BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00013181
         (757 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15105.3| unnamed protein product [Vitis vinifera]              106   1e-20
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi...   106   1e-20
ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containi...    94   5e-17
ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containi...    88   3e-15
gb|EMJ11568.1| hypothetical protein PRUPE_ppa001337mg [Prunus pe...    86   2e-14
ref|XP_006600662.1| PREDICTED: pentatricopeptide repeat-containi...    80   7e-13
ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containi...    80   7e-13
ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containi...    79   2e-12
gb|EOY20555.1| Plastid transcriptionally active 2 isoform 1 [The...    78   3e-12
ref|XP_006579551.1| PREDICTED: pentatricopeptide repeat-containi...    78   4e-12
ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containi...    78   4e-12
gb|ESW27367.1| hypothetical protein PHAVU_003G195800g [Phaseolus...    77   5e-12
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi...    77   8e-12
ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citr...    74   5e-11
ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containi...    74   7e-11
gb|EPS70433.1| hypothetical protein M569_04327 [Genlisea aurea]        73   9e-11
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu...    71   3e-10
ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis...    69   2e-09
ref|XP_006390383.1| hypothetical protein EUTSA_v10018112mg [Eutr...    68   4e-09
ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Caps...    68   4e-09

>emb|CBI15105.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  106 bits (264), Expect = 1e-20
 Identities = 58/103 (56%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3   TRDFPVAKAAYSLLKDVSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
           TRDFPVAK+AY+ L +VSSSFC PGWNKGRI+CQ+ QLKRI S              +TL
Sbjct: 526 TRDFPVAKSAYAFLNEVSSSFCFPGWNKGRIVCQRSQLKRILSVTEQHSDEYKKDRIITL 585

Query: 183 RNSPFPLSGTKKSTSDQKPQ--STSDANRISFRSNTELMTSGV 305
            NSPFPL GT  S S+ K    S +DA R S  + TELMTS V
Sbjct: 586 SNSPFPLPGTNTSMSNVKRDQLSNADAER-SIMTRTELMTSTV 627


>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Vitis vinifera]
          Length = 869

 Score =  106 bits (264), Expect = 1e-20
 Identities = 58/103 (56%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3    TRDFPVAKAAYSLLKDVSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            TRDFPVAK+AY+ L +VSSSFC PGWNKGRI+CQ+ QLKRI S              +TL
Sbjct: 768  TRDFPVAKSAYAFLNEVSSSFCFPGWNKGRIVCQRSQLKRILSVTEQHSDEYKKDRIITL 827

Query: 183  RNSPFPLSGTKKSTSDQKPQ--STSDANRISFRSNTELMTSGV 305
             NSPFPL GT  S S+ K    S +DA R S  + TELMTS V
Sbjct: 828  SNSPFPLPGTNTSMSNVKRDQLSNADAER-SIMTRTELMTSTV 869


>ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Solanum tuberosum]
          Length = 860

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 54/103 (52%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3    TRDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVT 179
            TRD PVAKAAYS LKD VSSSF  PGWNKGRI+CQ+ QLKR FS              + 
Sbjct: 758  TRDLPVAKAAYSFLKDTVSSSFSFPGWNKGRIVCQRTQLKRTFSSAEPSAEASKGDRLIP 817

Query: 180  LRNSPFPLSGTKKSTSDQKPQSTSDA-NRISFRSNTELMTSGV 305
            L NSP  L GT+ S SD K   +++A +  S R + ELM S V
Sbjct: 818  LSNSPISLLGTQTSMSDAKRSESANADSERSTRPDPELMASSV 860


>ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Solanum lycopersicum]
          Length = 860

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3    TRDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVT 179
            TRD PVAKAAYS LKD +SSSF  PGWNKGRI+CQK QLKR FS              + 
Sbjct: 758  TRDLPVAKAAYSFLKDTISSSFSFPGWNKGRIVCQKTQLKRTFSSAEPSVEASKGDRLIP 817

Query: 180  LRNSPFPLSGTKKSTS-DQKPQSTSDANRISFRSNTELMTSGV 305
            L NS   L GT+ S S  ++ +S +  +  S R + ELMTS V
Sbjct: 818  LSNSLISLLGTQTSMSVAKRSESVNADSERSTRPDPELMTSSV 860


>gb|EMJ11568.1| hypothetical protein PRUPE_ppa001337mg [Prunus persica]
          Length = 850

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 49/103 (47%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3    TRDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVT 179
            T+D P+AKAAYS L+D + SSF  P WNKGRI+CQ+PQLKRI S              +T
Sbjct: 748  TQDLPIAKAAYSFLEDNMPSSFSFPKWNKGRILCQRPQLKRILSSIEPSTDGSERKKIIT 807

Query: 180  LRNSPFPLSGTKKSTSDQKPQSTSDANRIS-FRSNTELMTSGV 305
            L NS FP  GTK S+ D      +D       R  TEL+TS V
Sbjct: 808  LSNSLFPPLGTKTSSKDVNSGRYNDVTSDERLRIRTELLTSAV 850


