BLASTX nr result

ID: Rehmannia24_contig00014896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00014896
         (622 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago ...    40   4e-06
gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]     40   8e-06

>ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago truncatula]
           gi|355504530|gb|AES85733.1| hypothetical protein
           MTR_137s0043 [Medicago truncatula]
          Length = 372

 Score = 39.7 bits (91), Expect(3) = 4e-06
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -1

Query: 172 NNRITCTLWEDYMDTILPYLEDH-GFQPIIVILQMCRAKIFRG 47
           NNR+ C+LW ++ D I+ +  +H    P I+ILQ C+ +++ G
Sbjct: 153 NNRLHCSLWGEHADKIVTFFGNHDNDTPTILILQFCKTRMYLG 195



 Score = 34.7 bits (78), Expect(3) = 4e-06
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -3

Query: 347 TDIIGKVVSMQSAQTKEIGGRTIRFIDITLEDLE 246
           TD+IG V+     +  E  GR  R ID+TLEDLE
Sbjct: 119 TDVIGHVIERGDIRETEKDGRKNRVIDLTLEDLE 152



 Score = 21.6 bits (44), Expect(3) = 4e-06
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -1

Query: 589 YKTVTGKYKILFHGKTNVFEMFDKAFPKFMYVLKDFKEL--ARVENVDETML 440
           YK  + K+K+     +   ++   A P  ++  K F E+  + VE V   ++
Sbjct: 71  YKVTSHKHKLSMMHNSTFTKVHSPAIPMNVFEFKPFNEILSSTVEEVSTDVI 122


>gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]
          Length = 327

 Score = 40.4 bits (93), Expect(2) = 8e-06
 Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -1

Query: 172 NNRITCTLWEDYMDTILPYLEDH-GFQPIIVILQMCRAKIFRG 47
           NNR+ C+LW +++D I+ +  +H    P I+ILQ C+ +++ G
Sbjct: 173 NNRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRMYLG 215



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = -3

Query: 347 TDIIGKVVSMQSAQTKEIGGRTIRFIDITLEDLE 246
           TD+IG V+   + +  E  GR  R ID+TLEDLE
Sbjct: 139 TDVIGHVIERGNIRETEKDGRKSRVIDLTLEDLE 172


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