BLASTX nr result
ID: Rehmannia24_contig00012934
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00012934
(529 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citr... 89 6e-16
ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloropl... 88 1e-15
ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloropl... 88 1e-15
ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloropl... 86 7e-15
sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c... 86 7e-15
ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloropl... 84 2e-14
ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi... 84 3e-14
ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab... 81 1e-13
ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutr... 81 2e-13
gb|EXC01136.1| 50S ribosomal protein 6 [Morus notabilis] 80 4e-13
gb|EMJ27548.1| hypothetical protein PRUPE_ppa022547mg [Prunus pe... 80 4e-13
gb|EPS64597.1| hypothetical protein M569_10187, partial [Genlise... 79 5e-13
ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Caps... 79 8e-13
ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec... 79 8e-13
ref|XP_002302374.1| plastid-specific ribosomal family protein [P... 79 8e-13
ref|XP_004501081.1| PREDICTED: 50S ribosomal protein 6, chloropl... 78 1e-12
gb|EOY15612.1| Plastid-specific 50S ribosomal protein 6 [Theobro... 77 2e-12
ref|XP_004301446.1| PREDICTED: 50S ribosomal protein 6, chloropl... 77 2e-12
gb|EMJ16314.1| hypothetical protein PRUPE_ppa012953mg [Prunus pe... 77 2e-12
sp|P11892.1|PSRP6_PEA RecName: Full=50S ribosomal protein 6, chl... 75 1e-11
>ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citrus clementina]
gi|557535820|gb|ESR46938.1| hypothetical protein
CICLE_v10002778mg [Citrus clementina]
Length = 149
Score = 89.0 bits (219), Expect = 6e-16
Identities = 54/105 (51%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MS+S+ FGS++VV P+ S+ + GLVIE SSRPQKKAT HHM
Sbjct: 39 MSISSFFGSQIVVVPNLSSKKLGVEGKCNV-----------GLVIENSSRPQKKATAHHM 87
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVSEDT----SAAAP 206
KTRPRKT+P D+ R PTVY P +WSLVS+DT SAAAP
Sbjct: 88 KTRPRKTQPWDVNRKPTVYPPLPPLPPDWSLVSDDTDTDASAAAP 132
>ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Citrus
sinensis]
Length = 111
Score = 88.2 bits (217), Expect = 1e-15
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MS+S+ FGS++VV P+ S+ K ++ V LVIE SSRPQKKAT HHM
Sbjct: 1 MSISSFFGSQIVVVPNLSS--KKLGMEEKCNVG---------LVIENSSRPQKKATAHHM 49
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVSEDT----SAAAP 206
KTRPRKT+P D+ R PTVY P +W+LVS+DT SAAAP
Sbjct: 50 KTRPRKTQPWDVNRKPTVYPPLPPLPPDWTLVSDDTDTDASAAAP 94
>ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Vitis vinifera]
Length = 108
Score = 87.8 bits (216), Expect = 1e-15
Identities = 53/107 (49%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MS+SAIFG+ + S +A+ A RL VIECSSRPQKK T HHM
Sbjct: 1 MSISAIFGAAVPNRCSTAASFGARKAAPRL--------GGGAAVIECSSRPQKKGTSHHM 52
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVSED---TSAAAPPQP 197
KTRPRKT+P DI+R PTVY P EW++VS D + AA PP P
Sbjct: 53 KTRPRKTQPWDIKRRPTVYAPLPPLPPEWTVVSSDADASDAAVPPGP 99
>ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum
tuberosum]
Length = 111
Score = 85.5 bits (210), Expect = 7e-15
