BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00013140
         (638 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   225   1e-56
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   224   1e-56
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   222   6e-56
emb|CAN80750.1| hypothetical protein VITISV_017861 [Vitis vinifera]   221   1e-55
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   217   3e-54
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    213   4e-53
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   212   8e-53
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                      211   1e-52
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     209   5e-52
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                     209   5e-52
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                     209   5e-52
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]   208   9e-52
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]   208   1e-51
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   207   3e-51
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]   206   4e-51
emb|CAN75777.1| hypothetical protein VITISV_031053 [Vitis vinifera]   206   4e-51
gb|AAB82754.1| retrofit [Oryza longistaminata]                        206   6e-51
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  205   1e-50
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   204   2e-50
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]        204   2e-50

>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  225 bits (573), Expect = 1e-56
 Identities = 116/212 (54%), Positives = 149/212 (70%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            +T  W+I+QID NNAFLNG++ E+V++ QP GF+ +S P HVCKL K+LYGLKQAPR WF
Sbjct: 590  ITYNWEIRQIDFNNAFLNGEITETVYLSQPAGFVSTSHPQHVCKLQKALYGLKQAPRVWF 649

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
            +KL++ L + GF++S SD+SLF+ K +G             ITG N   +  LI+ L ++
Sbjct: 650  HKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDLLITGNNVPLVQTLIQDLQNR 709

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            FALK LG V  FLG E  RT+ GL LTQSKY +DLL KT M + KP  TP+S + KL  +
Sbjct: 710  FALKDLGLVKDFLGFEALRTTTGLHLTQSKYTTDLLIKTKMHSAKPVPTPMSAALKLHAA 769

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
               AF +PT+YRSTIGALQYLT TRPDI+FAV
Sbjct: 770  SGPAFSDPTLYRSTIGALQYLTYTRPDIAFAV 801


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  224 bits (572), Expect = 1e-56
 Identities = 113/212 (53%), Positives = 147/212 (69%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            ++  W I+Q+DVNNAFLNGDL E VFM QP+GFID   P  VC+L+K+LYGLKQAPRAWF
Sbjct: 1035 LSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWF 1094

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
             KL + L+S GFV++ SD SLFL+                 + G ++ AI  LI  L  +
Sbjct: 1095 EKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSE 1154

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F+LK LGEV YFLG++V+ T+ GL L+Q+KYI DLL KT M++CKP  TP+ T  KL + 
Sbjct: 1155 FSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVG 1214

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
            D    E+   YRST+GALQY+TITRP++SF+V
Sbjct: 1215 DGDPVEDLHGYRSTVGALQYVTITRPELSFSV 1246


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  222 bits (566), Expect = 6e-56
 Identities = 113/209 (54%), Positives = 144/209 (68%)
 Frame = -2

Query: 628  QWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWFNKL 449
            QWK++Q+DVNNAFLNGDL+E +FM QP+GFID   P +VCKLNKSLYGLKQAPRAWF KL
Sbjct: 984  QWKVRQLDVNNAFLNGDLHEDIFMHQPQGFIDPVNPNYVCKLNKSLYGLKQAPRAWFEKL 1043

Query: 448  KQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQFAL 269
             Q L   GF ++ SD SLF+                  ITG N   +  +I  L +QFAL
Sbjct: 1044 HQALGILGFSSTKSDQSLFINITPTHSTYILVYVDDILITGNNDQFVQHVITQLNNQFAL 1103

Query: 268  KTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALSDSK 89
            K LG++ YFLG++V  TS G+ L+Q+KYIS+LL KT ML+ K   TP+ ++  L+ S S 
Sbjct: 1104 KDLGDIDYFLGIQVKHTSAGMHLSQAKYISNLLQKTKMLHVKSVPTPMVSNQSLSNSGSA 1163

Query: 88   AFENPTVYRSTIGALQYLTITRPDISFAV 2
             F N  +YRST+GALQY TITRPDI+++V
Sbjct: 1164 PFSNTQLYRSTVGALQYATITRPDITYSV 1192


>emb|CAN80750.1| hypothetical protein VITISV_017861 [Vitis vinifera]
          Length = 762

 Score =  221 bits (563), Expect = 1e-55
 Identities = 116/204 (56%), Positives = 144/204 (70%)
 Frame = -2

Query: 613  QIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWFNKLKQFLV 434
            +ID+NN FLNG L+E V M QPEGF+ S+ PTHVCKL KS YGLKQAPRAWF +L+  LV
Sbjct: 545  EIDINNVFLNGILHEDVNMCQPEGFVSSTHPTHVCKLIKSHYGLKQAPRAWFVQLRSALV 604

