BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00013212
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   224   1e-56
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   221   1e-55
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   219   6e-55
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   217   2e-54
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          208   1e-51
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   202   4e-50
ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628...   197   1e-48
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   190   3e-46
emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera]   188   1e-45
emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]   185   7e-45
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   162   5e-38
emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]   159   4e-37
ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263...   158   9e-37
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               147   2e-33
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   146   4e-33
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   143   3e-32
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               143   3e-32
gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola...   142   9e-32
gb|EEC76787.1| hypothetical protein OsI_14890 [Oryza sativa Indi...   141   1e-31
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   140   2e-31

>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  224 bits (571), Expect = 1e-56
 Identities = 119/210 (56%), Positives = 149/210 (70%), Gaps = 11/210 (5%)
 Frame = -1

Query: 599 EAKANLVEPNASKKRKHPGNNQKQG----------KAKKFKGNCFNCGKPNHKAKDCRLP 450
           EAKAN VE   S K K   NN+ +G          K  KF+G CFNCGK  HK+ DCRLP
Sbjct: 238 EAKANFVEHGQSSKAK-TNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 449 KKANRNQVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDM 270
           KK    + +V ++  +  ++S +DL+AVV E N   +  NP+EWW+DTGATRH+CSDK M
Sbjct: 297 KKNKPKEANVIDN--ITKNVSNIDLTAVVSEVN--LVGSNPKEWWIDTGATRHVCSDKKM 352

Query: 269 FSTYTPI-NGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLL 93
           FST+ PI NG K++MGN  TSEI G GKV+LKMTSGKELTL +VL+VP+IRKNLVSGSLL
Sbjct: 353 FSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLL 412

Query: 92  VKAGFRLVFEAQKFVLMKNGQFIGKVYLDN 3
              GFRLVFE+ KFVL K+G ++GK Y+ +
Sbjct: 413 NNHGFRLVFESNKFVLSKSGMYVGKGYMSD 442


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  221 bits (563), Expect = 1e-55
 Identities = 118/210 (56%), Positives = 148/210 (70%), Gaps = 11/210 (5%)
 Frame = -1

Query: 599 EAKANLVEPNASKKRKHPGNNQKQG----------KAKKFKGNCFNCGKPNHKAKDCRLP 450
           EAKAN VE   S K K   NN+ +G          K  KF+G CFNCGK  HK+ DCRLP
Sbjct: 238 EAKANFVEHGQSSKAK-TNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 449 KKANRNQVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDM 270
           KK    + +V +D  +  ++ ++DL+AVV E N   +  NP+EWW+DTGATRH+CSDK M
Sbjct: 297 KKNKPKEANVIDD--ITKNVYDIDLTAVVSEVN--LVGSNPKEWWIDTGATRHVCSDKKM 352

Query: 269 FSTYTPI-NGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLL 93
           FST+ PI NG K++MGN ATSEI G GKV+LKMTSGKELTL +VL+VP+IRKNLVSGSLL
Sbjct: 353 FSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLL 412

Query: 92  VKAGFRLVFEAQKFVLMKNGQFIGKVYLDN 3
              GFRLVF + K VL K+G ++GK Y+ +
Sbjct: 413 NNHGFRLVFXSNKVVLSKSGMYVGKGYMSD 442


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  219 bits (557), Expect = 6e-55
 Identities = 116/210 (55%), Positives = 147/210 (70%), Gaps = 11/210 (5%)
 Frame = -1

Query: 599 EAKANLVEPNASKKRKHPGNNQKQG----------KAKKFKGNCFNCGKPNHKAKDCRLP 450
           EAKAN VE   S   K   NN+ +G          K  KF+G CFNCGK  HK+ DCRLP
Sbjct: 238 EAKANFVEHGQSSNAK-TNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 449 KKANRNQVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDM 270
           KK    + +V +D  +  ++ ++DL+ VV E N   +  NP+EWW+DTGATRH+CSDK M
Sbjct: 297 KKNKPKEANVIDD--ITKNVYDIDLTTVVSEVN--LVGSNPKEWWIDTGATRHVCSDKKM 352

