BLASTX nr result

ID: Rehmannia24_contig00013433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00013433
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362840.1| PREDICTED: putative late blight resistance p...    67   3e-09
ref|XP_004251396.1| PREDICTED: putative late blight resistance p...    64   2e-08
gb|AET22504.1| hypothetical protein [Solanum lycopersicum] gi|35...    64   2e-08
gb|AET22503.1| hypothetical protein [Solanum lycopersicum]             64   2e-08
ref|XP_004234046.1| PREDICTED: putative late blight resistance p...    57   2e-06
ref|XP_004252037.1| PREDICTED: putative late blight resistance p...    57   3e-06
ref|XP_006367921.1| PREDICTED: putative late blight resistance p...    55   1e-05

>ref|XP_006362840.1| PREDICTED: putative late blight resistance protein homolog
           R1B-17-like [Solanum tuberosum]
          Length = 876

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 43/103 (41%), Positives = 59/103 (57%)
 Frame = +1

Query: 97  CFVNRGSSLGSLGNFRLLRVLDVVNANFSLFWFHDSFVSPPDALFELIHLRYLAFYYDSD 276
           C V   S  G +G F+LLRVLDVVN +F  F  H         + +L+HLRYLA   +S+
Sbjct: 535 CSVLEDSYFGCMG-FKLLRVLDVVNYSFYGFPIH---------VIKLVHLRYLALSINSE 584

Query: 277 IPSAISKLRNLQTLIIHPVEASRNFGPARVYFTFLDLPQLRHL 405
           +P +ISKL+NLQTLII+         P  ++     +P LRH+
Sbjct: 585 LPRSISKLKNLQTLIIYWGTKEMRILPLEIW----KMPILRHI 623


>ref|XP_004251396.1| PREDICTED: putative late blight resistance protein homolog
           R1A-10-like [Solanum lycopersicum]
          Length = 869

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/103 (40%), Positives = 59/103 (57%)
 Frame = +1

Query: 97  CFVNRGSSLGSLGNFRLLRVLDVVNANFSLFWFHDSFVSPPDALFELIHLRYLAFYYDSD 276
           C V   S  G +G F+LLRVLDVVN +F  F  H         + +L+HLRYLA   +S+
Sbjct: 530 CSVLEDSYFGCIG-FKLLRVLDVVNYSFYGFPIH---------VIKLVHLRYLALSINSE 579

Query: 277 IPSAISKLRNLQTLIIHPVEASRNFGPARVYFTFLDLPQLRHL 405
           +P +ISKL++LQTLII+         P  ++     +P LRH+
Sbjct: 580 LPRSISKLKSLQTLIIYWGTKEMRILPLELW----KMPILRHI 618


>gb|AET22504.1| hypothetical protein [Solanum lycopersicum]
           gi|356600308|gb|AET22505.1| hypothetical protein
           [Solanum pimpinellifolium]
          Length = 886

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/103 (40%), Positives = 59/103 (57%)
 Frame = +1

Query: 97  CFVNRGSSLGSLGNFRLLRVLDVVNANFSLFWFHDSFVSPPDALFELIHLRYLAFYYDSD 276
           C V   S  G +G F+LLRVLDVVN +F  F  H         + +L+HLRYLA   +S+
Sbjct: 547 CSVLEDSYFGCMG-FKLLRVLDVVNYSFYGFPIH---------VIKLVHLRYLALSINSE 596

Query: 277 IPSAISKLRNLQTLIIHPVEASRNFGPARVYFTFLDLPQLRHL 405
           +P +ISKL++LQTLII+         P  ++     +P LRH+
Sbjct: 597 LPRSISKLKSLQTLIIYWGTKEMRILPLELW----KMPILRHI 635


>gb|AET22503.1| hypothetical protein [Solanum lycopersicum]
          Length = 888

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/103 (40%), Positives = 59/103 (57%)
 Frame = +1