Query: 433  SQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQFALKTLGE 254
            S GF  S+S +SLF  + +G             I G +S  I  +I+ L  +FALKTLG 
Sbjct: 605  SWGFQPSISHNSLFHSRKNGHLVLVLVYVDDILIIGDSSALIHSMIQALTSRFALKTLGS 664

Query: 253  VSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALSDSKAFENP 74
            +SYFLG +  R S GL L Q+KYISDLL KT+M++ K +STP++   KLAL DS  F + 
Sbjct: 665  ISYFLGFKAFRDSSGLYLNQAKYISDLLVKTNMVHAKTSSTPMALDQKLALEDSAPFPDV 724

Query: 73   TVYRSTIGALQYLTITRPDISFAV 2
            T+YRSTIGALQYLT+TRPDISF+V
Sbjct: 725  TLYRSTIGALQYLTLTRPDISFSV 748


>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  217 bits (552), Expect = 3e-54
 Identities = 109/213 (51%), Positives = 147/213 (69%), Gaps = 1/213 (0%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V N+W+++Q+DVNNAFLNG L E V+M QPEGFID SRP HVCKL K+LYGLKQAPRAWF
Sbjct: 422  VMNKWELRQVDVNNAFLNGILVEDVYMGQPEGFIDPSRPLHVCKLKKALYGLKQAPRAWF 481

Query: 457  NKLKQFLVSQ-GFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGD 281
             +LK  +V + GF  S SD+SLF K                 ITG +   + ++I  + +
Sbjct: 482  ERLKDAMVVKWGFQNSRSDNSLFYKWIGDQVIFVLVYVDDIIITGSSDKMVQQVITNMQN 541

Query: 280  QFALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLAL 101
             FALK LG++SYFLG+EVT+T+ G+ L+QSKYI+D+L K +M +C P  TP++T H L  
Sbjct: 542  AFALKDLGKLSYFLGIEVTKTASGIYLSQSKYIADILAKHNMADCSPVPTPMATGHYLTK 601

Query: 100  SDSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
                   N + Y+S +GALQY+T+TRP+I+F+V
Sbjct: 602  GSGSVISNSSQYKSAVGALQYVTLTRPEIAFSV 634


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  213 bits (542), Expect = 4e-53
 Identities = 109/212 (51%), Positives = 143/212 (67%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V   W I Q+D+NNAFL G LNE V++ QP GFID  RP+HVC+LNK+LYGLKQAPRAW+
Sbjct: 1019 VKRNWSIHQVDINNAFLQGTLNEEVYVSQPPGFIDRDRPSHVCRLNKALYGLKQAPRAWY 1078

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
             +L++FL+  GFV S++D+SLF+                  I G N+  +      L  +
Sbjct: 1079 QELRRFLLQAGFVNSLADASLFIYNRHNTFMYVLVYVDDIIIAGENA-LVQAFNASLASR 1137

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F+LK LG +SYFLG+E TRTS GL L Q KYI+DLL K +ML+ KP STP+S + KL+L 
Sbjct: 1138 FSLKDLGPLSYFLGIEATRTSRGLHLMQRKYITDLLKKHNMLDTKPVSTPMSPTPKLSLL 1197

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
               A ++ T YR+ +G+LQYL  TRPDI+FAV
Sbjct: 1198 SGTALDDATEYRTVLGSLQYLAFTRPDIAFAV 1229


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  212 bits (539), Expect = 8e-53
 Identities = 108/208 (51%), Positives = 138/208 (66%)
 Frame = -2

Query: 625  WKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWFNKLK 446
            W + Q+DV NAFL+GDL E VFM QP GFI+S  P+HVCKLNK+LYGLKQAPRAW+NKL 
Sbjct: 814  WSVHQLDVQNAFLHGDLEEHVFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLS 873

Query: 445  QFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQFALK 266
              L+  GF AS +DSS+F+  +               +TG +S  +   I  L   FAL+
Sbjct: 874  TSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALR 933

Query: 265  TLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALSDSKA 86
             LG V+YFLG+EV R+     L+Q KY  DLL +T+ML+ KP +TP      L+  D + 
Sbjct: 934  DLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEP 993

Query: 85   FENPTVYRSTIGALQYLTITRPDISFAV 2
            F + T+YRST+GALQYLT+TRPDISFAV
Sbjct: 994  FSDATLYRSTVGALQYLTLTRPDISFAV 1021