>ref|XP_006600662.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 860

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            +DFP+AKAA S L+D V SSF  PGWNKGRI+CQ+ QL+RI S              V+L
Sbjct: 760  QDFPIAKAAISFLQDNVPSSFTFPGWNKGRIVCQQSQLRRILSGTESSSSRKKMDKLVSL 819

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTSGV 305
             N+P   +G   S SD +    +D +  +  + TEL+TS +
Sbjct: 820  SNTPLTTAGVITSKSDVQSGKANDVDSRTDSTRTELLTSAI 860


>ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 859

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            +DFP+AKAA S L+D V SSF  PGWNKGRI+CQ+ QL+RI S              V+L
Sbjct: 759  QDFPIAKAAISFLQDNVPSSFTFPGWNKGRIVCQQSQLRRILSGTESSSSRKKMDKLVSL 818

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTSGV 305
             N+P   +G   S SD +    +D +  +  + TEL+TS +
Sbjct: 819  SNTPLTTAGVITSKSDVQSGKANDVDSRTDSTRTELLTSAI 859


>ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Cicer arietinum]
          Length = 861

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            +DFP+AKAA+  L+D VSS+F  PGWNKGRI+CQ+ QL+RI S              V+L
Sbjct: 761  QDFPIAKAAFLFLQDIVSSAFTYPGWNKGRIVCQQSQLRRILSGTGSSSSRKKMDKLVSL 820

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTSGV 305
             N+P   +G   S SD +    +D +  +  + TEL+TS V
Sbjct: 821  SNAPLTPAGAITSKSDVQRGKANDVDSRTDSTRTELLTSAV 861


>gb|EOY20555.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
          Length = 859

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 44/97 (45%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            RD P AKAAY+ L+D VSSSF  PGWNKGRI+CQ+ QLKRI S              + L
Sbjct: 759  RDIPTAKAAYTFLQDIVSSSFSFPGWNKGRIVCQRSQLKRILSATGSSSDESKADNIIAL 818

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELM 293
             N P P  G K S  D +     +A   +    TELM
Sbjct: 819  SNFPIPSMGVKSSPGDVEYTQHDNAISETKMRRTELM 855


>ref|XP_006579551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 858

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            +DFP+AKAA S L+D V SSF  PGWNKGRI+CQ+ QL+RI S              ++L
Sbjct: 758  QDFPIAKAAISFLQDNVPSSFAFPGWNKGRIVCQQSQLRRILSGTESSSSRKKMDKLISL 817

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTSGV 305
             N+P   +G   S SD +    +  +  +  + TEL+TS +
Sbjct: 818  SNTPLTTAGAITSKSDAQSGKANGVDSRTDSTRTELLTSAI 858


>ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 857

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            +DFP+AKAA S L+D V SSF  PGWNKGRI+CQ+ QL+RI S              ++L
Sbjct: 757  QDFPIAKAAISFLQDNVPSSFAFPGWNKGRIVCQQSQLRRILSGTESSSSRKKMDKLISL 816

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTSGV 305
             N+P   +G   S SD +    +  +  +  + TEL+TS +
Sbjct: 817  SNTPLTTAGAITSKSDAQSGKANGVDSRTDSTRTELLTSAI 857


>gb|ESW27367.1| hypothetical protein PHAVU_003G195800g [Phaseolus vulgaris]
          Length = 857

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD--VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVT 179
            +DFP+AKAA S L+D   SSSF  P WNKGRI+CQ+ QL++I S              ++
Sbjct: 759  QDFPIAKAAMSFLQDNVPSSSFTFPEWNKGRIVCQQSQLRQILSGTESSSSRKKMGKLIS 818

Query: 180  LRNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTSGV 305
            L NSP   +G K S SD+K    +D +  +  + TEL+TS V
Sbjct: 819  LSNSPLTTAGAKASKSDRK---ANDVDSRTDSTRTELLTSAV 857


>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 862

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3    TRDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVT 179
            T+D PVAKAAYS L+D +S +F  P WN GRI+CQ+ QLK++ S                
Sbjct: 760  TQDLPVAKAAYSFLQDNMSGAFNFPKWNNGRILCQRSQLKKLLSSIEPSTDGSSSKSICI 819

Query: 180  LRNSPFPLSGTKKSTSD-QKPQSTSDANRISFRSNTELMTSGV 305
            L NSPFP  GTK S +D    +    ++  + R+ TEL+TS V
Sbjct: 820  LSNSPFPPPGTKISPTDVDSGRYNGTSSDATSRTRTELLTSTV 862


>ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citrus clementina]
            gi|557541980|gb|ESR52958.1| hypothetical protein
            CICLE_v10018817mg [Citrus clementina]
          Length = 871