Query: 97  CFVNRGSSLGSLGNFRLLRVLDVVNANFSLFWFHDSFVSPPDALFELIHLRYLAFYYDSD 276
           C V   S  G +G F+LLRVLDVVN +F  F  H         + +L+HLRYLA   +S+
Sbjct: 549 CSVLEDSYFGCIG-FKLLRVLDVVNYSFYGFPIH---------VIKLVHLRYLALSINSE 598

Query: 277 IPSAISKLRNLQTLIIHPVEASRNFGPARVYFTFLDLPQLRHL 405
           +P +ISKL++LQTLII+         P  ++     +P LRH+
Sbjct: 599 LPRSISKLKSLQTLIIYWGTKEMRILPLELW----KMPILRHI 637


>ref|XP_004234046.1| PREDICTED: putative late blight resistance protein homolog
           R1B-14-like [Solanum lycopersicum]
          Length = 866

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
 Frame = +1

Query: 22  RRLSIAHSDLNCL-TNIYGSTIRTIICFVNRGSSLGSL------GNFRLLRVLDVVNANF 180
           RRLSI  S    + TN YG  IR+ +CF +R  ++          +F LLRVLD+ +  F
Sbjct: 511 RRLSIDSSVQEFISTNPYGDGIRSFLCFSSRNIAMSPYELETIPKSFPLLRVLDIESILF 570

Query: 181 SLFWFHDSFVSPPDALFELIHLRYLAFYYDS--DIPSAISKLRNLQTLIIHPVEASRNFG 354
            L     S        F+L HLRYLA   DS   +P  +  L NLQTLII   + + N  
Sbjct: 571 ELETIRKSPFR--KQFFQLYHLRYLAISSDSLKILPKFMEDLWNLQTLIISTQQETLN-- 626

Query: 355 PARVYFTFLDLPQLRHL 405
              +     ++P LRH+
Sbjct: 627 ---IEADICNMPHLRHV 640


>ref|XP_004252037.1| PREDICTED: putative late blight resistance protein homolog
           R1B-16-like [Solanum lycopersicum]
          Length = 934

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/97 (36%), Positives = 55/97 (56%)
 Frame = +1

Query: 115 SSLGSLGNFRLLRVLDVVNANFSLFWFHDSFVSPPDALFELIHLRYLAFYYDSDIPSAIS 294
           S + S  +F+LLRVLD+++ NF        F   P  + +L++LRYLA    S+ P  +S
Sbjct: 574 SPIFSFMDFKLLRVLDILDINFQ------HFPQFPSEIMQLVNLRYLALATSSEFPPTVS 627

Query: 295 KLRNLQTLIIHPVEASRNFGPARVYFTFLDLPQLRHL 405
           +  +LQTLI+H V +  +  P  ++     +P LRHL
Sbjct: 628 QFWSLQTLILH-VYSRNSTLPREIW----KMPNLRHL 659


>ref|XP_006367921.1| PREDICTED: putative late blight resistance protein homolog
           R1A-10-like isoform X6 [Solanum tuberosum]
          Length = 403

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 22/140 (15%)
 Frame = +1

Query: 52  NCLTNIYGSTIRTIICFVNRGSSLGSLG---------------------NFRLLRVLDVV 168
           N L NI  + +R I+ F+N GSS  S+                       FRLLR+LDV 
Sbjct: 29  NLLENI--NCLRRIVDFINYGSSGISIFIPLARSVFFKHEYNFCSPARLRFRLLRILDVC 86

Query: 169 NANFSLFWFHDSFVSPPDALFELIHLRYLAFYYDSDIPSAISKLRNLQTLIIHPVEASRN 348
                   F  SF S   ++ EL+HLRYLA      +  +I KLRNLQ L+IH V    +
Sbjct: 87  --------FPCSF-SCSQSISELVHLRYLACPSFGGLVQSICKLRNLQNLVIHDVSLFAS 137

Query: 349 FGPAR-VYFTFLDLPQLRHL 405
               + + +  L++PQLRH+
Sbjct: 138 LITTQSLAWEVLNMPQLRHI 157


Top