Query: 269 FSTYTPI-NGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLL 93
           FST+ PI NG K++MGN ATSEI G GKV+LKMTSGKELTL +VL+VP+IRKNLVSGSLL
Sbjct: 353 FSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLL 412

Query: 92  VKAGFRLVFEAQKFVLMKNGQFIGKVYLDN 3
              GFRLVF++ K VL K+G ++GK Y+ +
Sbjct: 413 NNHGFRLVFDSNKVVLSKSGMYVGKGYMSD 442


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  217 bits (552), Expect = 2e-54
 Identities = 115/210 (54%), Positives = 147/210 (70%), Gaps = 11/210 (5%)
 Frame = -1

Query: 599 EAKANLVEPNASKKRKHPGNNQKQG----------KAKKFKGNCFNCGKPNHKAKDCRLP 450
           EA+AN VE   S K K   NN+ +G          K  KF+G CFNCGK  HK+ DCRLP
Sbjct: 238 EAQANFVEHGQSSKAK-TNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 296

Query: 449 KKANRNQVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDM 270
           KK    + +V ++  +  ++S++DL+ VV E N   +  NP+EWW+DTGATRH+CSDK M
Sbjct: 297 KKNKPKEANVIDN--ITKNVSDIDLTTVVSEVN--LVGSNPKEWWIDTGATRHVCSDKKM 352

Query: 269 FSTYTPI-NGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLL 93
           FST+ PI NG K++MGN  TSEI G GKV+LKMTSGKELTL +VL+VP+IRKNLV GSLL
Sbjct: 353 FSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVFGSLL 412

Query: 92  VKAGFRLVFEAQKFVLMKNGQFIGKVYLDN 3
              GFRLVFE+ K VL K+G ++GK Y+ +
Sbjct: 413 NNHGFRLVFESNKVVLSKSGMYVGKGYMSD 442


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  208 bits (529), Expect = 1e-51
 Identities = 112/200 (56%), Positives = 144/200 (72%), Gaps = 2/200 (1%)
 Frame = -1

Query: 596 AKANLVEPNASKKRKHPGNNQKQGKAK-KFKGNCFNCGKPNHKAKDCRLPKKANRNQVHV 420
           AKAN VE    KK+K  G      K + KF+G C+NC K  HKA DCRLPKK  + + +V
Sbjct: 238 AKANFVEHGPKKKKKKLGPKGGISKKQTKFQGKCYNCDKMGHKASDCRLPKK--KREANV 295

Query: 419 TEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTPINGR 240
            E+  +   +S+++LSAVV E N   +  NPREWW+DTGATRH+CSDK +F+++   + R
Sbjct: 296 VEN--ITQHVSDINLSAVVLEVNM--VGSNPREWWIDTGATRHVCSDKGLFTSFEAASNR 351

Query: 239 -KLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVKAGFRLVFE 63
            KL+MGN ATSEI G GKV LKMTSGKELTL +VL+VP+IRKNLVSGSLL K GFR+VFE
Sbjct: 352 EKLFMGNSATSEIEGQGKVALKMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFE 411

Query: 62  AQKFVLMKNGQFIGKVYLDN 3
           +   VL KNG ++GK Y+++
Sbjct: 412 SDMVVLSKNGMYVGKGYVND 431


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  202 bits (515), Expect = 4e-50
 Identities = 112/210 (53%), Positives = 141/210 (67%), Gaps = 11/210 (5%)
 Frame = -1

Query: 599 EAKANLVEPNASKKRKHPGNNQKQG----------KAKKFKGNCFNCGKPNHKAKDCRLP 450
           EAKAN VE   S K K   NN+ +G          K  KF+G CFNCGK  HK+ DCRLP
Sbjct: 159 EAKANFVEHGQSSKAK-TNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLP 217

Query: 449 KKANRNQVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDM 270
           KK    + +V +D  +  ++ ++DL+AVV E N   +  NP+EWW+DTGATRH+CSDK M
Sbjct: 218 KKNKPKEANVIDD--ITKNVYDIDLTAVVSEVN--LVGSNPKEWWIDTGATRHVCSDKKM 273