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3    TRDFPVAKAAYSLLKDVSSS-FCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVT 179
            T D P+AKAAY+ L++ +SS F  P WNKGRIICQ+ QLKRI S              ++
Sbjct: 769  TEDLPIAKAAYTFLQENASSLFSFPQWNKGRIICQRTQLKRILSGRESSSDGSKKDNIIS 828

Query: 180  LRNSPFPLSGTKKSTSDQKPQSTSDAN-RISFRSNTELMTS 299
            L NSPF     K ST+  +     +AN      ++TELMTS
Sbjct: 829  LSNSPFSPPDRKASTTGVRNGLFDNANSETKMSASTELMTS 869


>ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Citrus sinensis]
          Length = 871

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3    TRDFPVAKAAYSLLKDVSSS-FCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVT 179
            T D PVAKAAY+ L++ +SS F  P WNKGRIICQ+ QLKRI S              ++
Sbjct: 769  TEDLPVAKAAYTFLQENASSLFNFPQWNKGRIICQRTQLKRILSGRESSSDGSKKDNIIS 828

Query: 180  LRNSPFPLSGTKKSTSDQKPQSTSDAN-RISFRSNTELMTS 299
            L NSPF     K ST+  +     +AN      ++TELMTS
Sbjct: 829  LSNSPFSPPDRKASTTGLRNGLFDNANSETKMSASTELMTS 869


>gb|EPS70433.1| hypothetical protein M569_04327 [Genlisea aurea]
          Length = 99

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 38/65 (58%), Positives = 42/65 (64%)
 Frame = +3

Query: 6   RDFPVAKAAYSLLKDVSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTLR 185
           RDFPVA+AAYSLLKDVSSSF    WN+GRI+CQK QLKR   K             +TL 
Sbjct: 8   RDFPVARAAYSLLKDVSSSFGFSAWNRGRIVCQKSQLKRALHK-----TKESPTSSLTLS 62

Query: 186 NSPFP 200
           N PFP
Sbjct: 63  NDPFP 67


>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
            gi|550322283|gb|EEF06266.2| hypothetical protein
            POPTR_0015s08030g [Populus trichocarpa]
          Length = 866

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            +DFP+ KA +S L+D V SSF   GWN GRI CQ+ QLKR                 + L
Sbjct: 766  QDFPIGKAVHSFLQDIVPSSFSYSGWNNGRITCQRSQLKRFLLGTELVSDGTKKDKFIML 825

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTSGV 305
             NSPF L+GT+ S+  +        +     ++TELMTS V
Sbjct: 826  TNSPFSLAGTRTSSDIETSLHNKSNSGARMGTSTELMTSTV 866


>ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
            gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g74850, chloroplastic; AltName: Full=Protein PLASTID
            TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
            gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535
            DUF17 domains [Arabidopsis thaliana]
            gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical
            protein; 81052-84129 [Arabidopsis thaliana]
            gi|332197518|gb|AEE35639.1| plastid transcriptionally
            active 2 [Arabidopsis thaliana]
          Length = 862

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            R+ P+AKAA+S L+D VSSSF   GWN GRI+CQ+ QLK++ S              V L
Sbjct: 763  RESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLSTKEPTSEESENKNLVAL 822

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTS 299
             NSP   +GT+ STS     S +   R + R+  EL  S
Sbjct: 823  ANSPIFAAGTRASTSSDTNHSGNPTQRRT-RTKKELAGS 860


>ref|XP_006390383.1| hypothetical protein EUTSA_v10018112mg [Eutrema salsugineum]
            gi|557086817|gb|ESQ27669.1| hypothetical protein
            EUTSA_v10018112mg [Eutrema salsugineum]
          Length = 863

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            R+ P+AKAA+S L+D VSSSF   GWN GRI+CQ+ QLK++ +              V L
Sbjct: 763  RESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLATKEPTSEESQNKYLVAL 822

Query: 183  RNSPFPLSGTKKSTSDQKPQSTSDANRISFRSNTELMTS 299
             NSP   +GT+ STS     S  + ++   +   EL  S
Sbjct: 823  SNSPIFAAGTRTSTSSDTNHSGGNPSQRRTKMKKELAGS 861


>ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Capsella rubella]
            gi|482569319|gb|EOA33507.1| hypothetical protein
            CARUB_v10019779mg [Capsella rubella]
          Length = 865

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +3

Query: 6    RDFPVAKAAYSLLKD-VSSSFCLPGWNKGRIICQKPQLKRIFSKXXXXXXXXXXXXXVTL 182
            R+ P+AKAA+S L+D VSSSF   GWN GRI+CQ+ QLK++ S              V L
Sbjct: 764  RESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLSTKEPTSEESQDKNLVAL 823

Query: 183  RNSPFPLSGTKKSTSDQKPQSTS 251
             NSP   +GT+ STS     S S
Sbjct: 824  TNSPVFAAGTRTSTSKDTNHSDS 846