Identities = 54/117 (46%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSA---------ATKAAPPPQRLLVXXXXXXXXXGLVIECSSRP 356
MS SAIFG ++VV P S AT+ A P + GLVIECSSRP
Sbjct: 1 MSASAIFGLQMVVLPRSSTVSTTGFTGGATRLAAAPTSV----------GGLVIECSSRP 50
Query: 355 QKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVSEDTSAAAPPQPVQSE 185
QKKAT HH KTRPRKT+ DIRRGP VY P+EWS S+++ A +S+
Sbjct: 51 QKKATAHHKKTRPRKTQAWDIRRGPAVYAPLPPLPSEWSFASDESGQPAAAGASESD 107
>sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
protein 6; Short=PSRP-6; Flags: Precursor
gi|7578927|gb|AAF64189.1|AF245292_1 plastid-specific
ribosomal protein 6 precursor [Spinacia oleracea]
Length = 116
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/99 (47%), Positives = 56/99 (56%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MSVSAIFG+R+V PS + +L + IECSSRPQKK T HHM
Sbjct: 1 MSVSAIFGARVVTIPSVLRTSSVDGRTVKLQPSTGGSCGGGVITIECSSRPQKKGTAHHM 60
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVSEDTSAA 212
KTRP+KT DI+RGP VY PAEW++VS A
Sbjct: 61 KTRPKKTARWDIKRGPAVYPPLPPLPAEWTIVSSAVDEA 99
>ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum
lycopersicum]
Length = 111
Score = 84.3 bits (207), Expect = 2e-14
Identities = 53/117 (45%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSA---------ATKAAPPPQRLLVXXXXXXXXXGLVIECSSRP 356
MS SAIFG ++ V P S AT+ A P + GLVIECSSRP
Sbjct: 1 MSASAIFGLQMAVLPRSSTVSATGFTGGATRLASAPTSI----------GGLVIECSSRP 50
Query: 355 QKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVSEDTSAAAPPQPVQSE 185
QKKAT HH KTRPRKT+ DIRRGP VY P+EWS S+++ A +S+
Sbjct: 51 QKKATAHHKKTRPRKTQAWDIRRGPAVYAPLPPLPSEWSFASDESGQPAAAGASESD 107
>ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana]
gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S
ribosomal protein 6, chloroplastic; AltName: Full=CL25;
AltName: Full=Plastid-specific 50S ribosomal protein 6;
Short=PSRP-6; Flags: Precursor
gi|10177888|dbj|BAB11220.1| unnamed protein product
[Arabidopsis thaliana] gi|14517428|gb|AAK62604.1|
AT5g17870/MPI7_10 [Arabidopsis thaliana]
gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10
[Arabidopsis thaliana] gi|21554906|gb|AAM63726.1|
plastid-specific ribosomal protein 6 precursor
(Psrp-6)-like [Arabidopsis thaliana]
gi|332005097|gb|AED92480.1| plastid-specific 50S
ribosomal protein 6 [Arabidopsis thaliana]
Length = 106
Score = 83.6 bits (205), Expect = 3e-14
Identities = 51/102 (50%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MSVSAIFG+ +V A+P ++ V G+VIECSSRPQKK+T HH
Sbjct: 1 MSVSAIFGTGIVT-------VAASPVLRQFQVPKLGNGGGLGMVIECSSRPQKKSTAHHR 53
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEWS---LVSEDTSAA 212
KTRP+KT+P DI+R PTVY PAEWS L S+D AA
Sbjct: 54 KTRPKKTQPWDIKRKPTVYAPLPPLPAEWSPFTLASDDGGAA 95
>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
Length = 108
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MSVSAIFG+ +V A+P ++ V G+VIECSSRPQKK+T HH
Sbjct: 1 MSVSAIFGTGIVT-------VAASPVLRQFQVPTLGNGGGLGMVIECSSRPQKKSTAHHR 53
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEW---SLVSED--TSAAAP 206
K+RP+KT+P DI+R PTVY PAEW +L S+D +AAAP
Sbjct: 54 KSRPKKTQPWDIKRKPTVYAPLPPLPAEWTPFTLASDDGGATAAAP 99
>ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutrema salsugineum]