Query: 269 FSTYTPI-NGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLL 93
           FST+ PI NG K++MGN ATSEI G GKV+LKMTSGKELTL +VL+VP+IRKNLVSGSLL
Sbjct: 274 FSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLL 333

Query: 92  VKAGFRLVFEAQKFVLMKNGQFIGKVYLDN 3
              GFRL           +G ++GK Y+ +
Sbjct: 334 NNHGFRL-----------SGMYVGKGYMSD 352


>ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis]
          Length = 2248

 Score =  197 bits (502), Expect = 1e-48
 Identities = 108/202 (53%), Positives = 142/202 (70%), Gaps = 4/202 (1%)
 Frame = -1

Query: 596  AKANLVEPNASKKRKHPGNNQKQGKAKK---FKGNCFNCGKPNHKAKDCRLPKKANRNQV 426
            AKAN+VE +  K +K+     K G +KK   F+G  FNC K  HK  DCRLPKK     V
Sbjct: 1172 AKANVVE-HRPKNKKNKKLGPKGGISKKQTNFQGKYFNCDKMGHKVSDCRLPKKKREENV 1230

Query: 425  HVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTPI- 249
                 +++   +S+++LSAVV E N   +  NPREWW+DTGATRH+CSDK +F+++  + 
Sbjct: 1231 V----ENITQHVSDINLSAVVSEVN--LVGSNPREWWIDTGATRHVCSDKGLFTSFETVS 1284

Query: 248  NGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVKAGFRLV 69
            NG KL+MGN A SEI G G V+LKMTSGKELTL DVL+V +IRKNLVSGSLL K GF++V
Sbjct: 1285 NGEKLFMGNSAMSEIEGQGNVILKMTSGKELTLNDVLYVLEIRKNLVSGSLLNKHGFQMV 1344

Query: 68   FEAQKFVLMKNGQFIGKVYLDN 3
            FE+ + VL KNG ++GK Y+++
Sbjct: 1345 FESNRVVLSKNGMYVGKGYVND 1366


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  190 bits (482), Expect = 3e-46
 Identities = 107/204 (52%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
 Frame = -1

Query: 599 EAKANLVE--PNASKKRKHPGNNQKQGK--AKKFKGNCFNCGKPNHKAKDCRLPKKANRN 432
           EAKAN++E  P  +KKRKH   NQ Q    AKKFKG C+NCGK  HK+ D R        
Sbjct: 407 EAKANVIEQGPKTNKKRKHGDQNQNQESNVAKKFKGKCYNCGKTGHKSNDYR-------- 458

Query: 431 QVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTP 252
                                            N +EWWVDTGATRHICS+K MFSTY P
Sbjct: 459 ---------------------------------NTKEWWVDTGATRHICSNKWMFSTYKP 485

Query: 251 IN-GRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVKAGFR 75
           +    +L+MGN ++S+I G GKV+LKMTSGKELTL DVLHVPDI KNLVSGSLL K GF+
Sbjct: 486 VEQNEELFMGNSSSSKIEGRGKVILKMTSGKELTLNDVLHVPDICKNLVSGSLLSKNGFK 545

Query: 74  LVFEAQKFVLMKNGQFIGKVYLDN 3
           LVF + KFVL KN  F+GK YL +
Sbjct: 546 LVFVSDKFVLTKNEMFVGKGYLSD 569


>emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera]
          Length = 627

 Score =  188 bits (477), Expect = 1e-45
 Identities = 99/199 (49%), Positives = 131/199 (65%)
 Frame = -1

Query: 599 EAKANLVEPNASKKRKHPGNNQKQGKAKKFKGNCFNCGKPNHKAKDCRLPKKANRNQVHV 420
           E+K NLVEPNA+KKRK            +    C+ C K  H+AK+CRL +++   +   
Sbjct: 73  ESKTNLVEPNANKKRKD---------FSEVCWKCYICNKQGHRAKNCRLKEQSKEKE--- 120

