BLASTX nr result
ID: Rehmannia24_contig00013345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00013345
(454 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chro... 118 7e-25
ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chro... 114 1e-23
ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-conta... 106 3e-21
ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-conta... 105 6e-21
emb|CBI26179.3| unnamed protein product [Vitis vinifera] 105 8e-21
gb|ESW26127.1| hypothetical protein PHAVU_003G093200g [Phaseolus... 103 3e-20
ref|XP_006850782.1| hypothetical protein AMTR_s00025p00095750 [A... 101 1e-19
ref|XP_006419805.1| hypothetical protein CICLE_v10006073mg [Citr... 99 8e-19
ref|XP_006286393.1| hypothetical protein CARUB_v10002089mg [Caps... 97 2e-18
ref|NP_197404.2| RNA recognition motif-containing protein [Arabi... 97 2e-18
ref|XP_004508368.1| PREDICTED: glycine-rich RNA-binding protein ... 97 3e-18
ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp.... 97 3e-18
ref|XP_006400458.1| hypothetical protein EUTSA_v10014796mg [Eutr... 96 5e-18
ref|XP_006356682.1| PREDICTED: RNA-binding motif protein, Y chro... 88 1e-15
gb|EOY05517.1| CBS domain-containing protein with a domain of Un... 85 1e-14
ref|XP_006600317.1| PREDICTED: multiple RNA-binding domain-conta... 80 2e-13
ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitoch... 79 8e-13
ref|XP_006489292.1| PREDICTED: polyadenylate-binding protein RBP... 76 5e-12
ref|NP_974808.1| RNA recognition motif-containing protein [Arabi... 76 5e-12
ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protei... 72 1e-10
>ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X1 [Solanum tuberosum]
Length = 168
Score = 118 bits (296), Expect = 7e-25
Identities = 56/92 (60%), Positives = 70/92 (76%)
Frame = -2
Query: 450 IIFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDE 271
IIF+KGLA+ST EG L FS+FG+VSRVK+I K++K+SLGFAY+WF E AQAAV E
Sbjct: 77 IIFLKGLAKSTPEGRLKVVFSQFGDVSRVKIITDKKSKESLGFAYIWFPDNESAQAAVQE 136
Query: 270 MNGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
MNG+F +GRF+ V +A+ GSCK PYKF
Sbjct: 137 MNGKFLDGRFIQVQMAKPGSCKLNIKTMPYKF 168
>ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like [Solanum lycopersicum]
Length = 168
Score = 114 bits (286), Expect = 1e-23
Identities = 52/92 (56%), Positives = 69/92 (75%)
Frame = -2
Query: 450 IIFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDE 271
IIF+KGLA+ST EG L FS+FG V+RVK++ K++K+SLGFAY+WF E AQ+A+ E
Sbjct: 77 IIFLKGLAKSTPEGRLKVVFSQFGNVNRVKIVTDKKSKESLGFAYIWFPDNESAQSAIRE 136
Query: 270 MNGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
MNG+F +GRF+ V +A+ GSCK PYKF
Sbjct: 137 MNGKFLDGRFIQVQMAKPGSCKPNVKSMPYKF 168
>ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 157
Score = 106 bits (265), Expect = 3e-21
Identities = 50/91 (54%), Positives = 69/91 (75%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IF+KGL STSEG LM FS FG+V+ V++ +++ QSLGFAY+WF++EE AQ AV EM
Sbjct: 67 IFVKGLPLSTSEGRLMKVFSEFGDVTLVQLPIDRESGQSLGFAYIWFVKEESAQLAVQEM 126
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
NG+FF+GRF+ V++A+ GS K+ + YKF
Sbjct: 127 NGKFFDGRFIYVTIAKPGSSKSSKRTTAYKF 157
>ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X1 [Glycine max]
Length = 160
Score = 105 bits (262), Expect = 6e-21
Identities = 51/91 (56%), Positives = 68/91 (74%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IF+KGL STSEG LM FS FGEV+ +++ K++ QSLGFAY+WF++EE AQ AV EM
Sbjct: 70 IFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAVLEM 129
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
NG+FF GRF+ V++A+ GS K+ + YKF
Sbjct: 130 NGKFFYGRFIYVTIAKPGSSKSSKRATAYKF 160
>emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 105 bits (261), Expect = 8e-21