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score =  211 bits (537), Expect = 1e-52
 Identities = 104/212 (49%), Positives = 145/212 (68%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V+  W I+QIDVNNAFL G L++ V++ QP GF+D   P HVC+L+K+LYGLKQAPRAW+
Sbjct: 1036 VSKGWSIRQIDVNNAFLQGTLSDEVYVMQPPGFVDKDNPHHVCRLHKALYGLKQAPRAWY 1095

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
             +L+ +L++QGFV S++D+SLF  +                ITG ++  I   I  L  +
Sbjct: 1096 QELRSYLLTQGFVNSIADTSLFTLRHKRTILYVLVYVDDMLITGSDTNIITRFIANLAAR 1155

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F+LK LGE+SYFLG+E TRTS GL L Q +Y+ DLL KT+ML   P  TP+S + KL+L+
Sbjct: 1156 FSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLT 1215

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
                 + P+ YR+ +G+LQYL+ TRPDI++AV
Sbjct: 1216 SGTPLDKPSEYRAVLGSLQYLSFTRPDIAYAV 1247


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  209 bits (532), Expect = 5e-52
 Identities = 105/212 (49%), Positives = 144/212 (67%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V+  W I+QIDVNNAFL G L++ V++ QP GF+D     HVC+L K+LYGLKQAPRAW+
Sbjct: 1040 VSKGWSIRQIDVNNAFLQGTLSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWY 1099

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
             +L+ +L++QGFV SV+D+SLF  + +              ITG ++  I   I  L  +
Sbjct: 1100 QELRSYLLTQGFVNSVADTSLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAAR 1159

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F+LK LGE+SYFLG+E TRTS GL L Q +Y+ DLL KT+ML   P  TP+S + KL+L+
Sbjct: 1160 FSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLT 1219

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
              K  + P+ YR+ +G+LQYL  TRPDI++AV
Sbjct: 1220 SGKPLDKPSEYRAVLGSLQYLLFTRPDIAYAV 1251


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  209 bits (532), Expect = 5e-52
 Identities = 105/212 (49%), Positives = 144/212 (67%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V+  W I+QIDVNNAFL G L++ V++ QP GF+D     HVC+L K+LYGLKQAPRAW+
Sbjct: 1040 VSKGWSIRQIDVNNAFLQGTLSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWY 1099

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
             +L+ +L++QGFV SV+D+SLF  + +              ITG ++  I   I  L  +
Sbjct: 1100 QELRSYLLTQGFVNSVADTSLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAAR 1159

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F+LK LGE+SYFLG+E TRTS GL L Q +Y+ DLL KT+ML   P  TP+S + KL+L+
Sbjct: 1160 FSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLT 1219

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
              K  + P+ YR+ +G+LQYL  TRPDI++AV
Sbjct: 1220 SGKPLDKPSEYRAVLGSLQYLLFTRPDIAYAV 1251


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  209 bits (532), Expect = 5e-52
 Identities = 105/212 (49%), Positives = 144/212 (67%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V+  W I+QIDVNNAFL G L++ V++ QP GF+D     HVC+L K+LYGLKQAPRAW+
Sbjct: 1040 VSKGWSIRQIDVNNAFLQGTLSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWY 1099

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
             +L+ +L++QGFV SV+D+SLF  + +              ITG ++  I   I  L  +
Sbjct: 1100 QELRSYLLTQGFVNSVADTSLFTLRHERTILYVLVYVDDMLITGSDTNIITRFIANLAAR 1159

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F+LK LGE+SYFLG+E TRTS GL L Q +Y+ DLL KT+ML   P  TP+S + KL+L+
Sbjct: 1160 FSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLT 1219

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
              K  + P+ YR+ +G+LQYL  TRPDI++AV
Sbjct: 1220 SGKPLDKPSEYRAVLGSLQYLLFTRPDIAYAV 1251


>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score =  208 bits (530), Expect = 9e-52
 Identities = 107/210 (50%), Positives = 140/210 (66%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            +   W+I+Q+D+NNAFLNG L E+VFM +P+ FI  ++P H+CKL K+LYGLKQAPRAWF
Sbjct: 375  IAQGWEIRQLDINNAFLNGYLQENVFMSEPKDFIHPTKPHHICKLRKALYGLKQAPRAWF 434

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
            ++LK  L+  GF  S S++SLFL K  G             ITG NS  I +L+  L   
Sbjct: 435  DRLKDALLQWGFQDSKSNASLFLYKIKGIKLMPLVYVDNILITGNNSTTILDLVHDLNKS 494

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F LK LG + YFLG++  +    L LTQSKYI++LL KT+M   KP  TP  +   L+ S
Sbjct: 495  FLLKDLGSLHYFLGIKAFQDETCLNLTQSKYIANLLQKTNMAVAKPLPTPTISRKVLSKS 554