Query: 419 TEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTPINGR 240
                    ++ +  + V++E N   MV+NP E WVDTG TRH+  ++++FSTY  +NGR
Sbjct: 121 ---------LTNMLSALVLFEAN---MVDNPNERWVDTGVTRHVYGERNIFSTYVLVNGR 168

Query: 239 KLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVKAGFRLVFEA 60
            L M N+ATS +VG+ KVVLKMT GKEL L DVLHV DIR NLVSGS+L K GF+LVFE+
Sbjct: 169 NLIMRNYATSRVVGIRKVVLKMTFGKELVLTDVLHVLDIRNNLVSGSMLSKNGFKLVFES 228

Query: 59  QKFVLMKNGQFIGKVYLDN 3
            KFVLMKNG ++GK Y+ N
Sbjct: 229 DKFVLMKNGMYVGKGYMTN 247


>emb|CAN69713.1| hypothetical protein VITISV_011261 [Vitis vinifera]
          Length = 382

 Score =  185 bits (470), Expect = 7e-45
 Identities = 93/165 (56%), Positives = 119/165 (72%), Gaps = 2/165 (1%)
 Frame = -1

Query: 599 EAKANLVEPNASKKRKHPGNNQKQGKAK--KFKGNCFNCGKPNHKAKDCRLPKKANRNQV 426
           E+KANLVEP A+KKRKH G +  QGK K  KF G C+ C K  H+AK CRL  ++  N+ 
Sbjct: 219 ESKANLVEPKANKKRKHFGESLSQGKNKYKKFLGKCYICNKQGHRAKXCRLKGQSKENKA 278

Query: 425 HVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTPIN 246
           HVTE++ +   +S L    V++E N   MV+N  +WWV  G TRH+C +++MFSTY P+N
Sbjct: 279 HVTEEEELANMLSAL----VLFEVN---MVDNVNKWWVGMGVTRHVCRERNMFSTYVPVN 331

Query: 245 GRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNL 111
           GR L MGN ATS++VG+GKVVLKMTSGKEL L +VLHVPDI +NL
Sbjct: 332 GRNLIMGNSATSKVVGIGKVVLKMTSGKELVLTNVLHVPDICRNL 376


>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  162 bits (411), Expect = 5e-38
 Identities = 92/213 (43%), Positives = 124/213 (58%), Gaps = 18/213 (8%)
 Frame = -1

Query: 587 NLVEPNASKKRKHPG------NNQKQGKAKKFKGNCFNCGKPNHKAKDCRLPKKANRNQV 426
           N+++ + S K K+ G      NN   G  K+FK  C+ C KP H  +DCR  K  N+ Q 
Sbjct: 161 NMMKESGSSKMKNKGKKRPFTNNTNDGSNKRFKSVCWICNKPGHFKRDCRAAKDKNKMQQ 220

Query: 425 HVTEDKSVPIDMSE-------LDLSAVVYEGNKC----YMVENPREWWVDTGATRHICSD 279
                 S   D S         DL + VY  +K     Y+ ++   WW+D+GAT H+C D
Sbjct: 221 KRFGQGSKDQDPSSHQGQNSVFDLHSKVYYVSKIAEVFYVQDDEVAWWIDSGATIHVCKD 280

Query: 278 KDMFSTYTPI-NGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSG 102
           +  F TY P+ +G  LYMGN +T+ I+G GKVVL+ +SGK L L DV+HVP IRKNLVSG
Sbjct: 281 RGWFKTYEPVQDGSVLYMGNESTAPILGRGKVVLEFSSGKTLDLNDVIHVPGIRKNLVSG 340

Query: 101 SLLVKAGFRLVFEAQKFVLMKNGQFIGKVYLDN 3
           S+L K GF+ V+E+ K+VL K G F+G  Y  N
Sbjct: 341 SVLNKCGFKQVYESDKYVLSKCGVFVGFGYFCN 373


>emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]
          Length = 474

 Score =  159 bits (403), Expect = 4e-37
 Identities = 83/130 (63%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
 Frame = -1

Query: 389 SELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTPIN-GRKLYMGNHAT 213
           + ++LSAVV E   C +V N +EWWVDTGATRHICS+K MFSTY P+    +L+MG  ++
Sbjct: 217 ANMNLSAVVSE---CNIVGNTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGYSSS 273