Identities = 53/91 (58%), Positives = 65/91 (71%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IFIKGL QST EGSL AFS+FGEVS+V++ R+K + Q LGFA+ WF EE AQ AV M
Sbjct: 66 IFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVKMM 125
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
+G+FF GRFV V +A+ G K +PYKF
Sbjct: 126 DGKFFHGRFVFVKIAKPGPSKRHVKAAPYKF 156
>gb|ESW26127.1| hypothetical protein PHAVU_003G093200g [Phaseolus vulgaris]
Length = 161
Score = 103 bits (256), Expect = 3e-20
Identities = 48/91 (52%), Positives = 67/91 (73%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IF+KGL S SEG LM FS FGEV+ V++ +++ QSLGFA++WF++EE AQ A+ EM
Sbjct: 71 IFVKGLPHSASEGRLMKVFSEFGEVNLVQLPIDEESGQSLGFAFIWFVKEESAQLAIQEM 130
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
NG+FF+GRF+ V++A+ GS K + YKF
Sbjct: 131 NGKFFDGRFIYVTIAKPGSSKKLKGTTAYKF 161
>ref|XP_006850782.1| hypothetical protein AMTR_s00025p00095750 [Amborella trichopoda]
gi|548854453|gb|ERN12363.1| hypothetical protein
AMTR_s00025p00095750 [Amborella trichopoda]
Length = 121
Score = 101 bits (251), Expect = 1e-19
Identities = 48/91 (52%), Positives = 69/91 (75%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
+FIKGL+ ST+EG L AFS+FG+V RVKV+ + +KQSLGFAY+WF EE A+ AV +M
Sbjct: 31 VFIKGLSLSTTEGYLTNAFSQFGKVDRVKVVTDRASKQSLGFAYIWFTCEEDAKLAVKKM 90
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
+G+FF+GRFV+V++A + + +PY+F
Sbjct: 91 DGKFFDGRFVHVTMAWPETLSNKRKATPYRF 121
>ref|XP_006419805.1| hypothetical protein CICLE_v10006073mg [Citrus clementina]
gi|568872263|ref|XP_006489291.1| PREDICTED:
polyadenylate-binding protein RBP47C'-like isoform X1
[Citrus sinensis] gi|557521678|gb|ESR33045.1|
hypothetical protein CICLE_v10006073mg [Citrus
clementina]
Length = 167
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/91 (52%), Positives = 63/91 (69%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IFIKGL +S +EG + AFS+FGEV +VK++ K +KQ LG A+VWF R+E A AV+ M
Sbjct: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
NG+FF GRF+ V +A G K R + YKF
Sbjct: 137 NGKFFYGRFILVKIAEAGLSKNRGRRTRYKF 167
>ref|XP_006286393.1| hypothetical protein CARUB_v10002089mg [Capsella rubella]
gi|482555099|gb|EOA19291.1| hypothetical protein
CARUB_v10002089mg [Capsella rubella]
Length = 177
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/95 (49%), Positives = 65/95 (68%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IF+KG+ S SEG L FS FG+VS VK+I +++T+QSLG+ YVWF +E AQ AV+ M
Sbjct: 83 IFVKGIPDSVSEGRLKIVFSEFGQVSNVKIIINEKTQQSLGYGYVWFNSKEDAQLAVEAM 142
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF*QES 163
NG+FF+GRF+ V + G + R HS + F +S
Sbjct: 143 NGKFFDGRFILVKFGQPGLSRHRKPHSGFLFVNKS 177
>ref|NP_197404.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005259|gb|AED92642.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 172
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/91 (48%), Positives = 64/91 (70%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
+F+KG + S SEG L FS FG+V+ VK+I +++T+QSLG+ YVWF +E AQ+AV+ M
Sbjct: 79 LFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAM 138
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
NG+FF+GRF+ V + G + R HS + F
Sbjct: 139 NGKFFDGRFILVKFGQPGLSRRRRPHSDFLF 169
>ref|XP_004508368.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Cicer arietinum]
Length = 162
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/91 (54%), Positives = 65/91 (71%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IFIKGL S SE L FS FGEV++VK++ K++ QSLGFAY+ F +EE AQ A EM
Sbjct: 72 IFIKGLPLSISEVRLTKVFSGFGEVTQVKILIDKESGQSLGFAYISFDKEESAQLAAKEM 131
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
NG+FF+GRF+ VS+A+ GS K+ + YKF
Sbjct: 132 NGKFFDGRFIYVSIAKPGSSKSWKRTTAYKF 162
>ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319762|gb|EFH50184.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/89 (49%), Positives = 63/89 (70%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