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISF 8
            D    +NPT+YRST+GALQY+TITRPDIS+
Sbjct: 555  DGDPMDNPTMYRSTVGALQYVTITRPDISY 584


>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score =  208 bits (529), Expect = 1e-51
 Identities = 104/212 (49%), Positives = 139/212 (65%)
 Frame = -2

Query: 637 VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
           V+  W ++Q+DVNNAFL G L E VFM QP GFID   P HVCKL K++YGLKQAPRAW+
Sbjct: 56  VSQGWSLRQLDVNNAFLQGTLTEDVFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWY 115

Query: 457 NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
           ++L QFL+  GF+ S++D+SLF+                  ITG N  A    I+ L  +
Sbjct: 116 HELCQFLLQFGFINSIADTSLFIFNNHDTILYLLVYVDDIIITGNNVEAAQTFIQQLSQR 175

Query: 277 FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
           F+LK LG ++YFLG+EVT  + GL L+Q KYI+DLL +T M   KP  TP++TS  L L 
Sbjct: 176 FSLKDLGPLTYFLGVEVTSHTNGLFLSQRKYIADLLNRTHMTEAKPAPTPLATSPILTLQ 235

Query: 97  DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
                 +PT YR+ +G+LQYL++TRPDI++ V
Sbjct: 236 SGTPLSDPTEYRTVVGSLQYLSLTRPDIAYTV 267


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  207 bits (526), Expect = 3e-51
 Identities = 105/214 (49%), Positives = 145/214 (67%), Gaps = 2/214 (0%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V+  W ++Q+DV NAFL+G L E V+M QP G+ DSS P +VCKL+K+LYGLKQAPRAW+
Sbjct: 837  VSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGYVCKLDKALYGLKQAPRAWY 896

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
            ++L + L   GF  S +D+SLF                   +T     A+  L++ L  +
Sbjct: 897  SRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKE 956

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            FALK LG++ YFLG+EVT+ SGG+VLTQ KY++DLL + +M +CKP STP+STS KL+++
Sbjct: 957  FALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSIN 1016

Query: 97   DSKAF--ENPTVYRSTIGALQYLTITRPDISFAV 2
            +       + T YRS +GALQYLT+TRPDI+F V
Sbjct: 1017 EGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPV 1050


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score =  206 bits (525), Expect = 4e-51
 Identities = 103/212 (48%), Positives = 136/212 (64%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V   W ++Q+D NN FL G L E  FM QP GFID   P HVCKL K++YGLKQAPRAW+
Sbjct: 716  VXQGWSLRQLDXNNXFLQGTLTEDXFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWY 775

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
            ++L+QFL+  GF+ S+ D+SLF+    G             ITG N  A    I+ L  +
Sbjct: 776  HELRQFLLQFGFINSIVDTSLFIFNNHGTILYLLVHVDDIIITGNNVEAAQTFIQQLSQR 835

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F+LK LG ++YFLG+EVT  + GL L+Q KYI+DLL +T M   KP  TP++TS  L L 
Sbjct: 836  FSLKDLGPLTYFLGVEVTSHTNGLFLSQHKYIADLLNRTHMTEAKPAPTPLATSPILTLQ 895

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISFAV 2
                  NPT YR+ +G+LQYL++TRPDI++ V
Sbjct: 896  SGTPLSNPTEYRTMVGSLQYLSLTRPDIAYTV 927


>emb|CAN75777.1| hypothetical protein VITISV_031053 [Vitis vinifera]
          Length = 742

 Score =  206 bits (525), Expect = 4e-51
 Identities = 111/210 (52%), Positives = 142/210 (67%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            VT  W+I+QID NNAFLNG++ E+V++ Q  GFI +S P +VCKL K LYGLKQAPRAWF
Sbjct: 372  VTYNWEIRQIDFNNAFLNGEIVETVYLSQLAGFISTSHPQYVCKLQKVLYGLKQAPRAWF 431

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
            +KLK  L +  F++S SD+ LF+ K +G             ITG N+  I  LI+ L ++
Sbjct: 432  HKLKDALHTWRFISSTSDTYLFIYKHNGNFLLLLVYVDDLLITGNNAPLIQTLIQDLHNR 491

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            FALK LG V  FLG E   T+ GL LTQSKY  DLL +T+M + KP  TP+S + KL  +
Sbjct: 492  FALKDLGLVKDFLGFEALHTTTGLHLTQSKYTVDLLTRTNMHSAKPVLTPMSAALKLHAA 551