Query: 212 SEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVKAGFRLVFEAQKFVLMKNG 33
           S++ G GKV+LKMTSGKELTL DVLHVPDIRKNLVS SLL K GF+LVF + KFVL KN 
Sbjct: 274 SKVEGRGKVILKMTSGKELTLNDVLHVPDIRKNLVSRSLLSKNGFKLVFVSDKFVLTKNE 333

Query: 32  QFIGKVYLDN 3
            F+GK YL +
Sbjct: 334 MFVGKGYLSD 343


>ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263787 [Solanum
            lycopersicum]
          Length = 2703

 Score =  158 bits (400), Expect = 9e-37
 Identities = 90/208 (43%), Positives = 128/208 (61%), Gaps = 11/208 (5%)
 Frame = -1

Query: 593  KANLVEPNASKKRKHPGNNQ--KQGKAKKFKGN--------CFNCGKPNHKAKDCRLPKK 444
            KA++VE    K +K P NN+  K  K+K FK          C++C K  H A+DC++ K 
Sbjct: 959  KAHVVE---EKIKKEPANNKFLKAKKSKNFKRTNSNSKSIKCYHCHKIGHYARDCKILKA 1015

Query: 443  ANRNQVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFS 264
              + +      K+        +L A+V E    ++  +  EWW+DTGATRHI  +++ F+
Sbjct: 1016 EKKKEKANNNTKN--------ELVAMVTEA---FVAGDQVEWWIDTGATRHISGNRNSFT 1064

Query: 263  TYTPINGRK-LYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVK 87
            TY  + G K L+MGN +++++VG G V LK TS K +TL+DVLHVPDIRKNLVSG+LL K
Sbjct: 1065 TYELVGGDKVLHMGNSSSAKVVGKGTVELKFTSEKMVTLIDVLHVPDIRKNLVSGTLLSK 1124

Query: 86   AGFRLVFEAQKFVLMKNGQFIGKVYLDN 3
             GF+++FEA KF+L K G F+G  Y  N
Sbjct: 1125 HGFKMIFEADKFILSKQGMFVGNGYATN 1152


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  147 bits (372), Expect = 2e-33
 Identities = 89/217 (41%), Positives = 123/217 (56%), Gaps = 20/217 (9%)
 Frame = -1

Query: 596 AKANLVEPNASKKRKHPGNNQKQGKAKKF------------KGNCFNCGKPNHKAKDCR- 456
           AKAN++E   + KR     + K+    KF            KGNCF CGKP H A  CR 
Sbjct: 228 AKANVIEDKPAPKRYEKKFDHKKKPNNKFSRPSGTNPTFKKKGNCFVCGKPGHHAPQCRH 287

Query: 455 -----LPKKANRNQVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRH 291
                 P KAN  +              E  + AVV + N   +V N  +W VD+GATRH
Sbjct: 288 RAKNDYPPKANLAE-------------GEDTIVAVVSQVN---LVTNVSKWVVDSGATRH 331

Query: 290 ICSDKDMFSTYTPING--RKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRK 117
           IC+++++F++YT +     ++Y+G+  T+ ++G GKV+LK+TSGK L L DVLHVP IR 
Sbjct: 332 ICANRNVFTSYTSVGDGEEQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVLHVPSIRV 391

Query: 116 NLVSGSLLVKAGFRLVFEAQKFVLMKNGQFIGKVYLD 6
           NLVS +LL K G ++ FE+ K V+ KN  F+GK Y D
Sbjct: 392 NLVSVALLSKVGVKVSFESDKIVITKNNVFVGKGYCD 428


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  146 bits (369), Expect = 4e-33
 Identities = 82/212 (38%), Positives = 129/212 (60%), Gaps = 16/212 (7%)
 Frame = -1

Query: 590 ANLVEPN------ASKKRKHPGNNQKQ-------GKAKKFKGNCFNCGKPNHKAKDCRLP 450
           ANLVE +        +++ H G N ++       G+ KK K  C+ C K  HK+  C   
Sbjct: 239 ANLVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQC--- 295