gi|557101420|gb|ESQ41783.1| hypothetical protein
EUTSA_v10015071mg [Eutrema salsugineum]
Length = 109
Score = 80.9 bits (198), Expect = 2e-13
Identities = 49/107 (45%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MSVSAIFG+ +V A+P ++ V G+VIECSSRPQKK+T HH
Sbjct: 1 MSVSAIFGTGIVT-------VAASPSLRQFQVPKSGNGGGLGMVIECSSRPQKKSTAHHR 53
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEW---SLVSEDTSAAAPPQP 197
KTRP+KT+P DI+R PTVY P +W +L S+D AA P
Sbjct: 54 KTRPKKTQPWDIKRKPTVYAPLPPLPPDWAPLALSSDDGGAATAASP 100
>gb|EXC01136.1| 50S ribosomal protein 6 [Morus notabilis]
Length = 115
Score = 79.7 bits (195), Expect = 4e-13
Identities = 47/105 (44%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Frame = -1
Query: 508 MSVSAIFGSRLVV------PPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKK 347
MS +A FG+++V P SF+ A K+AP VIECSSRP KK
Sbjct: 1 MSTAAFFGAQIVAVRIPSAPASFAGARKSAP--------WNGGGGGGPAVIECSSRPTKK 52
Query: 346 ATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVSEDTSAA 212
AT HHMKTRP+KT+ DIRR PTVY P +W L D S++
Sbjct: 53 ATAHHMKTRPKKTQAWDIRRKPTVYAPLPPLPPDWVLAGSDDSSS 97
>gb|EMJ27548.1| hypothetical protein PRUPE_ppa022547mg [Prunus persica]
Length = 67
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Frame = -1
Query: 379 VIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVS--EDTSAAAP 206
+IECSSRPQKKAT HH KTRPRKT+P D++R PTVY PA+W+LVS ++ S+++P
Sbjct: 1 MIECSSRPQKKATAHHRKTRPRKTQPWDVKRKPTVYTPLPPLPADWTLVSSADEASSSSP 60
Query: 205 PQPVQSE 185
+P +E
Sbjct: 61 QEPPTTE 67
>gb|EPS64597.1| hypothetical protein M569_10187, partial [Genlisea aurea]
Length = 57
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/51 (78%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -1
Query: 382 LVIECSSRPQKKATKHHMKTRPRKTRPSDI-RRGPTVYXXXXXXPAEWSLV 233
LVIECSSRP+KKATKHHMKTRPRKT PSDI RRGPT Y P EWSLV
Sbjct: 7 LVIECSSRPEKKATKHHMKTRPRKTNPSDIRRRGPTAYPTLPVLPPEWSLV 57
>ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Capsella rubella]
gi|482557644|gb|EOA21836.1| hypothetical protein
CARUB_v10002303mg [Capsella rubella]
Length = 109
Score = 78.6 bits (192), Expect = 8e-13
Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MSVSAIFG+ +V ++P ++ V G+VIECSSRPQKK+T HH
Sbjct: 1 MSVSAIFGTGIVT------VAASSPVLRQFQVPKLGNGGGLGMVIECSSRPQKKSTAHHR 54
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEW---SLVSEDTSAAA 209
K+RP+K++P DI+R PTVY PAEW +L S+D A A
Sbjct: 55 KSRPKKSQPWDIKRKPTVYAPLPPLPAEWTPFTLASDDGGATA 97
>ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative
[Ricinus communis] gi|223550719|gb|EEF52205.1| 50S
ribosomal protein CL25, chloroplast precursor, putative
[Ricinus communis]
Length = 126
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/93 (48%), Positives = 55/93 (59%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHM 329
MS+S+IFGS +V+ S GLVIECSSRP+KKAT HHM
Sbjct: 1 MSISSIFGSPVVLLSKASLKQLNVEVKSAPKTATGNGWYSGGLVIECSSRPKKKATAHHM 60
Query: 328 KTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVS 230
KTRP+K++P DIRR PTVY P +W+LVS
Sbjct: 61 KTRPKKSQPWDIRRKPTVYPPLPPLPPDWTLVS 93
>ref|XP_002302374.1| plastid-specific ribosomal family protein [Populus trichocarpa]
gi|118486925|gb|ABK95296.1| unknown [Populus
trichocarpa] gi|222844100|gb|EEE81647.1|