Query: 97   DSKAFENPTVYRSTIGALQYLTITRPDISF 8
               AF +PT+YRSTIG +QYLT TRPDI+F
Sbjct: 552  SGPAFSDPTLYRSTIGVIQYLTYTRPDIAF 581


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  206 bits (523), Expect = 6e-51
 Identities = 105/214 (49%), Positives = 141/214 (65%), Gaps = 2/214 (0%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V+  W ++Q+DV NAFL+G L E V+M QP GF  SS+P +VCKL+K+LYGLKQAPRAW+
Sbjct: 1035 VSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWY 1094

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
            ++L + LV  GF AS +D+SLF     G             +      A   L+K L  +
Sbjct: 1095 SRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKE 1154

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            FALK LG++ YFLG+EVT+ S G++LTQ KY +DLL + +M NCKP STP+S S KL L 
Sbjct: 1155 FALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLY 1214

Query: 97   DSKAF--ENPTVYRSTIGALQYLTITRPDISFAV 2
            +       +   YRS +GALQYLT+TRPDI+++V
Sbjct: 1215 EGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSV 1248


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  205 bits (521), Expect = 1e-50
 Identities = 106/214 (49%), Positives = 140/214 (65%), Gaps = 2/214 (0%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V+  W ++Q+DV NAFL+G L E V+M QP GF   S+P +VCKL+K+LYGLKQAPRAW+
Sbjct: 1026 VSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQAPRAWY 1085

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
            ++L + LV  GF AS +D+SLF     G             I      A   L+K L  +
Sbjct: 1086 SRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKE 1145

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            FALK LG++ YFLG+EVT+   G+VLTQ KY +DLL + +M NCKP STP+S S KL L 
Sbjct: 1146 FALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLY 1205

Query: 97   DSKAF--ENPTVYRSTIGALQYLTITRPDISFAV 2
            +       + T YRS +GALQYLT+TRPDI+++V
Sbjct: 1206 EGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSV 1239


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  204 bits (518), Expect = 2e-50
 Identities = 103/214 (48%), Positives = 139/214 (64%), Gaps = 2/214 (0%)
 Frame = -2

Query: 637  VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
            V+  W ++Q+DV N FL+G L E V+M QP GF  SS+P +VCKLNK+LYGLKQAPRAW+
Sbjct: 1038 VSRGWSLRQLDVQNDFLHGFLEEEVYMQQPPGFESSSKPDYVCKLNKALYGLKQAPRAWY 1097

Query: 457  NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
            ++L + L   GF AS +D+SLF     G             +      A   L+K L  +
Sbjct: 1098 SRLSKKLTELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKE 1157

Query: 277  FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
            F LK LG++ YFLG+EVT+ S G++LTQ KY +D+L + +M NCKP STP+S S KL L 
Sbjct: 1158 FTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLY 1217

Query: 97   DSKAF--ENPTVYRSTIGALQYLTITRPDISFAV 2
            +       + T YRS +GALQYLT+TRPDI+++V
Sbjct: 1218 EGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSV 1251


>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
          Length = 950

 Score =  204 bits (518), Expect = 2e-50
 Identities = 103/214 (48%), Positives = 140/214 (65%), Gaps = 2/214 (0%)
 Frame = -2

Query: 637 VTNQWKIQQIDVNNAFLNGDLNESVFMFQPEGFIDSSRPTHVCKLNKSLYGLKQAPRAWF 458
           ++  W ++Q+DV N FL+G L E V+M QP GF  SS+P +VCKL+K+LYGLKQA RAW+
Sbjct: 103 ISRGWSLRQLDVQNVFLHGFLQEEVYMQQPPGFESSSKPNYVCKLDKALYGLKQATRAWY 162

Query: 457 NKLKQFLVSQGFVASVSDSSLFLKKADGXXXXXXXXXXXXXITGGNSCAIFELIKLLGDQ 278
           ++L + LV  GF AS +D+SLF     G             +      A   L+K L  +
Sbjct: 163 SRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKE 222

Query: 277 FALKTLGEVSYFLGLEVTRTSGGLVLTQSKYISDLLGKTSMLNCKPTSTPISTSHKLALS 98
           FALK LG++ YFLG+EVT+ S G++LTQ KY +DLL + +M NCKP STP+S S KL L 
Sbjct: 223 FALKDLGDLHYFLGIEVTKVSNGIILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLY 282

Query: 97  DSKAF--ENPTVYRSTIGALQYLTITRPDISFAV 2
           +       + T YRS +GALQYLT+TRPDI+++V
Sbjct: 283 EGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSV 316