Query: 449 KKANRNQVHVTEDKSVPIDMSELD--LSAVVYEGNKCYMVENPREWWVDTGATRHICSDK 276
              N+ +   ++  +   +++E D  + A + E N   ++EN  +W +DTGA+RH C+++
Sbjct: 296 ---NQRKGRPSQKPTPQANLAEQDSEIIAAIVEAN---LIENKTDWILDTGASRHFCTNR 349

Query: 275 DMFSTYTP-INGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGS 99
           ++   Y   ++G  ++MGN AT+ ++G GKV+LK+TSGK L+L +VL+VP +R+NLVSGS
Sbjct: 350 ELLHDYEDTVDGECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGS 409

Query: 98  LLVKAGFRLVFEAQKFVLMKNGQFIGKVYLDN 3
           LL +AG ++V E  K VL KNG F+GK YL N
Sbjct: 410 LLNRAGLKIVLEGDKVVLTKNGNFVGKGYLSN 441


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  143 bits (361), Expect = 3e-32
 Identities = 92/215 (42%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
 Frame = -1

Query: 596 AKANLVE---PNASK----------KRKHPGNNQKQGKAKKFKGNCFNCGKPNHKAKDCR 456
           + ANLV+   P+AS           K K   N +K+GK K  KG+CF CGKP H AKDC 
Sbjct: 171 SSANLVQKKNPHASHNNNKKVKPDVKPKATTNFKKKGKGKA-KGDCFVCGKPGHWAKDCP 229

Query: 455 LPKKANRNQVHVTED-------KSVPIDMSELDLSAVVYEGNKCYMVENPREWWVDTGAT 297
             K      + ++ED       K +P  +S                V +  +WWVDTGA 
Sbjct: 230 ERKDKKSANMVISEDGGTLGYGKFLPTVLS----------------VCHSPDWWVDTGAN 273

Query: 296 RHICSDKDMFSTYTPINGRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRK 117
            H+C+D  +FS+Y    G  L MGN + + + G+G V LK TSGK + L +V HVP I+K
Sbjct: 274 IHVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKIVQLKNVQHVPSIKK 333

Query: 116 NLVSGSLLVKAGFRLVFEAQKFVLMKNGQFIGKVY 12
           NLVSGSLL + GFRLVFE+ K V+ K G FIGK Y
Sbjct: 334 NLVSGSLLCRDGFRLVFESNKCVVSKYGTFIGKGY 368


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  143 bits (361), Expect = 3e-32
 Identities = 79/164 (48%), Positives = 106/164 (64%), Gaps = 8/164 (4%)
 Frame = -1

Query: 476 HKAKDCRLPKK-------ANRNQVHVTEDKSVPIDMSELDLSAVVYEGNKCYMVENPREW 318
           HK+ DCR P+K         ++Q ++ E+          DL  ++ E   C +V NP+EW
Sbjct: 318 HKSSDCRAPRKDKDKDKGKGKSQANIVEEME-----DADDLCGMISE---CNLVGNPKEW 369

Query: 317 WVDTGATRHICSDKDMFSTYTPIN-GRKLYMGNHATSEIVGLGKVVLKMTSGKELTLVDV 141
           ++D+GATRHICS K++F+TYT +     L+MGN  T+ I G GKV+LKMTSGK LTL +V
Sbjct: 370 FLDSGATRHICSAKEVFATYTHVEVDEDLFMGNTTTTRIAGTGKVMLKMTSGKVLTLNNV 429

Query: 140 LHVPDIRKNLVSGSLLVKAGFRLVFEAQKFVLMKNGQFIGKVYL 9
           LHVP IRKNLV  +LLVK GF+ V  + K V+ KN  F+GK YL
Sbjct: 430 LHVPTIRKNLVYVALLVKNGFKCVLVSDKTVISKNEMFLGKGYL 473


>gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum]
          Length = 853

 Score =  142 bits (357), Expect = 9e-32
 Identities = 78/182 (42%), Positives = 108/182 (59%), Gaps = 1/182 (0%)
 Frame = -1