plastid-specific ribosomal family protein [Populus
trichocarpa]
Length = 123
Score = 78.6 bits (192), Expect = 8e-13
Identities = 46/94 (48%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = -1
Query: 508 MSVSAIFGSRLVVPPSFSAATKAAPPPQRL-LVXXXXXXXXXGLVIECSSRPQKKATKHH 332
MSVS+IFGS ++ P S P V G+ IECSSRPQKKAT HH
Sbjct: 1 MSVSSIFGSPFLLAPKPSTTPSFKPVNGEFKTVPIGTGFGHGGMSIECSSRPQKKATAHH 60
Query: 331 MKTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVS 230
KTRPRK++P DI+R PTVY P +W+LVS
Sbjct: 61 RKTRPRKSQPWDIKRKPTVYAPLPPLPPDWTLVS 94
>ref|XP_004501081.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Cicer
arietinum]
Length = 103
Score = 78.2 bits (191), Expect = 1e-12
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Frame = -1
Query: 505 SVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHMK 326
SVS+IFG + + P+ S K+ +R GL+IECSSRPQKK+T HHM+
Sbjct: 3 SVSSIFGCGVAIAPN-SVKNKSIRIERR--------NACGGLLIECSSRPQKKSTAHHMQ 53
Query: 325 TRPRKTRPSDIRRGPTVYXXXXXXPAEWSLV---SEDTSAAAPPQPVQS 188
TRPRK++PSD R PTVY P +W++V T+ APP P S
Sbjct: 54 TRPRKSQPSDRNRKPTVYAPLPPLPPDWTVVITADASTAPVAPPPPTPS 102
>gb|EOY15612.1| Plastid-specific 50S ribosomal protein 6 [Theobroma cacao]
Length = 121
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/51 (74%), Positives = 41/51 (80%)
Frame = -1
Query: 382 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVS 230
LVIECSSRPQKKATKHHMKTRPRKT+ DIRR PTVY P +W+LVS
Sbjct: 40 LVIECSSRPQKKATKHHMKTRPRKTQAWDIRRKPTVYAPLPPLPPDWTLVS 90
>ref|XP_004301446.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 114
Score = 77.4 bits (189), Expect = 2e-12
Identities = 57/119 (47%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Frame = -1
Query: 508 MSVSAIF-GSRLV---VP---PSFSAA---TKAAPPPQRLLVXXXXXXXXXGLVIECSSR 359
MSVSA+ G +L+ VP PS A+ T+ APP GLVIECSSR
Sbjct: 1 MSVSAVMLGPQLLSMPVPLRNPSAKASFGLTQMAPP---------LCGGSTGLVIECSSR 51
Query: 358 PQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXPAEW-SLVSEDTSAAAPPQPVQSE 185
PQKKAT HH KTRPRKT D++R PTVY PA+W L S D ++AA P P Q +
Sbjct: 52 PQKKATAHHRKTRPRKTAAWDVKRKPTVYAPLPPLPADWVFLNSSDDASAADPSPPQEQ 110
>gb|EMJ16314.1| hypothetical protein PRUPE_ppa012953mg [Prunus persica]
Length = 148
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/68 (55%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Frame = -1
Query: 382 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXPAEWSLVS--EDTSAAA 209
L+IE SSRPQKKAT HH KTRPRKT+P D++R PTVY PA+W+LVS ++ S+++
Sbjct: 32 LMIEYSSRPQKKATAHHRKTRPRKTQPWDVKRKPTVYTLLPPLPADWTLVSSADEASSSS 91
Query: 208 PPQPVQSE 185
P +P +E
Sbjct: 92 PKEPPTTE 99
>sp|P11892.1|PSRP6_PEA RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
protein 6; Short=PSRP-6; Flags: Precursor
gi|20877|emb|CAA32187.1| unnamed protein product [Pisum
sativum]
Length = 104
Score = 74.7 bits (182), Expect = 1e-11
Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = -1
Query: 505 SVSAIFGSRLVVPPSFSAATKAAPPPQRLLVXXXXXXXXXGLVIECSSRPQKKATKHHMK 326
SVS+IFG + + P+ S KA +R GL+IECSSRPQKK+T HHMK
Sbjct: 3 SVSSIFGCGVSMAPNSSLRNKAIRTERR--------SACGGLLIECSSRPQKKSTAHHMK 54
Query: 325 TRPRKTRPSDIRRGPTVYXXXXXXPAEWSLV---SEDTSAAAPPQPVQSE 185
TRPRK+R SD R PTVY P ++++V T PP P S+
Sbjct: 55 TRPRKSRLSDRNRKPTVYAPLPPLPPDFTIVIPADASTVDFTPPPPTPSD 104