BLASTX nr result
ID: Rehmannia24_contig00013275
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00013275
(755 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606... 137 4e-30
ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-li... 134 3e-29
ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608... 132 1e-28
ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citr... 132 1e-28
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm... 132 1e-28
ref|XP_002325451.1| DNA polymerase delta subunit 4 family protei... 130 5e-28
ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutr... 129 8e-28
gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus pe... 129 1e-27
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi... 128 2e-27
ref|XP_002319772.1| DNA polymerase delta subunit 4 family protei... 127 4e-27
gb|EXB29122.1| DNA polymerase delta subunit 4 [Morus notabilis] 125 2e-26
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis th... 124 3e-26
gb|ABK93288.1| unknown [Populus trichocarpa] 124 3e-26
gb|AAM65969.1| unknown [Arabidopsis thaliana] 124 3e-26
ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209... 123 8e-26
ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Caps... 120 4e-25
ref|XP_006349440.1| PREDICTED: DNA polymerase delta subunit 4-li... 120 5e-25
ref|XP_006878656.1| hypothetical protein AMTR_s00011p00265890 [A... 118 2e-24
gb|EOY10256.1| Polymerase delta 4 [Theobroma cacao] 116 7e-24
ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263... 115 1e-23
>ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606360 [Solanum tuberosum]
Length = 120
Score = 137 bits (345), Expect = 4e-30
Identities = 65/116 (56%), Positives = 77/116 (66%)
Frame = +2
Query: 80 SHMKGFFXXXXXXXXXXXXXXXXXXXXXXXATCGSDVVQPPALVSHGSLDLQDEYDDKEE 259
S MKGF+ A GS+V QPPAL+SHGSLDL+D YD EE
Sbjct: 5 SSMKGFYKQQKKSGGITKPSKSKSTKPKNAAAIGSNVTQPPALISHGSLDLKDSYDQNEE 64
Query: 260 VLRQFDMNMAYGPCLGMSRLDRWNRANALGLHPPKEIENLLGASIVNSECLWDGRV 427
VLRQFDMNM YGPCLGM+RLDRW RA LG++PP ++E LL ++ V +ECLWDGRV
Sbjct: 65 VLRQFDMNMVYGPCLGMNRLDRWERAKKLGMNPPTDVERLLRSNKVRNECLWDGRV 120
>ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum
lycopersicum]
Length = 120
Score = 134 bits (337), Expect = 3e-29
Identities = 64/116 (55%), Positives = 76/116 (65%)
Frame = +2
Query: 80 SHMKGFFXXXXXXXXXXXXXXXXXXXXXXXATCGSDVVQPPALVSHGSLDLQDEYDDKEE 259
S MKGF+ A GS+V QP AL+SHGSLDL+D YD EE
Sbjct: 5 SSMKGFYKQQKKSGGITKPSKSKSTKPKNAAAIGSNVTQPSALISHGSLDLKDNYDQNEE 64
Query: 260 VLRQFDMNMAYGPCLGMSRLDRWNRANALGLHPPKEIENLLGASIVNSECLWDGRV 427
VLRQFDMNM YGPCLGM+RLDRW RA LG++PP ++E LL ++ V +ECLWDGRV
Sbjct: 65 VLRQFDMNMVYGPCLGMNRLDRWERAKKLGMNPPADVERLLRSNKVRNECLWDGRV 120
>ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608934 [Citrus sinensis]
Length = 122
Score = 132 bits (332), Expect = 1e-28
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
AT GSDV QP AL+SHGSLDL+ +YDD EEVLRQFDMNMAYGPC+GMSRL RW RA LG
Sbjct: 37 ATFGSDVTQPTALISHGSLDLKGDYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYRLG 96
