sbjct: 898  RCCFTCGDPSHFANACPNR 916