+F+KG + S SEG L FS FG+V+ VK+I +++T+QSLG+ YVWF R+E AQ AV+ M
Sbjct: 77 VFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIINERTRQSLGYGYVWFNRKEDAQLAVEAM 136
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPY 181
NG+FF+GRF+ V + G + R HS +
Sbjct: 137 NGKFFDGRFILVKFGQPGLSRRRRPHSGF 165
>ref|XP_006400458.1| hypothetical protein EUTSA_v10014796mg [Eutrema salsugineum]
gi|557101548|gb|ESQ41911.1| hypothetical protein
EUTSA_v10014796mg [Eutrema salsugineum]
Length = 181
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/91 (49%), Positives = 63/91 (69%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
+F+KGL S SEG L FS +GEVS VK+I +++T+QSLG+ YVWF ++E AQ AV+ M
Sbjct: 88 VFVKGLPDSVSEGRLRKVFSEYGEVSNVKIIVNEKTRQSLGYGYVWFNKKEDAQLAVEAM 147
Query: 267 NGEFFEGRFVNVSLARLGSCKTRPNHSPYKF 175
NG+FF+GRF+ V + G + R + S F
Sbjct: 148 NGKFFDGRFILVKFGQPGMSRRRRSRSDSLF 178
>ref|XP_006356682.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X2 [Solanum tuberosum]
Length = 156
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = -2
Query: 450 IIFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDE 271
IIF+KGLA+ST EG L FS+FG+VSRVK+I K++K+SLGFAY+WF E AQAAV E
Sbjct: 77 IIFLKGLAKSTPEGRLKVVFSQFGDVSRVKIITDKKSKESLGFAYIWFPDNESAQAAVQE 136
Query: 270 MNGE 259
MNG+
Sbjct: 137 MNGK 140
>gb|EOY05517.1| CBS domain-containing protein with a domain of Uncharacterized
protein function isoform 1 [Theobroma cacao]
Length = 628
Score = 84.7 bits (208), Expect = 1e-14
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSR-VKVIRHKQTKQSLGFAYVWFIREEHAQAAVDE 271
+FIKGL QST+EG L FS+FGEV + V V+R + +KQSLG A+VWF E+ AQ AV E
Sbjct: 69 VFIKGLPQSTAEGRLKRVFSQFGEVKQAVNVVRERVSKQSLGSAFVWFDEEQSAQLAVKE 128
Query: 270 MNGEFFEGR 244
MNG+FF+GR
Sbjct: 129 MNGKFFDGR 137
>ref|XP_006600317.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X2 [Glycine max]
Length = 158
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IF+KGL STSEG LM FS FGEV+ +++ K++ QSLGFAY+WF++EE AQ AV EM
Sbjct: 70 IFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAVLEM 129
Query: 267 NGEFF 253
NG+ +
Sbjct: 130 NGKVY 134
>ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Vitis
vinifera]
Length = 145
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IFIKGL QST EGSL AFS+FGEVS+V++ R+K + Q LGFA+ WF EE AQ AV M
Sbjct: 66 IFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVKMM 125
Query: 267 NGE 259
+G+
Sbjct: 126 DGK 128
>ref|XP_006489292.1| PREDICTED: polyadenylate-binding protein RBP47C'-like isoform X2
[Citrus sinensis]
Length = 143
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
IFIKGL +S +EG + AFS+FGEV +VK++ K +KQ LG A+VWF R+E A AV+ M
Sbjct: 77 IFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVENM 136
Query: 267 NGEFFEG 247
NG+ + G
Sbjct: 137 NGKVYLG 143
>ref|NP_974808.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|117168081|gb|ABK32123.1| At5g19030 [Arabidopsis
thaliana] gi|332005260|gb|AED92643.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 126
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/63 (52%), Positives = 48/63 (76%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
+F+KG + S SEG L FS FG+V+ VK+I +++T+QSLG+ YVWF +E AQ+AV+ M
Sbjct: 60 LFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAM 119
Query: 267 NGE 259
NG+
Sbjct: 120 NGK 122
>ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product
[Vitis vinifera]
Length = 111
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = -2
Query: 447 IFIKGLAQSTSEGSLMAAFSRFGEVSRVKVIRHKQTKQSLGFAYVWFIREEHAQAAVDEM 268
+F+KG++ ST+E +L AFS+FGEV K+I K+ + GFAYV F RE+ A+ A+ EM
Sbjct: 36 LFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTEM 95
Query: 267 NGEFFEGRFVNVSLA 223
NG+ +GR V V A
Sbjct: 96 NGKVVDGRTVLVDYA 110