BLASTX nr result
ID: Rehmannia24_contig00013325
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia24_contig00013325 (1401 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EMT20940.1| ABC transporter C family member 10 [Aegilops taus... 60 2e-06 gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 59 6e-06 >gb|EMT20940.1| ABC transporter C family member 10 [Aegilops tauschii] Length = 2212 Score = 60.1 bits (144), Expect = 2e-06 Identities = 33/83 (39%), Positives = 46/83 (55%) Frame = -1 Query: 735 YAMSVFGLSRR*VRRRLEGIWITSICKANCKAIS*ATANFWWGTSLERQNKIH*RVWERI 556 YAMSVF S + C+ +S T NFWWG +R+ KIH W+++ Sbjct: 74 YAMSVFKFSA-----------------SPCEELSQITRNFWWGDENDRR-KIHWLAWDKL 115 Query: 555 TLSKQEGGMGFHDLQVFNGALHA 487 + K++GGMGF DL++FN AL A Sbjct: 116 LMPKEKGGMGFRDLRLFNQALLA 138 >gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1138 Score = 58.5 bits (140), Expect = 6e-06 Identities = 33/90 (36%), Positives = 48/90 (53%) Frame = -1 Query: 756 VAVIAGAYAMSVFGLSRR*VRRRLEGIWITSICKANCKAIS*ATANFWWGTSLERQNKIH 577 VA+ YAMS F L+ K CK ++ A ++FWW +LE + K H Sbjct: 572 VAMAMQVYAMSCFKLT-----------------KTTCKNLTSAMSDFWWN-ALEHKRKTH 613 Query: 576 *RVWERITLSKQEGGMGFHDLQVFNGALHA 487 WE++ L+K+ GG+GF D++ FN AL A Sbjct: 614 WVSWEKLCLAKESGGLGFRDIESFNQALLA 643