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
L+PPKEIE LL V +ECLW+ RV
Sbjct: 97 LNPPKEIEVLLKTRKVQAECLWEDRV 122
>ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citrus clementina]
gi|557539593|gb|ESR50637.1| hypothetical protein
CICLE_v10033086mg [Citrus clementina]
Length = 122
Score = 132 bits (332), Expect = 1e-28
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
AT GSDV QP AL+SHGSLDL+ +YDD EEVLRQFDMNMAYGPC+GMSRL RW RA LG
Sbjct: 37 ATFGSDVTQPTALISHGSLDLKGDYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYRLG 96
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
L+PPKEIE LL V +ECLW+ RV
Sbjct: 97 LNPPKEIEVLLKTRKVQAECLWEDRV 122
>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
gi|223536760|gb|EEF38401.1| delta DNA polymerase,
putative [Ricinus communis]
Length = 126
Score = 132 bits (332), Expect = 1e-28
Identities = 62/87 (71%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHG-SLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANAL 346
A GS++ QP AL+SHG +LDLQD+YD EEVLRQFDMNMAYGPCLGM+R+ RW RA L
Sbjct: 40 AAIGSNITQPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRL 99
Query: 347 GLHPPKEIENLLGASIVNSECLWDGRV 427
GL+PPK+IE+LL VNSECLWDGRV
Sbjct: 100 GLNPPKQIEDLLKGGKVNSECLWDGRV 126
>ref|XP_002325451.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
gi|222862326|gb|EEE99832.1| DNA polymerase delta subunit
4 family protein [Populus trichocarpa]
Length = 121
Score = 130 bits (327), Expect = 5e-28
Identities = 66/115 (57%), Positives = 73/115 (63%)
Frame = +2
Query: 77 ASHMKGFFXXXXXXXXXXXXXXXXXXXXXXXATCGSDVVQPPALVSHGSLDLQDEYDDKE 256
+S MKGF+ AT GSD+ QP ALVSH S DL+D+YD E
Sbjct: 5 SSSMKGFYRQKKNKSGIRKPTSTSKSSLIHAATLGSDITQPTALVSHDSPDLKDDYDKHE 64
Query: 257 EVLRQFDMNMAYGPCLGMSRLDRWNRANALGLHPPKEIENLLGASIVNSECLWDG 421
+VLRQFDMN AYGPCLGMSRL RW RA LGL+PPKEIE LL V SECLWDG
Sbjct: 65 DVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNPPKEIEGLLKGEKVRSECLWDG 119
>ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutrema salsugineum]
gi|557095301|gb|ESQ35883.1| hypothetical protein
EUTSA_v10009118mg [Eutrema salsugineum]
Length = 124
Score = 129 bits (325), Expect = 8e-28
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
AT GSD QP AL+SHGSLDL D YD +EE+LRQFDMNMAYGPCLGM+RLDRW RA LG
Sbjct: 39 ATQGSDATQPAALISHGSLDLNDAYDKEEEMLRQFDMNMAYGPCLGMTRLDRWERALRLG 98
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
++PP EIE LL V +CLW GRV
Sbjct: 99 MNPPSEIERLLKTEKVQQDCLWQGRV 124
>gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus persica]
Length = 128
Score = 129 bits (323), Expect = 1e-27
Identities = 58/86 (67%), Positives = 72/86 (83%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
A+ GSDV QP AL+SH SLDL+D+YD++E +LRQFDMNMAYGPC+GM+RL+RW RA LG
Sbjct: 43 ASFGSDVTQPTALMSHASLDLKDDYDEQEALLRQFDMNMAYGPCVGMTRLERWERACILG 102
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
L+PPKE+E+LL V ECLWDGR+
Sbjct: 103 LNPPKEVESLLTGGKVCCECLWDGRI 128
>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
subunit 4 family [Arabidopsis lyrata subsp. lyrata]
