BLASTX nr result

ID: Rehmannia24_contig00013325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00013325
         (1401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT20940.1| ABC transporter C family member 10 [Aegilops taus...    60   2e-06
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    59   6e-06

>gb|EMT20940.1| ABC transporter C family member 10 [Aegilops tauschii]
          Length = 2212

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 33/83 (39%), Positives = 46/83 (55%)
 Frame = -1

Query: 735 YAMSVFGLSRR*VRRRLEGIWITSICKANCKAIS*ATANFWWGTSLERQNKIH*RVWERI 556
           YAMSVF  S                  + C+ +S  T NFWWG   +R+ KIH   W+++
Sbjct: 74  YAMSVFKFSA-----------------SPCEELSQITRNFWWGDENDRR-KIHWLAWDKL 115

Query: 555 TLSKQEGGMGFHDLQVFNGALHA 487
            + K++GGMGF DL++FN AL A
Sbjct: 116 LMPKEKGGMGFRDLRLFNQALLA 138


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1138

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 33/90 (36%), Positives = 48/90 (53%)
 Frame = -1

Query: 756 VAVIAGAYAMSVFGLSRR*VRRRLEGIWITSICKANCKAIS*ATANFWWGTSLERQNKIH 577
           VA+    YAMS F L+                 K  CK ++ A ++FWW  +LE + K H
Sbjct: 572 VAMAMQVYAMSCFKLT-----------------KTTCKNLTSAMSDFWWN-ALEHKRKTH 613

Query: 576 *RVWERITLSKQEGGMGFHDLQVFNGALHA 487
              WE++ L+K+ GG+GF D++ FN AL A
Sbjct: 614 WVSWEKLCLAKESGGLGFRDIESFNQALLA 643


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