Query: 560 KRKHPGNNQKQGKAKKFKGNCFNCGKPNHKAKDCRLPKKANRNQVHVTEDKSVPIDMSEL 381
           K+ +  NNQ Q +  + KG CF CGK  H A+ CR  K+    Q +VTE+  V       
Sbjct: 90  KKNNGENNQAQNQQVQDKGPCFVCGKSGHIARFCRFRKRGPNPQANVTEEPFV------- 142

Query: 380 DLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTPINGRKLYM-GNHATSEI 204
              AV+ + N   MVEN   WWVD+GA RH+C DKD F  YT     K  M G+  T+++
Sbjct: 143 ---AVITDIN---MVENVDGWWVDSGANRHVCYDKDWFKKYTHFEEPKTIMLGDAHTTQV 196

Query: 203 VGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVKAGFRLVFEAQKFVLMKNGQFI 24
           +G G V L  +SG+ELTL DVL+ P +RKNL+S  L  K GF+ + E+ ++V++K G F+
Sbjct: 197 LGKGDVELCFSSGRELTLKDVLYTPSMRKNLMSSFLFNKVGFKQIIESDQYVIVKKGIFV 256

Query: 23  GK 18
           GK
Sbjct: 257 GK 258


>gb|EEC76787.1| hypothetical protein OsI_14890 [Oryza sativa Indica Group]
          Length = 330

 Score =  141 bits (356), Expect = 1e-31
 Identities = 83/190 (43%), Positives = 112/190 (58%)
 Frame = -1

Query: 581 VEPNASKKRKHPGNNQKQGKAKKFKGNCFNCGKPNHKAKDCRLPKKANRNQVHVTEDKSV 402
           V+PNA+       N +K+GK K  KG+CF CGK  H AKDC  P++ +R   ++   +  
Sbjct: 123 VKPNAAT------NFKKKGKGKA-KGDCFVCGKSGHWAKDC--PERKDRKSANMVISEGG 173

Query: 401 PIDMSELDLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTPINGRKLYMGN 222
                   L  V+        V +  +WWVDTGA  H+C+D  +FS+Y    G  L MGN
Sbjct: 174 GTSGYGKILLTVL-------SVFHSPDWWVDTGANIHVCADISLFSSYQVRRGSSLLMGN 226

Query: 221 HATSEIVGLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVKAGFRLVFEAQKFVLM 42
            + + + G+G V LK TSGK + L +V HVP I+KNLVSGSLL + GFRLVFE+ K V+ 
Sbjct: 227 GSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVS 286

Query: 41  KNGQFIGKVY 12
           K G F+GK Y
Sbjct: 287 KYGTFVGKGY 296


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1448

 Score =  140 bits (354), Expect = 2e-31
 Identities = 81/183 (44%), Positives = 108/183 (59%)
 Frame = -1

Query: 560 KRKHPGNNQKQGKAKKFKGNCFNCGKPNHKAKDCRLPKKANRNQVHVTEDKSVPIDMSEL 381
           K K   N +K+GK K  KG+CF CGK  H AKDC  P++ +R   ++   +         
Sbjct: 375 KPKAATNFKKKGKGKA-KGDCFVCGKSGHWAKDC--PERKDRKSANMVISEGGGTSGYGK 431

Query: 380 DLSAVVYEGNKCYMVENPREWWVDTGATRHICSDKDMFSTYTPINGRKLYMGNHATSEIV 201
            L  V+        V +  +WWVDTGA  H+C+D  +FS+Y    G  L MGN + + + 
Sbjct: 432 ILPTVL-------SVFHSPDWWVDTGANIHVCADISLFSSYQVGRGSSLLMGNGSLAAVH 484

Query: 200 GLGKVVLKMTSGKELTLVDVLHVPDIRKNLVSGSLLVKAGFRLVFEAQKFVLMKNGQFIG 21
           G+G V LK TSGK + L +V HVP I+KNLVSGSLL + GFRLVFE+ K V+ K G F+G
Sbjct: 485 GVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVG 544

Query: 20  KVY 12
           K Y
Sbjct: 545 KGY 547