Length = 122
Score = 128 bits (322), Expect = 2e-27
Identities = 58/86 (67%), Positives = 69/86 (80%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
A GSDV+QP AL+SHGSLDL ++YD +EE+LRQFDMN+AYGPCLGM+RLDRW RA LG
Sbjct: 37 AAQGSDVIQPAALISHGSLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLG 96
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
++PP EIE LL V +CLW GRV
Sbjct: 97 MNPPNEIEKLLKTGKVQQDCLWQGRV 122
>ref|XP_002319772.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
gi|118488437|gb|ABK96033.1| unknown [Populus
trichocarpa] gi|222858148|gb|EEE95695.1| DNA polymerase
delta subunit 4 family protein [Populus trichocarpa]
Length = 122
Score = 127 bits (319), Expect = 4e-27
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
A+ GSD+ QP A VSHGS D +D YD+ EE+LRQFDMNMAYGPCLGMSRL RW RA LG
Sbjct: 37 ASLGSDITQPTAQVSHGSPDHKDYYDEHEELLRQFDMNMAYGPCLGMSRLARWERAQRLG 96
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
L+PP E E LL A +V SEC WDGRV
Sbjct: 97 LNPPNEFEGLLKAEMVQSECWWDGRV 122
>gb|EXB29122.1| DNA polymerase delta subunit 4 [Morus notabilis]
Length = 122
Score = 125 bits (314), Expect = 2e-26
Identities = 58/87 (66%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
AT GSD+ QPPAL+S+ S DL+DEYD +EEVLRQFDMNMAYGPCLGMSRL RW RA+ LG
Sbjct: 36 ATLGSDITQPPALLSNSSPDLRDEYDKEEEVLRQFDMNMAYGPCLGMSRLTRWERASVLG 95
Query: 350 LHPPKEIEN-LLGASIVNSECLWDGRV 427
L+PP+++ + LL A S CLW+GR+
Sbjct: 96 LNPPQQVHHLLLKAPTARSHCLWEGRI 122
>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
delta subunit 4 [Arabidopsis thaliana]
Length = 124
Score = 124 bits (312), Expect = 3e-26
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
A GSDV QP AL+SHGS+DL ++YD +EE+LRQFDMN+ YGPCLGM+RLDRW RA LG
Sbjct: 39 AAQGSDVTQPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLG 98
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
++PP EIE LL V +CLW GRV
Sbjct: 99 MNPPNEIEKLLKTGKVQQDCLWQGRV 124
>gb|ABK93288.1| unknown [Populus trichocarpa]
Length = 122
Score = 124 bits (312), Expect = 3e-26
Identities = 59/86 (68%), Positives = 66/86 (76%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
A+ GSD+ QP A VSHGS D +D YD+ E +LRQFDMNMAYGPCLGMSRL RW RA LG
Sbjct: 37 ASLGSDITQPTAQVSHGSPDHKDYYDEHEGLLRQFDMNMAYGPCLGMSRLARWERAQRLG 96
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
L+PP E E LL A +V SEC WDGRV
Sbjct: 97 LNPPNEFEGLLKAEMVQSECWWDGRV 122
>gb|AAM65969.1| unknown [Arabidopsis thaliana]
Length = 124
Score = 124 bits (312), Expect = 3e-26
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
A GSDV QP AL+SHGS+DL ++YD +EE+LRQFDMN+ YGPCLGM+RLDRW RA LG
Sbjct: 39 AAQGSDVTQPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLG 98
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
++PP EIE LL V +CLW GRV
Sbjct: 99 MNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus]
gi|449523375|ref|XP_004168699.1| PREDICTED:
uncharacterized protein LOC101228956 [Cucumis sativus]
Length = 125
Score = 123 bits (308), Expect = 8e-26
Identities = 59/86 (68%), Positives = 66/86 (76%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
