BLASTX nr result

ID: Rehmannia24_contig00012706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00012706
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238874.1| PREDICTED: sec-independent protein transloca...    89   6e-16
ref|XP_006344197.1| PREDICTED: sec-independent protein transloca...    87   3e-15

>ref|XP_004238874.1| PREDICTED: sec-independent protein translocase protein TATC,
           chloroplastic-like [Solanum lycopersicum]
          Length = 351

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 51/102 (50%), Positives = 66/102 (64%)
 Frame = -2

Query: 311 MGSTGALFYNPNLNSNTLCFQCLNSNTRPSRTILRVNQIKPKLPGFSNKNTFKKFRRIVC 132
           MGS+ AL  N +L + T CF+CLNS     RT L +N  +PKL   S++   KKF R+VC
Sbjct: 1   MGSSSALISNLHL-TQTNCFKCLNS-----RTSLNINPTRPKL-NLSSRKCIKKFSRLVC 53

Query: 131 SAVEDVTDKQREINGGSLNGAGPAAEDRLDSSDGASKNPFLN 6
           SAVED  +KQREI+G + +  G A EDR D  DG+SK+ F N
Sbjct: 54  SAVEDSMEKQREISGANASSLGSAVEDRPDVGDGSSKSLFKN 95


>ref|XP_006344197.1| PREDICTED: sec-independent protein translocase protein TATC,
           chloroplastic-like [Solanum tuberosum]
          Length = 351

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 50/102 (49%), Positives = 66/102 (64%)
 Frame = -2

Query: 311 MGSTGALFYNPNLNSNTLCFQCLNSNTRPSRTILRVNQIKPKLPGFSNKNTFKKFRRIVC 132
           MGS+ AL  N +L + T CF+CLNS     RT L +N  +PKL   S++   KKF R+VC
Sbjct: 1   MGSSSALISNLHL-TQTHCFKCLNS-----RTSLNINPARPKL-NLSSRKYIKKFSRLVC 53

Query: 131 SAVEDVTDKQREINGGSLNGAGPAAEDRLDSSDGASKNPFLN 6
           SAVED  +KQREI+G + +  G A EDR D  DG+S++ F N
Sbjct: 54  SAVEDSIEKQREISGANASSLGSALEDRPDVGDGSSESIFKN 95


Top