A+ GSD VQP ALVSHGSLDLQD+Y E LRQFDMN AYGPCLGM+R+ RW RA +LG
Sbjct: 40 ASLGSDAVQPAALVSHGSLDLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLG 99
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
L+PPK+I LL A V ECLWD RV
Sbjct: 100 LNPPKDIGTLLKAGKVQLECLWDSRV 125
>ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Capsella rubella]
gi|482573010|gb|EOA37197.1| hypothetical protein
CARUB_v10010654mg [Capsella rubella]
Length = 124
Score = 120 bits (302), Expect = 4e-25
Identities = 55/86 (63%), Positives = 66/86 (76%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
A GSDV QP AL+SHGS+DL +Y +EE+LRQFDM++AYGPCLGM+RLDRW RA LG
Sbjct: 39 AAQGSDVTQPAALISHGSIDLNGDYGKEEEMLRQFDMDIAYGPCLGMTRLDRWERALRLG 98
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
++PP EIE LL V +CLW GRV
Sbjct: 99 MNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_006349440.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum tuberosum]
Length = 133
Score = 120 bits (301), Expect = 5e-25
Identities = 54/87 (62%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDE-YDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANAL 346
A S++ + PAL+SHGS DLQD+ YD+ EE+LRQFDMNM YGPCLG+SRLDRW RA +
Sbjct: 47 AARSSNITRSPALISHGSPDLQDDDYDENEELLRQFDMNMTYGPCLGLSRLDRWERAKSF 106
Query: 347 GLHPPKEIENLLGASIVNSECLWDGRV 427
GL+PP+++E +L +S V +ECLWDG V
Sbjct: 107 GLNPPRDVEPILRSSKVRNECLWDGMV 133
>ref|XP_006878656.1| hypothetical protein AMTR_s00011p00265890 [Amborella trichopoda]
gi|548831999|gb|ERM94801.1| hypothetical protein
AMTR_s00011p00265890 [Amborella trichopoda]
Length = 119
Score = 118 bits (295), Expect = 2e-24
Identities = 49/82 (59%), Positives = 67/82 (81%)
Frame = +2
Query: 182 SDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALGLHPP 361
SD QPPAL+SHGS+D++ ++D EEVLR+FDMNM+YGPC+G++RL+RW RAN LG++PP
Sbjct: 38 SDPAQPPALLSHGSIDIKRDFDQCEEVLRRFDMNMSYGPCIGLTRLERWERANKLGMNPP 97
Query: 362 KEIENLLGASIVNSECLWDGRV 427
K++E LL +CLW+GRV
Sbjct: 98 KDVETLLKGGNAGLDCLWEGRV 119
>gb|EOY10256.1| Polymerase delta 4 [Theobroma cacao]
Length = 178
Score = 116 bits (291), Expect = 7e-24
Identities = 58/87 (66%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHG-SLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANAL 346
AT GS++ QP AL S G SLDL+D++D++EEVLRQFDMNMAYGPCLG++R+ RW RA L
Sbjct: 92 ATFGSNITQPFALTSPGGSLDLKDDFDEQEEVLRQFDMNMAYGPCLGITRMARWERAQRL 151
Query: 347 GLHPPKEIENLLGASIVNSECLWDGRV 427
GL+PPKEIENLL V E L+DGRV
Sbjct: 152 GLNPPKEIENLLKGGKVKLESLFDGRV 178
>ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263057 [Vitis vinifera]
Length = 122
Score = 115 bits (289), Expect = 1e-23
Identities = 58/86 (67%), Positives = 62/86 (72%)
Frame = +2
Query: 170 ATCGSDVVQPPALVSHGSLDLQDEYDDKEEVLRQFDMNMAYGPCLGMSRLDRWNRANALG 349
AT GSDVVQP L +H D DEYD E VLRQFDMNMAYGPCLGMSRL RW RA LG
Sbjct: 39 ATLGSDVVQPSTLSAHNLQD--DEYDGNETVLRQFDMNMAYGPCLGMSRLARWERAQRLG 96
Query: 350 LHPPKEIENLLGASIVNSECLWDGRV 427
L+PPKEIE LL ++CLWDG V
Sbjct: 97 LNPPKEIETLLKQGKARADCLWDGCV 122